1 | using System;
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2 | using System.Collections.Generic;
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3 | using System.Linq;
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4 | using System.Text;
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5 | using HeuristicLab.Core;
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6 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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7 | using HeuristicLab.Optimization;
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8 | using HeuristicLab.Common;
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9 | using HeuristicLab.Parameters;
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10 | using HeuristicLab.Data;
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11 | using HeuristicLab.Analysis;
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12 | using HeuristicLab.Optimization.Operators;
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13 | using HeuristicLab.Operators;
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14 | using HeuristicLab.PluginInfrastructure;
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15 | using HeuristicLab.Random;
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16 |
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17 | namespace HeuristicLab.Algorithms.CellularGeneticAlgorithm {
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18 | /// <summary>
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19 | /// A genetic algorithm.
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20 | /// </summary>
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21 | [Item("Cellular Genetic Algorithm", "A cellular genetic algorithm.")]
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22 | [Creatable("Algorithms")]
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23 | [StorableClass]
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24 | public sealed class CellularGeneticAlgorithm : HeuristicOptimizationEngineAlgorithm, IStorableContent {
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25 | public string Filename { get; set; }
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26 |
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27 | #region Problem Properties
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28 | public override Type ProblemType {
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29 | get { return typeof(ISingleObjectiveHeuristicOptimizationProblem); }
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30 | }
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31 | public new ISingleObjectiveHeuristicOptimizationProblem Problem {
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32 | get { return (ISingleObjectiveHeuristicOptimizationProblem)base.Problem; }
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33 | set { base.Problem = value; }
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34 | }
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35 | #endregion
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36 |
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37 | #region Parameter Properties
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38 | private ValueParameter<IntValue> SeedParameter {
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39 | get { return (ValueParameter<IntValue>)Parameters["Seed"]; }
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40 | }
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41 | private ValueParameter<BoolValue> SetSeedRandomlyParameter {
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42 | get { return (ValueParameter<BoolValue>)Parameters["SetSeedRandomly"]; }
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43 | }
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44 | private ValueParameter<IntValue> PopulationSizeParameter {
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45 | get { return (ValueParameter<IntValue>)Parameters["PopulationSize"]; }
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46 | }
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47 | public ConstrainedValueParameter<ISelector> SelectorParameter {
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48 | get { return (ConstrainedValueParameter<ISelector>)Parameters["Selector"]; }
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49 | }
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50 | public ConstrainedValueParameter<ICrossover> CrossoverParameter {
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51 | get { return (ConstrainedValueParameter<ICrossover>)Parameters["Crossover"]; }
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52 | }
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53 | private ValueParameter<PercentValue> MutationProbabilityParameter {
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54 | get { return (ValueParameter<PercentValue>)Parameters["MutationProbability"]; }
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55 | }
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56 | public OptionalConstrainedValueParameter<IManipulator> MutatorParameter {
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57 | get { return (OptionalConstrainedValueParameter<IManipulator>)Parameters["Mutator"]; }
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58 | }
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59 | private ValueParameter<MultiAnalyzer> AnalyzerParameter {
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60 | get { return (ValueParameter<MultiAnalyzer>)Parameters["Analyzer"]; }
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61 | }
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62 | private ValueParameter<NeighborhoodSelector> NeighborhoodSelectorParameter {
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63 | get { return (ValueParameter<NeighborhoodSelector>)Parameters["NeighborhoodSelector"]; }
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64 | }
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65 | private ValueParameter<IntValue> MaximumGenerationsParameter {
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66 | get { return (ValueParameter<IntValue>)Parameters["MaximumGenerations"]; }
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67 | }
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68 | #endregion
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69 |
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70 | #region Properties
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71 | public IntValue Seed {
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72 | get { return SeedParameter.Value; }
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73 | set { SeedParameter.Value = value; }
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74 | }
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75 | public BoolValue SetSeedRandomly {
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76 | get { return SetSeedRandomlyParameter.Value; }
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77 | set { SetSeedRandomlyParameter.Value = value; }
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78 | }
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79 | public IntValue PopulationSize {
