1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System.Collections.Generic;
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23 | using System.Linq;
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24 | using HeuristicLab.Analysis;
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25 | using HeuristicLab.Common;
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26 | using HeuristicLab.Core;
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27 | using HeuristicLab.Data;
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28 | using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
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29 | using HeuristicLab.Optimization;
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30 | using HeuristicLab.Parameters;
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31 | using HEAL.Attic;
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32 |
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33 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic.Regression {
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34 | /// <summary>
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35 | /// An operator that analyzes the training best symbolic regression solution for multi objective symbolic regression problems.
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36 | /// </summary>
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37 | [Item("SymbolicRegressionMultiObjectiveTrainingBestSolutionAnalyzer", "An operator that analyzes the training best symbolic regression solution for multi objective symbolic regression problems.")]
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38 | [StorableType("431B0046-3115-493F-BD15-E3DA98E3E9C7")]
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39 | public sealed class SymbolicRegressionMultiObjectiveTrainingBestSolutionAnalyzer : SymbolicDataAnalysisMultiObjectiveTrainingBestSolutionAnalyzer<ISymbolicRegressionSolution>,
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40 | ISymbolicDataAnalysisInterpreterOperator, ISymbolicDataAnalysisBoundedOperator {
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41 | private const string ProblemDataParameterName = "ProblemData";
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42 | private const string SymbolicDataAnalysisTreeInterpreterParameterName = "SymbolicDataAnalysisTreeInterpreter";
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43 | private const string EstimationLimitsParameterName = "EstimationLimits";
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44 | private const string MaximumSymbolicExpressionTreeLengthParameterName = "MaximumSymbolicExpressionTreeLength";
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45 | private const string ValidationPartitionParameterName = "ValidationPartition";
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46 | private const string AnalyzeTestErrorParameterName = "Analyze Test Error";
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47 |
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48 | #region parameter properties
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49 | public ILookupParameter<IRegressionProblemData> ProblemDataParameter {
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50 | get { return (ILookupParameter<IRegressionProblemData>)Parameters[ProblemDataParameterName]; }
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51 | }
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52 | public ILookupParameter<ISymbolicDataAnalysisExpressionTreeInterpreter> SymbolicDataAnalysisTreeInterpreterParameter {
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53 | get { return (ILookupParameter<ISymbolicDataAnalysisExpressionTreeInterpreter>)Parameters[SymbolicDataAnalysisTreeInterpreterParameterName]; }
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54 | }
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55 | public IValueLookupParameter<DoubleLimit> EstimationLimitsParameter {
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56 | get { return (IValueLookupParameter<DoubleLimit>)Parameters[EstimationLimitsParameterName]; }
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57 | }
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58 | public ILookupParameter<IntValue> MaximumSymbolicExpressionTreeLengthParameter {
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59 | get { return (ILookupParameter<IntValue>)Parameters[MaximumSymbolicExpressionTreeLengthParameterName]; }
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60 | }
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61 |
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62 | public IValueLookupParameter<IntRange> ValidationPartitionParameter {
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63 | get { return (IValueLookupParameter<IntRange>)Parameters[ValidationPartitionParameterName]; }
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64 | }
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65 |
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66 | public IFixedValueParameter<BoolValue> AnalyzeTestErrorParameter {
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67 | get { return (IFixedValueParameter<BoolValue>)Parameters[AnalyzeTestErrorParameterName]; }
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68 | }
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69 | #endregion
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70 |
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71 | public bool AnalyzeTestError {
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72 | get { return AnalyzeTestErrorParameter.Value.Value; }
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73 | set { AnalyzeTestErrorParameter.Value.Value = value; }
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74 | }
