1 | using System;
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2 | using System.Collections.Generic;
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3 | using System.Linq;
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4 | using System.Text;
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5 | using System.Threading.Tasks;
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6 | using HeuristicLab.Core;
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7 | using HeuristicLab.Optimization;
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8 | using HEAL.Attic;
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9 | using HeuristicLab.Common;
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10 | using HeuristicLab.Problems.Instances;
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11 | using HeuristicLab.Parameters;
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12 | using HeuristicLab.Data;
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13 | using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
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14 |
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15 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic.Regression {
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16 | [StorableType("7464E84B-65CC-440A-91F0-9FA920D730F9")]
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17 | [Item(Name = "Structured Symbolic Regression Single Objective Problem (single-objective)", Description = "A problem with a structural definition and unfixed subfunctions.")]
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18 | [Creatable(CreatableAttribute.Categories.GeneticProgrammingProblems, Priority = 150)]
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19 | public class StructuredSymbolicRegressionSingleObjectiveProblem : SingleObjectiveBasicProblem<MultiEncoding>, IRegressionProblem, IProblemInstanceConsumer<RegressionProblemData> {
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20 |
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21 | #region Constants
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22 | private const string ProblemDataParameterName = "ProblemData";
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23 | private const string StructureDefinitionParameterName = "Structure Definition";
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24 | private const string GrammarParameterName = "Grammar";
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25 | private const string StructureTemplateParameterName = "Structure Template";
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26 | #endregion
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27 |
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28 | #region Parameter
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29 | public IValueParameter<IRegressionProblemData> ProblemDataParameter => (IValueParameter<IRegressionProblemData>)Parameters[ProblemDataParameterName];
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30 | public IFixedValueParameter<StringValue> StructureDefinitionParameter => (IFixedValueParameter<StringValue>)Parameters[StructureDefinitionParameterName];
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31 | public IFixedValueParameter<StructureTemplate> StructureTemplateParameter => (IFixedValueParameter<StructureTemplate>)Parameters[StructureTemplateParameterName];
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32 | public IValueParameter<ISymbolicDataAnalysisGrammar> GrammarParameter => (IValueParameter<ISymbolicDataAnalysisGrammar>)Parameters[GrammarParameterName];
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33 | #endregion
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34 |
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35 | #region Properties
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36 | public IRegressionProblemData ProblemData {
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37 | get => ProblemDataParameter.Value;
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38 | set {
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39 | ProblemDataParameter.Value = value;
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40 | ProblemDataChanged?.Invoke(this, EventArgs.Empty);
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41 | }
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42 | }
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43 |
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44 | public string StructureDefinition {
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45 | get => StructureDefinitionParameter.Value.Value;
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46 | set => StructureDefinitionParameter.Value.Value = value;
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47 | }
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48 |
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49 | public StructureTemplate StructureTemplate {
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50 | get => StructureTemplateParameter.Value;
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51 | }
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52 |
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53 | public ISymbolicDataAnalysisGrammar Grammar {
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54 | get => GrammarParameter.Value;
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55 | set => GrammarParameter.Value = value;
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56 | }
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57 |
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58 | IParameter IDataAnalysisProblem.ProblemDataParameter => ProblemDataParameter;
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59 | IDataAnalysisProblemData IDataAnalysisProblem.ProblemData => ProblemData;
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60 |
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61 | public override bool Maximization => true;
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62 | #endregion
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63 |
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64 | #region EventHandlers
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65 | public event EventHandler ProblemDataChanged;
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66 | #endregion
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67 |
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68 | #region Constructors & Cloning
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69 | public StructuredSymbolicRegressionSingleObjectiveProblem() {
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70 | var problemData = new ShapeConstrainedRegressionProblemData();
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71 | var grammar = new LinearScalingGrammar();
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72 | var varSym = (Variable)grammar.GetSymbol("Variable");
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73 | varSym.AllVariableNames = problemData.InputVariables.Select(x => x.Value);
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74 | varSym.VariableNames = problemData.InputVariables.Select(x => x.Value);
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75 | varSym.Enabled = true;
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76 |
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77 | var structureTemplate = new StructureTemplate();
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78 | structureTemplate.Changed += OnTemplateChanged;
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79 |
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80 | Parameters.Add(new ValueParameter<IRegressionProblemData>(ProblemDataParameterName, problemData));
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81 | Parameters.Add(new FixedValueParameter<StructureTemplate>(StructureTemplateParameterName, structureTemplate));
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82 | Parameters.Add(new ValueParameter<ISymbolicDataAnalysisGrammar>(GrammarParameterName, grammar));
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83 |