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80 | get { return PopulationSizeParameter.Value; }
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81 | set { PopulationSizeParameter.Value = value; }
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82 | }
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83 | public ISelector Selector {
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84 | get { return SelectorParameter.Value; }
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85 | set { SelectorParameter.Value = value; }
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86 | }
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87 | public ICrossover Crossover {
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88 | get { return CrossoverParameter.Value; }
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89 | set { CrossoverParameter.Value = value; }
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90 | }
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91 | public PercentValue MutationProbability {
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92 | get { return MutationProbabilityParameter.Value; }
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93 | set { MutationProbabilityParameter.Value = value; }
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94 | }
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95 | public IManipulator Mutator {
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96 | get { return MutatorParameter.Value; }
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97 | set { MutatorParameter.Value = value; }
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98 | }
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99 | public MultiAnalyzer Analyzer {
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100 | get { return AnalyzerParameter.Value; }
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101 | set { AnalyzerParameter.Value = value; }
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102 | }
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103 | public NeighborhoodSelector NeighborhoodSelector {
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104 | get { return NeighborhoodSelectorParameter.Value; }
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105 | set { NeighborhoodSelectorParameter.Value = value; }
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106 | }
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107 | public IntValue MaximumGenerations {
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108 | get { return MaximumGenerationsParameter.Value; }
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109 | set { MaximumGenerationsParameter.Value = value; }
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110 | }
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111 | private RandomCreator RandomCreator {
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112 | get { return (RandomCreator)OperatorGraph.InitialOperator; }
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113 | }
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114 | private SolutionsCreator SolutionsCreator {
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115 | get { return (SolutionsCreator)RandomCreator.Successor; }
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116 | }
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117 | private CellularGeneticAlgorithmMainLoop GeneticAlgorithmMainLoop {
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118 | get { return FindMainLoop(SolutionsCreator.Successor); }
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119 | }
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120 | [Storable]
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121 | private BestAverageWorstQualityAnalyzer qualityAnalyzer;
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122 | #endregion
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123 |
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124 | public CellularGeneticAlgorithm()
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125 | : base() {
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126 | Parameters.Add(new ValueParameter<IntValue>("Seed", "The random seed used to initialize the new pseudo random number generator.", new IntValue(0)));
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127 | Parameters.Add(new ValueParameter<BoolValue>("SetSeedRandomly", "True if the random seed should be set to a random value, otherwise false.", new BoolValue(true)));
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128 | Parameters.Add(new ValueParameter<IntValue>("PopulationSize", "The size of the population of solutions.", new IntValue(100)));
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129 | Parameters.Add(new ConstrainedValueParameter<ISelector>("Selector", "The operator used to select solutions for reproduction."));
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130 | Parameters.Add(new ConstrainedValueParameter<ICrossover>("Crossover", "The operator used to cross solutions."));
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131 | Parameters.Add(new ValueParameter<PercentValue>("MutationProbability", "The probability that the mutation operator is applied on a solution.", new PercentValue(0.05)));
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132 | Parameters.Add(new OptionalConstrainedValueParameter<IManipulator>("Mutator", "The operator used to mutate solutions."));
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133 | Parameters.Add(new ValueParameter<MultiAnalyzer>("Analyzer", "The operator used to analyze each generation.", new MultiAnalyzer()));
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134 | Parameters.Add(new ValueParameter<NeighborhoodSelector>("NeighborhoodSelector", "The neighborhood selector.", new VonNeumannNeighborhoodSelector()));
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135 | Parameters.Add(new ValueParameter<IntValue>("MaximumGenerations", "The maximum number of generations which should be processed.", new IntValue(1000)));
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136 |
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137 | RandomCreator randomCreator = new RandomCreator();
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138 | SolutionsCreator solutionsCreator = new SolutionsCreator();
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139 | SubScopesCounter subScopesCounter = new SubScopesCounter();
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140 | ResultsCollector resultsCollector = new ResultsCollector();
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141 | CellularGeneticAlgorithmMainLoop mainLoop = new CellularGeneticAlgorithmMainLoop();
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142 | OperatorGraph.InitialOperator = randomCreator;
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143 |
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144 | randomCreator.RandomParameter.ActualName = "Random";
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145 | randomCreator.SeedParameter.ActualName = SeedParameter.Name;
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146 | randomCreator.SeedParameter.Value = null;
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147 | randomCreator.SetSeedRandomlyParameter.ActualName = SetSeedRandomlyParameter.Name;