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75 |
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76 | [StorableConstructor]
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77 | private SymbolicRegressionMultiObjectiveTrainingBestSolutionAnalyzer(StorableConstructorFlag _) : base(_) { }
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78 | private SymbolicRegressionMultiObjectiveTrainingBestSolutionAnalyzer(SymbolicRegressionMultiObjectiveTrainingBestSolutionAnalyzer original, Cloner cloner) : base(original, cloner) { }
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79 | public SymbolicRegressionMultiObjectiveTrainingBestSolutionAnalyzer()
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80 | : base() {
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81 | Parameters.Add(new LookupParameter<IRegressionProblemData>(ProblemDataParameterName, "The problem data for the symbolic regression solution.") { Hidden = true });
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82 | Parameters.Add(new LookupParameter<ISymbolicDataAnalysisExpressionTreeInterpreter>(SymbolicDataAnalysisTreeInterpreterParameterName, "The symbolic data analysis tree interpreter for the symbolic expression tree.") { Hidden = true });
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83 | Parameters.Add(new ValueLookupParameter<DoubleLimit>(EstimationLimitsParameterName, "The lower and upper limit for the estimated values produced by the symbolic regression model.") { Hidden = true });
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84 | Parameters.Add(new LookupParameter<IntValue>(MaximumSymbolicExpressionTreeLengthParameterName, "Maximal length of the symbolic expression.") { Hidden = true });
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85 | Parameters.Add(new ValueLookupParameter<IntRange>(ValidationPartitionParameterName, "The validation partition."));
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86 | Parameters.Add(new FixedValueParameter<BoolValue>(AnalyzeTestErrorParameterName, "Flag whether the test error should be displayed in the Pareto-Front", new BoolValue(false)));
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87 | }
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88 |
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89 | [StorableHook(HookType.AfterDeserialization)]
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90 | private void AfterDeserialization() {
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91 | if (!Parameters.ContainsKey(MaximumSymbolicExpressionTreeLengthParameterName))
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92 | Parameters.Add(new LookupParameter<IntValue>(MaximumSymbolicExpressionTreeLengthParameterName, "Maximal length of the symbolic expression.") { Hidden = true });
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93 | if (!Parameters.ContainsKey(ValidationPartitionParameterName))
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94 | Parameters.Add(new ValueLookupParameter<IntRange>(ValidationPartitionParameterName, "The validation partition."));
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95 | if (!Parameters.ContainsKey(AnalyzeTestErrorParameterName))
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96 | Parameters.Add(new FixedValueParameter<BoolValue>(AnalyzeTestErrorParameterName, "Flag whether the test error should be displayed in the Pareto-Front", new BoolValue(false)));
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97 | }
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98 |
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99 | public override IDeepCloneable Clone(Cloner cloner) {
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100 | return new SymbolicRegressionMultiObjectiveTrainingBestSolutionAnalyzer(this, cloner);
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101 | }
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102 |
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103 | protected override ISymbolicRegressionSolution CreateSolution(ISymbolicExpressionTree bestTree, double[] bestQuality) {
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104 | var model = new SymbolicRegressionModel(ProblemDataParameter.ActualValue.TargetVariable, (ISymbolicExpressionTree)bestTree.Clone(), SymbolicDataAnalysisTreeInterpreterParameter.ActualValue, EstimationLimitsParameter.ActualValue.Lower, EstimationLimitsParameter.ActualValue.Upper);
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105 | if (ApplyLinearScalingParameter.ActualValue.Value) model.Scale(ProblemDataParameter.ActualValue);
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106 | return new SymbolicRegressionSolution(model, (IRegressionProblemData)ProblemDataParameter.ActualValue.Clone());
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107 | }
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108 |
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109 | public override IOperation Apply() {
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110 | var operation = base.Apply();
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111 | var paretoFront = TrainingBestSolutionsParameter.ActualValue;
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112 |
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113 | IResult result;
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114 | ScatterPlot qualityToTreeSize;
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115 | if (!ResultCollection.TryGetValue("Pareto Front Analysis", out result)) {
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116 | qualityToTreeSize = new ScatterPlot("Quality vs Tree Size", "");
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117 | qualityToTreeSize.VisualProperties.XAxisMinimumAuto = false;
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118 | qualityToTreeSize.VisualProperties.XAxisMaximumAuto = false;
