[9051] | 1 | #region License Information
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| 2 | /* HeuristicLab
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| 3 | * Copyright (C) 2002-2012 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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| 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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| 22 | using System;
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[9067] | 23 | using System.Collections.Generic;
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[9051] | 24 | using System.Linq;
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| 25 | using HeuristicLab.Algorithms.GeneticAlgorithm;
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| 26 | using HeuristicLab.Common;
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| 27 | using HeuristicLab.Core;
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| 28 | using HeuristicLab.Data;
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[10177] | 29 | using HeuristicLab.Operators;
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[9077] | 30 | using HeuristicLab.Optimization;
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[9051] | 31 | using HeuristicLab.Parameters;
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| 32 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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| 33 | using HeuristicLab.Problems.DataAnalysis.Symbolic;
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| 34 |
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| 35 | namespace HeuristicLab.Algorithms.DataAnalysis.Symbolic {
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[10142] | 36 | [Item("Symbolic Data Analysis Island Genetic Algorithm", "A symbolic data analysis island genetic algorithm.")]
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[9182] | 37 | [Creatable("Data Analysis")]
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[9051] | 38 | [StorableClass]
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[9067] | 39 | public sealed class SymbolicDataAnalysisIslandGeneticAlgorithm : IslandGeneticAlgorithm {
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| 40 | private const string FixedSamplesParameterName = "NumberOfFixedSamples";
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[9077] | 41 | private const string FixedSamplesPartitionParameterName = "FixedSamplesPartition";
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[9067] | 42 | private const string FixedSamplesPartitionsParameterName = "FixedSamplesPartitions";
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[9077] | 43 | private const string EvaluatorParameterName = "IslandEvaluator";
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[10177] | 44 | private const string IslandIndexParameterName = "IslandIndex";
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[9077] | 45 | private const string ProblemEvaluatorParameterName = "ProblemEvaluator";
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[9051] | 46 |
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| 47 | #region Problem Properties
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| 48 | public override Type ProblemType {
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| 49 | get { return typeof(ISymbolicDataAnalysisSingleObjectiveProblem); }
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| 50 | }
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| 51 | public new ISymbolicDataAnalysisSingleObjectiveProblem Problem {
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| 52 | get { return (ISymbolicDataAnalysisSingleObjectiveProblem)base.Problem; }
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| 53 | set { base.Problem = value; }
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| 54 | }
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| 55 | #endregion
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| 56 |
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[9067] | 57 | #region parameters
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[10353] | 58 | public IFixedValueParameter<PercentValue> FixedSamplesParameter {
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| 59 | get { return (IFixedValueParameter<PercentValue>)Parameters[FixedSamplesParameterName]; }
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[9051] | 60 | }
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[9067] | 61 | public IValueParameter<ItemArray<IntRange>> FixedSamplesPartitionsParameter {
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| 62 | get { return (IValueParameter<ItemArray<IntRange>>)Parameters[FixedSamplesPartitionsParameterName]; }
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[9051] | 63 | }
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[10177] | 64 | public IValueParameter<ISymbolicDataAnalysisIslandGeneticAlgorithmEvaluator> EvaluatorParameter {
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| 65 | get { return (IValueParameter<ISymbolicDataAnalysisIslandGeneticAlgorithmEvaluator>)Parameters[EvaluatorParameterName]; }
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[9051] | 66 | }
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[9077] | 67 | private ILookupParameter<ISingleObjectiveEvaluator> ProblemEvaluatorParameter {
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| 68 | get { return (ILookupParameter<ISingleObjectiveEvaluator>)Parameters[ProblemEvaluatorParameterName]; }
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| 69 | }
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[9051] | 70 | #endregion
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| 71 |
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[9067] | 72 | #region properties
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[10353] | 73 | public double FixedSamples {
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[9067] | 74 | get { return FixedSamplesParameter.Value.Value; }
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| 75 | set { FixedSamplesParameter.Value.Value = value; }
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[9051] | 76 | }
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[9067] | 77 | public ItemArray<IntRange> FixedSamplesPartitions {
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| 78 | get { return FixedSamplesPartitionsParameter.Value; }
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| 79 | set { FixedSamplesPartitionsParameter.Value = value; }
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[9051] | 80 | }
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[10357] | 81 |
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| 82 | private readonly ScopeTreeAssigner<IntValue> islandIndexAssigner;
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[9051] | 83 | #endregion
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| 84 |
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| 85 | [StorableConstructor]
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| 86 | private SymbolicDataAnalysisIslandGeneticAlgorithm(bool deserializing) : base(deserializing) { }
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| 87 | [StorableHook(HookType.AfterDeserialization)]
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| 88 | private void AfterDeserialization() {
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[9067] | 89 | RegisterParameterEvents();
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[9051] | 90 | }