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148 | randomCreator.SetSeedRandomlyParameter.Value = null;
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149 | randomCreator.Successor = solutionsCreator;
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150 |
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151 | solutionsCreator.NumberOfSolutionsParameter.ActualName = PopulationSizeParameter.Name;
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152 | solutionsCreator.Successor = resultsCollector;/*subScopesCounter;
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153 |
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154 | subScopesCounter.Name = "Initialize EvaluatedSolutions";
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155 | subScopesCounter.ValueParameter.ActualName = "EvaluatedSolutions";
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156 | subScopesCounter.Successor = resultsCollector;*/
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157 |
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158 | resultsCollector.CollectedValues.Add(new LookupParameter<IntValue>("Evaluated Solutions", null, "EvaluatedSolutions"));
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159 | resultsCollector.ResultsParameter.ActualName = "Results";
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160 | resultsCollector.Successor = mainLoop;
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161 |
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162 | mainLoop.SelectorParameter.ActualName = SelectorParameter.Name;
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163 | mainLoop.CrossoverParameter.ActualName = CrossoverParameter.Name;
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164 | mainLoop.MaximumGenerationsParameter.ActualName = MaximumGenerationsParameter.Name;
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165 | mainLoop.MutatorParameter.ActualName = MutatorParameter.Name;
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166 | mainLoop.MutationProbabilityParameter.ActualName = MutationProbabilityParameter.Name;
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167 | mainLoop.RandomParameter.ActualName = RandomCreator.RandomParameter.ActualName;
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168 | mainLoop.AnalyzerParameter.ActualName = AnalyzerParameter.Name;
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169 | mainLoop.EvaluatedSolutionsParameter.ActualName = "EvaluatedSolutions";
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170 | mainLoop.PopulationSizeParameter.ActualName = PopulationSizeParameter.Name;
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171 | mainLoop.ResultsParameter.ActualName = "Results";
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172 |
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173 | foreach (ISelector selector in ApplicationManager.Manager.GetInstances<ISelector>().Where(x => !(x is IMultiObjectiveSelector)).OrderBy(x => x.Name))
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174 | SelectorParameter.ValidValues.Add(selector);
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175 | ISelector proportionalSelector = SelectorParameter.ValidValues.FirstOrDefault(x => x.GetType().Name.Equals("ProportionalSelector"));
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176 | if (proportionalSelector != null) SelectorParameter.Value = proportionalSelector;
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177 | ParameterizeSelectors();
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178 |
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179 | qualityAnalyzer = new BestAverageWorstQualityAnalyzer();
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180 | ParameterizeAnalyzers();
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181 | UpdateAnalyzers();
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182 |
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183 | Initialize();
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184 | }
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185 | [StorableConstructor]
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186 | private CellularGeneticAlgorithm(bool deserializing) : base(deserializing) { }
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187 | [StorableHook(HookType.AfterDeserialization)]
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188 | private void AfterDeserialization() {
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189 | Initialize();
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190 | }
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191 |
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192 | private CellularGeneticAlgorithm(CellularGeneticAlgorithm original, Cloner cloner)
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193 | : base(original, cloner) {
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194 | qualityAnalyzer = cloner.Clone(original.qualityAnalyzer);
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195 | Initialize();
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196 | }
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197 | public override IDeepCloneable Clone(Cloner cloner) {
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198 | return new CellularGeneticAlgorithm(this, cloner);
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199 | }
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200 |
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201 | public override void Prepare() {
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202 | if (Problem != null) base.Prepare();
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203 | }
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204 |
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205 | #region Events
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206 | protected override void OnProblemChanged() {
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207 | ParameterizeStochasticOperator(Problem.SolutionCreator);
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208 | ParameterizeStochasticOperator(Problem.Evaluator);
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209 | foreach (IOperator op in Problem.Operators) ParameterizeStochasticOperator(op);
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210 | ParameterizeSolutionsCreator();
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211 | ParameterizeGeneticAlgorithmMainLoop();
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212 | ParameterizeSelectors();
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213 | ParameterizeAnalyzers();
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214 | ParameterizeIterationBasedOperators();
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215 | UpdateCrossovers();
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216 | UpdateMutators();
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217 | UpdateAnalyzers();
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218 | Problem.Evaluator.QualityParameter.ActualNameChanged += new EventHandler(Evaluator_QualityParameter_ActualNameChanged);
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219 | base.OnProblemChanged();
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220 | }
