1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2008 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System;
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23 | using System.Collections.Generic;
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24 | using System.Linq;
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25 | using System.Text;
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26 | using HeuristicLab.Core;
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27 | using HeuristicLab.Data;
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28 | using HeuristicLab.Operators;
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29 | using HeuristicLab.DataAnalysis;
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30 |
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31 | namespace HeuristicLab.GP.StructureIdentification {
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32 | public abstract class GPEvaluatorBase : OperatorBase {
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33 | public GPEvaluatorBase()
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34 | : base() {
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35 | AddVariableInfo(new VariableInfo("FunctionTree", "The function tree that should be evaluated", typeof(IFunctionTree), VariableKind.In));
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36 | AddVariableInfo(new VariableInfo("TreeSize", "Size (number of nodes) of the tree to evaluate", typeof(IntData), VariableKind.In));
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37 | AddVariableInfo(new VariableInfo("Dataset", "Dataset with all samples on which to apply the function", typeof(Dataset), VariableKind.In));
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38 | AddVariableInfo(new VariableInfo("TargetVariable", "Index of the column of the dataset that holds the target variable", typeof(IntData), VariableKind.In));
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39 | AddVariableInfo(new VariableInfo("PunishmentFactor", "Punishment factor for invalid estimations", typeof(DoubleData), VariableKind.In));
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40 | AddVariableInfo(new VariableInfo("TotalEvaluatedNodes", "Number of evaluated nodes", typeof(DoubleData), VariableKind.In | VariableKind.Out));
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41 | AddVariableInfo(new VariableInfo("SamplesStart", "Start index of samples in dataset to evaluate", typeof(IntData), VariableKind.In));
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42 | AddVariableInfo(new VariableInfo("SamplesEnd", "End index of samples in dataset to evaluate", typeof(IntData), VariableKind.In));
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43 | AddVariableInfo(new VariableInfo("UseEstimatedTargetValue", "Wether to use the original (measured) or the estimated (calculated) value for the targat variable when doing autoregressive modelling", typeof(BoolData), VariableKind.In));
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44 | }
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45 |
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46 | public override IOperation Apply(IScope scope) {
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47 | // get all variable values
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48 | int targetVariable = GetVariableValue<IntData>("TargetVariable", scope, true).Data;
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49 | Dataset dataset = GetVariableValue<Dataset>("Dataset", scope, true);
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50 | BakedFunctionTree functionTree = GetVariableValue<BakedFunctionTree>("FunctionTree", scope, true);
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51 | double punishmentFactor = GetVariableValue<DoubleData>("PunishmentFactor", scope, true).Data;
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52 | int treeSize = scope.GetVariableValue<IntData>("TreeSize", false).Data;
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53 | double totalEvaluatedNodes = scope.GetVariableValue<DoubleData>("TotalEvaluatedNodes", true).Data;
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54 | int start = GetVariableValue<IntData>("SamplesStart", scope, true).Data;
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55 | int end = GetVariableValue<IntData>("SamplesEnd", scope, true).Data;
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56 | bool useEstimatedValues = GetVariableValue<BoolData>("UseEstimatedTargetValue", scope, true).Data;
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57 | double[] backupValues = null;
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58 | // prepare for autoregressive modelling by saving the original values of the target-variable to a backup array
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59 | if (useEstimatedValues &&
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60 | (backupValues == null || backupValues.Length != end - start)) {
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61 | backupValues = new double[end - start];
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62 | for (int i = start; i < end; i++) {
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63 | backupValues[i - start] = dataset.GetValue(i, targetVariable);
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64 | }
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65 | }
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66 |
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67 | // initialize and reset the evaluator
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68 | BakedTreeEvaluator evaluator = new BakedTreeEvaluator();
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69 | evaluator.ResetEvaluator(functionTree, dataset, targetVariable, start, end, punishmentFactor);
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70 |
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71 | Evaluate(scope, evaluator, dataset, targetVariable, start, end, useEstimatedValues);
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72 |
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73 | // restore the values of the target variable from the backup array if necessary
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74 | if (useEstimatedValues) {
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75 | for (int i = start; i < end; i++) {
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76 | dataset.SetValue(i, targetVariable, backupValues[i - start]);
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77 | }
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78 | }
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79 |
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80 | // update the value of total evaluated nodes
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81 | scope.GetVariableValue<DoubleData>("TotalEvaluatedNodes", true).Data = totalEvaluatedNodes + treeSize * (end - start);
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82 | return null;
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83 | }
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84 |
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85 | public abstract void Evaluate(IScope scope, BakedTreeEvaluator evaluator, Dataset dataset, int targetVariable, int start, int end, bool updateTargetValues);
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86 | }
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87 | }
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