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| 91 | private SymbolicDataAnalysisIslandGeneticAlgorithm(SymbolicDataAnalysisIslandGeneticAlgorithm original, Cloner cloner)
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| 92 | : base(original, cloner) {
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[9067] | 93 | RegisterParameterEvents();
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[9051] | 94 | }
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| 95 | public override IDeepCloneable Clone(Cloner cloner) {
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| 96 | return new SymbolicDataAnalysisIslandGeneticAlgorithm(this, cloner);
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| 97 | }
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| 98 |
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| 99 | public SymbolicDataAnalysisIslandGeneticAlgorithm()
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| 100 | : base() {
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[10353] | 101 | Parameters.Add(new FixedValueParameter<PercentValue>(FixedSamplesParameterName, "The number of fixed samples used for fitness calculation in each island.", new PercentValue(0.2)));
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[9067] | 102 | Parameters.Add(new ValueParameter<ItemArray<IntRange>>(FixedSamplesPartitionsParameterName, "The fixed samples partitions used for fitness calculation for every island."));
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[10177] | 103 | Parameters.Add(new OptionalValueParameter<ISymbolicDataAnalysisIslandGeneticAlgorithmEvaluator>(EvaluatorParameterName, "The evaluator of the algorithm."));
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[9077] | 104 | Parameters.Add(new LookupParameter<ISingleObjectiveEvaluator>(ProblemEvaluatorParameterName, "Internal parameter for name translation", "Evaluator"));
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[9051] | 105 |
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[10357] | 106 | islandIndexAssigner = new ScopeTreeAssigner<IntValue>();
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[10177] | 107 | islandIndexAssigner.Name = "Insert island index";
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| 108 | islandIndexAssigner.LeftSideParameter.ActualName = IslandIndexParameterName;
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| 109 | var readonlyIslandIndexes = Enumerable.Range(0, NumberOfIslands.Value).Select(x => (IntValue)new IntValue(x).AsReadOnly());
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| 110 | islandIndexAssigner.RightSideParameter.Value = new ItemArray<IntValue>(readonlyIslandIndexes);
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| 111 |
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[9077] | 112 | ScopeTreeAssigner<IntRange> fixedSamplesPartitionCreator = new ScopeTreeAssigner<IntRange>();
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[10142] | 113 | fixedSamplesPartitionCreator.Name = "Create fixed evaluation partition";
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[9077] | 114 | fixedSamplesPartitionCreator.LeftSideParameter.ActualName = FixedSamplesPartitionParameterName;
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| 115 | fixedSamplesPartitionCreator.RightSideParameter.ActualName = FixedSamplesPartitionsParameterName;
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| 116 |
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[10177] | 117 | SubScopesCreator insertionPoint = OperatorGraph.Iterate().OfType<SubScopesCreator>().First();
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| 118 | islandIndexAssigner.Successor = fixedSamplesPartitionCreator;
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[9077] | 119 | fixedSamplesPartitionCreator.Successor = insertionPoint.Successor;
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[10177] | 120 | insertionPoint.Successor = islandIndexAssigner;
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[9077] | 121 |
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[10591] | 122 | ReevaluateImmigrants = true;
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| 123 | ReevaluteElites = true;
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[10177] | 124 |
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[9067] | 125 | RegisterParameterEvents();
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| 126 | RecalculateFixedSamplesPartitions();
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| 127 | }
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[9051] | 128 |
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[9172] | 129 | private void RegisterParameterEvents() {
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| 130 | if (Problem != null) Problem.FitnessCalculationPartition.ValueChanged += Problem_Reset;
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| 131 | NumberOfIslandsParameter.ValueChanged += NumberOfIslandsParameter_ValueChanged;
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[10357] | 132 | NumberOfIslandsParameter.Value.ValueChanged += (o, ev) => NumberOfIslandsParameterValue_Changed();
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[10156] | 133 | FixedSamplesParameter.Value.ValueChanged += (o, e) => {
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| 134 | RecalculateFixedSamplesPartitions();
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[10230] | 135 | ReevaluateImmigrants = FixedSamples < Problem.FitnessCalculationPartition.Size;
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[10156] | 136 | };
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[9172] | 137 | Analyzer.Operators.PropertyChanged += (o, e) => ParameterizeAnalyzers();
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[10156] | 138 | EvaluatorParameter.ValueChanged += (o, e) => ParameterizeEvaluator();
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[9172] | 139 | }
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| 140 |
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[9077] | 141 | protected override void ParameterizeSolutionsCreator() {
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| 142 | base.ParameterizeSolutionsCreator();
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| 143 | SolutionsCreator.EvaluatorParameter.ActualName = EvaluatorParameterName;
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| 144 | }
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| 145 |
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| 146 | protected override void ParameterizeMainLoop() {
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| 147 | base.ParameterizeMainLoop();
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| 148 | MainLoop.EvaluatorParameter.ActualName = EvaluatorParameterName;
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| 149 | MainLoop.QualityParameter.ActualName = EvaluatorParameter.Value.QualityParameter.ActualName;
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| 150 | }
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| 151 |
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[10142] | 152 | protected override void ParameterizeAnalyzers() {
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| 153 | base.ParameterizeAnalyzers();
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[9172] | 154 | foreach (var analyzer in Analyzer.Operators.OfType<ISymbolicDataAnalysisAnalyzer>()) {
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| 155 | IParameter evaluatorParameter;
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| 156 | if (analyzer.Parameters.TryGetValue("Evaluator", out evaluatorParameter)) {