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221 |
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222 | protected override void Problem_SolutionCreatorChanged(object sender, EventArgs e) {
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223 | ParameterizeStochasticOperator(Problem.SolutionCreator);
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224 | ParameterizeSolutionsCreator();
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225 | base.Problem_SolutionCreatorChanged(sender, e);
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226 | }
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227 | protected override void Problem_EvaluatorChanged(object sender, EventArgs e) {
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228 | ParameterizeStochasticOperator(Problem.Evaluator);
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229 | ParameterizeSolutionsCreator();
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230 | ParameterizeGeneticAlgorithmMainLoop();
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231 | ParameterizeSelectors();
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232 | ParameterizeAnalyzers();
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233 | Problem.Evaluator.QualityParameter.ActualNameChanged += new EventHandler(Evaluator_QualityParameter_ActualNameChanged);
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234 | base.Problem_EvaluatorChanged(sender, e);
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235 | }
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236 | protected override void Problem_OperatorsChanged(object sender, EventArgs e) {
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237 | foreach (IOperator op in Problem.Operators) ParameterizeStochasticOperator(op);
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238 | ParameterizeIterationBasedOperators();
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239 | UpdateCrossovers();
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240 | UpdateMutators();
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241 | UpdateAnalyzers();
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242 | base.Problem_OperatorsChanged(sender, e);
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243 | }
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244 | private void Elites_ValueChanged(object sender, EventArgs e) {
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245 | ParameterizeSelectors();
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246 | }
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247 |
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248 | private void PopulationSizeParameter_ValueChanged(object sender, EventArgs e) {
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249 | PopulationSize.ValueChanged += new EventHandler(PopulationSize_ValueChanged);
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250 | ParameterizeSelectors();
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251 | }
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252 | private void PopulationSize_ValueChanged(object sender, EventArgs e) {
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253 | ParameterizeSelectors();
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254 | }
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255 | private void Evaluator_QualityParameter_ActualNameChanged(object sender, EventArgs e) {
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256 | ParameterizeGeneticAlgorithmMainLoop();
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257 | ParameterizeSelectors();
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258 | ParameterizeAnalyzers();
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259 | }
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260 | #endregion
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261 |
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262 | #region Helpers
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263 | private void Initialize() {
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264 | PopulationSizeParameter.ValueChanged += new EventHandler(PopulationSizeParameter_ValueChanged);
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265 | PopulationSize.ValueChanged += new EventHandler(PopulationSize_ValueChanged);
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266 | if (Problem != null) {
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267 | Problem.Evaluator.QualityParameter.ActualNameChanged += new EventHandler(Evaluator_QualityParameter_ActualNameChanged);
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268 | }
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269 | }
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270 |
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271 | private void ParameterizeSolutionsCreator() {
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272 | SolutionsCreator.EvaluatorParameter.ActualName = Problem.EvaluatorParameter.Name;
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273 | SolutionsCreator.SolutionCreatorParameter.ActualName = Problem.SolutionCreatorParameter.Name;
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274 | }
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275 | private void ParameterizeGeneticAlgorithmMainLoop() {
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276 | GeneticAlgorithmMainLoop.EvaluatorParameter.ActualName = Problem.EvaluatorParameter.Name;
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277 | GeneticAlgorithmMainLoop.MaximizationParameter.ActualName = Problem.MaximizationParameter.Name;
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278 | GeneticAlgorithmMainLoop.QualityParameter.ActualName = Problem.Evaluator.QualityParameter.ActualName;
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279 | }
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280 | private void ParameterizeStochasticOperator(IOperator op) {
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281 | IStochasticOperator stochasticOp = op as IStochasticOperator;
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282 | if (stochasticOp != null) {
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283 | stochasticOp.RandomParameter.ActualName = RandomCreator.RandomParameter.ActualName;
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284 | stochasticOp.RandomParameter.Hidden = true;
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285 | }
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286 | }
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287 | private void ParameterizeSelectors() {
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288 | foreach (ISelector selector in SelectorParameter.ValidValues) {
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289 | selector.CopySelected = new BoolValue(true);
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290 | selector.NumberOfSelectedSubScopesParameter.Value = new IntValue(1);
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291 | selector.NumberOfSelectedSubScopesParameter.Hidden = true;
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292 | ParameterizeStochasticOperator(selector);
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293 | }
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294 | if (Problem != null) {