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84 | structureTemplate.Template = "f(x)*f(y)+5";
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85 | }
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86 |
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87 | public StructuredSymbolicRegressionSingleObjectiveProblem(StructuredSymbolicRegressionSingleObjectiveProblem original, Cloner cloner) { }
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88 |
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89 | [StorableConstructor]
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90 | protected StructuredSymbolicRegressionSingleObjectiveProblem(StorableConstructorFlag _) : base(_) { }
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91 | #endregion
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92 |
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93 | #region Cloning
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94 | public override IDeepCloneable Clone(Cloner cloner) =>
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95 | new StructuredSymbolicRegressionSingleObjectiveProblem(this, cloner);
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96 | #endregion
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97 |
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98 | private void OnTemplateChanged(object sender, EventArgs args) {
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99 | foreach (var e in Encoding.Encodings.ToArray())
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100 | Encoding.Remove(e);
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101 |
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102 | foreach (var sf in StructureTemplate.SubFunctions.Values) {
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103 | Encoding.Add(new SymbolicExpressionTreeEncoding(sf.Name, sf.Grammar, sf.MaximumSymbolicExpressionTreeLength, sf.MaximumSymbolicExpressionTreeDepth));
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104 | }
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105 | }
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106 |
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107 | public override void Analyze(Individual[] individuals, double[] qualities, ResultCollection results, IRandom random) {
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108 | base.Analyze(individuals, qualities, results, random);
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109 |
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110 | int bestIdx = 0;
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111 | double bestQuality = Maximization ? double.MinValue : double.MaxValue;
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112 | for(int idx = 0; idx < qualities.Length; ++idx) {
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113 | if((Maximization && qualities[idx] > bestQuality) ||
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114 | (!Maximization && qualities[idx] < bestQuality)) {
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115 | bestQuality = qualities[idx];
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116 | bestIdx = idx;
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117 | }
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118 | }
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119 |
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120 | if (results.TryGetValue("Best Tree", out IResult result))
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121 | result.Value = BuildTree(individuals[bestIdx]);
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122 | else
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123 | results.Add(new Result("Best Tree", BuildTree(individuals[bestIdx])));
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124 |
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125 | /*
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126 | if (results.TryGetValue("Tree", out IResult result)) {
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127 | var list = result.Value as ItemList<ISymbolicExpressionTree>;
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128 | list.Clear();
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129 | list.AddRange(individuals.Select(x => (BuildTree(x))));
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130 | } else
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131 | results.Add(new Result("Tree", new ItemList<ISymbolicExpressionTree>(individuals.Select(x => (BuildTree(x))))));
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132 | */
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133 | }
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134 |
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135 | public override double Evaluate(Individual individual, IRandom random) {
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136 | var tree = BuildTree(individual);
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137 | var interpreter = new SymbolicDataAnalysisExpressionTreeInterpreter();
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138 | var estimationInterval = ProblemData.VariableRanges.GetInterval(ProblemData.TargetVariable);
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139 | var quality = SymbolicRegressionSingleObjectivePearsonRSquaredEvaluator.Calculate(
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140 | interpreter, tree,
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141 | estimationInterval.LowerBound, estimationInterval.UpperBound,
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142 | ProblemData, ProblemData.TrainingIndices, false);
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143 |
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144 | return quality;
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145 | }
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146 |
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147 | private ISymbolicExpressionTree BuildTree(Individual individual) {
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148 | var templateTree = (ISymbolicExpressionTree)StructureTemplate.Tree.Clone();
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149 |
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150 | // build main tree
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151 | foreach (var n in templateTree.IterateNodesPrefix()) {
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152 | if (n.Symbol is SubFunctionSymbol) {
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153 | var subFunctionTreeNode = n as SubFunctionTreeNode;
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154 | var subFunctionTree = individual.SymbolicExpressionTree(subFunctionTreeNode.SubFunction.Name);
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155 | var parent = n.Parent;
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156 |
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157 | // remove SubFunctionTreeNode
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158 | parent.RemoveSubtree(parent.IndexOfSubtree(subFunctionTreeNode));
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159 |
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160 | // add new tree
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161 | var subTree = subFunctionTree.Root.GetSubtree(0) // Start
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162 | .GetSubtree(0); // Offset
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163 | parent.AddSubtree(subTree);
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164 | }
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165 | }
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166 | return templateTree;
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167 | }
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168 |
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169 | public void Load(RegressionProblemData data) {
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170 | ProblemData = data;
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171 | }
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172 | }
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173 | }
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