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| 157 | ILookupParameter param = evaluatorParameter as ILookupParameter;
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| 158 | if (evaluatorParameter != null) param.ActualName = ProblemEvaluatorParameterName;
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| 159 | }
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| 160 | }
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[9067] | 161 | }
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[9051] | 162 |
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[10156] | 163 | private void ParameterizeEvaluator() {
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| 164 | var evaluator = EvaluatorParameter.Value;
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[10230] | 165 | evaluator.IterationsParameter.ActualName = "Generations";
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| 166 | evaluator.MaximumIterationsParameter.ActualName = MaximumGenerationsParameter.Name;
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| 167 | evaluator.DataMigrationIntervalParameter.ActualName = MigrationIntervalParameter.Name;
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[10177] | 168 |
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[10230] | 169 | ParameterizeStochasticOperatorForIsland(evaluator);
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[10156] | 170 | }
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| 171 |
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[9067] | 172 | private void NumberOfIslandsParameter_ValueChanged(object sender, EventArgs e) {
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[10357] | 173 | NumberOfIslands.ValueChanged += (o, ev) => NumberOfIslandsParameterValue_Changed();
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| 174 | NumberOfIslandsParameterValue_Changed();
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| 175 | }
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| 176 | private void NumberOfIslandsParameterValue_Changed() {
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| 177 | var readonlyIslandIndexes = Enumerable.Range(0, NumberOfIslands.Value).Select(x => (IntValue)new IntValue(x).AsReadOnly());
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| 178 | islandIndexAssigner.RightSideParameter.Value = new ItemArray<IntValue>(readonlyIslandIndexes);
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[9067] | 179 | RecalculateFixedSamplesPartitions();
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[9051] | 180 | }
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| 181 |
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[10356] | 182 | protected override void Problem_Reset(object sender, EventArgs e) {
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| 183 | base.Problem_Reset(sender, e);
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| 184 | RecalculateFixedSamplesPartitions();
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| 185 | }
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| 186 |
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[9051] | 187 | protected override void OnProblemChanged() {
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[9172] | 188 | Problem.FitnessCalculationPartition.ValueChanged += Problem_Reset;
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[9077] | 189 |
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[10156] | 190 | if (Problem != null && EvaluatorParameter.Value == null) {
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[10177] | 191 | EvaluatorParameter.Value = new RandomSamplesEvaluator();
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[10156] | 192 | } else if (Problem == null)
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[9077] | 193 | EvaluatorParameter.Value = null;
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| 194 |
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[10156] | 195 | ParameterizeStochasticOperator(EvaluatorParameter.Value);
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[9067] | 196 | RecalculateFixedSamplesPartitions();
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[9077] | 197 | base.OnProblemChanged();
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[9051] | 198 | }
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| 199 |
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[9067] | 200 | private void RecalculateFixedSamplesPartitions() {
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| 201 | if (Problem == null) {
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| 202 | FixedSamplesPartitions = new ItemArray<IntRange>(Enumerable.Repeat(new IntRange(), NumberOfIslands.Value));
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| 203 | return;
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| 204 | }
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| 205 | var samplesStart = Problem.FitnessCalculationPartition.Start;
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| 206 | var samplesEnd = Problem.FitnessCalculationPartition.End;
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| 207 | var totalSamples = Problem.FitnessCalculationPartition.Size;
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[10353] | 208 | var fixedSamples = (int)(FixedSamples * totalSamples);
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[9067] | 209 | var islands = NumberOfIslands.Value;
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[9051] | 210 |
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[10353] | 211 | double shift = (double)((totalSamples - fixedSamples)) / (islands - 1);
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| 212 | int offset = (int)Math.Floor(shift);
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| 213 | double remainder = shift - offset;
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| 214 |
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[9067] | 215 | List<IntRange> partitions = new List<IntRange>();
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| 216 | for (int i = 0; i < islands; i++) {
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[10353] | 217 | var partitionStart = samplesStart + offset * i + (int)(remainder * i);
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[9067] | 218 | partitions.Add(new IntRange(partitionStart, partitionStart + fixedSamples));
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[9051] | 219 | }
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[9067] | 220 |
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[10353] | 221 | //if the last partitions exceeds the allowed samples move the last partition forward.
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[9067] | 222 | int exceedsSamples = partitions[partitions.Count - 1].End - samplesEnd;
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| 223 | if (exceedsSamples > 0) {
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| 224 | partitions[partitions.Count - 1].Start -= exceedsSamples;
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| 225 | partitions[partitions.Count - 1].End -= exceedsSamples;
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[9051] | 226 | }
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[9067] | 227 | FixedSamplesPartitions = new ItemArray<IntRange>(partitions);
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[9051] | 228 | }
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| 229 |
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| 230 | }
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| 231 | }
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