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119 | qualityToTreeSize.VisualProperties.YAxisMinimumAuto = false;
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120 | qualityToTreeSize.VisualProperties.YAxisMaximumAuto = false;
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121 |
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122 | qualityToTreeSize.VisualProperties.XAxisMinimumFixedValue = 0;
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123 | qualityToTreeSize.VisualProperties.XAxisMaximumFixedValue = MaximumSymbolicExpressionTreeLengthParameter.ActualValue.Value;
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124 | qualityToTreeSize.VisualProperties.YAxisMinimumFixedValue = 0;
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125 | qualityToTreeSize.VisualProperties.YAxisMaximumFixedValue = 2;
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126 | ResultCollection.Add(new Result("Pareto Front Analysis", qualityToTreeSize));
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127 | } else {
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128 | qualityToTreeSize = (ScatterPlot)result.Value;
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129 | }
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130 |
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131 |
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132 | int previousTreeLength = -1;
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133 | var sizeParetoFront = new LinkedList<ISymbolicRegressionSolution>();
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134 | foreach (var solution in paretoFront.OrderBy(s => s.Model.SymbolicExpressionTree.Length)) {
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135 | int treeLength = solution.Model.SymbolicExpressionTree.Length;
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136 | if (!sizeParetoFront.Any()) sizeParetoFront.AddLast(solution);
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137 | if (solution.TrainingNormalizedMeanSquaredError < sizeParetoFront.Last.Value.TrainingNormalizedMeanSquaredError) {
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138 | if (treeLength == previousTreeLength)
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139 | sizeParetoFront.RemoveLast();
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140 | sizeParetoFront.AddLast(solution);
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141 | }
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142 | previousTreeLength = treeLength;
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143 | }
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144 |
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145 | qualityToTreeSize.Rows.Clear();
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146 | var trainingRow = new ScatterPlotDataRow("Training NMSE", "", sizeParetoFront.Select(x => new Point2D<double>(x.Model.SymbolicExpressionTree.Length, x.TrainingNormalizedMeanSquaredError, x)));
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147 | trainingRow.VisualProperties.PointSize = 8;
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148 | qualityToTreeSize.Rows.Add(trainingRow);
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149 |
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150 | if (AnalyzeTestError) {
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151 | var testRow = new ScatterPlotDataRow("Test NMSE", "",
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152 | sizeParetoFront.Select(x => new Point2D<double>(x.Model.SymbolicExpressionTree.Length, x.TestNormalizedMeanSquaredError, x)));
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153 | testRow.VisualProperties.PointSize = 8;
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154 | qualityToTreeSize.Rows.Add(testRow);
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155 | }
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156 |
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157 | var validationPartition = ValidationPartitionParameter.ActualValue;
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158 | if (validationPartition.Size != 0) {
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159 | var problemData = ProblemDataParameter.ActualValue;
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160 | var validationIndizes = Enumerable.Range(validationPartition.Start, validationPartition.Size).ToList();
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161 | var targetValues = problemData.Dataset.GetDoubleValues(problemData.TargetVariable, validationIndizes).ToList();
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162 | OnlineCalculatorError error;
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163 | var validationRow = new ScatterPlotDataRow("Validation NMSE", "",
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164 | sizeParetoFront.Select(x => new Point2D<double>(x.Model.SymbolicExpressionTree.Length,
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165 | OnlineNormalizedMeanSquaredErrorCalculator.Calculate(targetValues, x.GetEstimatedValues(validationIndizes), out error))));
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166 | validationRow.VisualProperties.PointSize = 7;
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167 | qualityToTreeSize.Rows.Add(validationRow);
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168 | }
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169 |
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170 | return operation;
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171 | }
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172 |
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173 | }
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174 | }
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