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295 | foreach (ISingleObjectiveSelector selector in SelectorParameter.ValidValues.OfType<ISingleObjectiveSelector>()) {
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296 | selector.MaximizationParameter.ActualName = Problem.MaximizationParameter.Name;
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297 | selector.MaximizationParameter.Hidden = true;
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298 | selector.QualityParameter.ActualName = Problem.Evaluator.QualityParameter.ActualName;
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299 | selector.QualityParameter.Hidden = true;
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300 | }
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301 | }
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302 | }
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303 | private void ParameterizeAnalyzers() {
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304 | qualityAnalyzer.ResultsParameter.ActualName = "Results";
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305 | qualityAnalyzer.ResultsParameter.Hidden = true;
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306 | if (Problem != null) {
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307 | qualityAnalyzer.MaximizationParameter.ActualName = Problem.MaximizationParameter.Name;
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308 | qualityAnalyzer.MaximizationParameter.Hidden = true;
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309 | qualityAnalyzer.QualityParameter.ActualName = Problem.Evaluator.QualityParameter.ActualName;
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310 | qualityAnalyzer.QualityParameter.Depth = 1;
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311 | qualityAnalyzer.QualityParameter.Hidden = true;
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312 | qualityAnalyzer.BestKnownQualityParameter.ActualName = Problem.BestKnownQualityParameter.Name;
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313 | qualityAnalyzer.BestKnownQualityParameter.Hidden = true;
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314 | }
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315 | }
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316 | private void ParameterizeIterationBasedOperators() {
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317 | if (Problem != null) {
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318 | foreach (IIterationBasedOperator op in Problem.Operators.OfType<IIterationBasedOperator>()) {
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319 | op.IterationsParameter.ActualName = "Generations";
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320 | op.IterationsParameter.Hidden = true;
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321 | op.MaximumIterationsParameter.ActualName = "MaximumGenerations";
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322 | op.MaximumIterationsParameter.Hidden = true;
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323 | }
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324 | }
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325 | }
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326 | private void UpdateCrossovers() {
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327 | ICrossover oldCrossover = CrossoverParameter.Value;
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328 | CrossoverParameter.ValidValues.Clear();
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329 | foreach (ICrossover crossover in Problem.Operators.OfType<ICrossover>().OrderBy(x => x.Name))
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330 | CrossoverParameter.ValidValues.Add(crossover);
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331 | if (oldCrossover != null) {
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332 | ICrossover crossover = CrossoverParameter.ValidValues.FirstOrDefault(x => x.GetType() == oldCrossover.GetType());
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333 | if (crossover != null) CrossoverParameter.Value = crossover;
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334 | }
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335 | }
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336 | private void UpdateMutators() {
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337 | IManipulator oldMutator = MutatorParameter.Value;
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338 | MutatorParameter.ValidValues.Clear();
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339 | foreach (IManipulator mutator in Problem.Operators.OfType<IManipulator>().OrderBy(x => x.Name))
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340 | MutatorParameter.ValidValues.Add(mutator);
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341 | if (oldMutator != null) {
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342 | IManipulator mutator = MutatorParameter.ValidValues.FirstOrDefault(x => x.GetType() == oldMutator.GetType());
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343 | if (mutator != null) MutatorParameter.Value = mutator;
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344 | }
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345 | }
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346 | private void UpdateAnalyzers() {
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347 | Analyzer.Operators.Clear();
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348 | if (Problem != null) {
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349 | foreach (IAnalyzer analyzer in Problem.Operators.OfType<IAnalyzer>()) {
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350 | foreach (IScopeTreeLookupParameter param in analyzer.Parameters.OfType<IScopeTreeLookupParameter>())
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351 | param.Depth = 1;
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352 | Analyzer.Operators.Add(analyzer, analyzer.EnabledByDefault);
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353 | }
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354 | }
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355 | Analyzer.Operators.Add(qualityAnalyzer, qualityAnalyzer.EnabledByDefault);
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356 | }
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357 | private CellularGeneticAlgorithmMainLoop FindMainLoop(IOperator start) {
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358 | IOperator mainLoop = start;
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359 | while (mainLoop != null && !(mainLoop is CellularGeneticAlgorithmMainLoop))
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360 | mainLoop = ((SingleSuccessorOperator)mainLoop).Successor;
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361 | if (mainLoop == null) return null;
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362 | else return (CellularGeneticAlgorithmMainLoop)mainLoop;
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363 | }
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364 | #endregion
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365 | }
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366 | }
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