[17479] | 1 | using HEAL.Attic;
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| 2 | using HeuristicLab.Algorithms.OESRALPS.Analyzers.Regression;
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| 3 | using HeuristicLab.Algorithms.OESRALPS.Evaluators;
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| 4 | using HeuristicLab.Common;
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| 5 | using HeuristicLab.Core;
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| 6 | using HeuristicLab.Optimization;
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| 7 | using HeuristicLab.Parameters;
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| 8 | using HeuristicLab.Problems.DataAnalysis;
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| 9 | using HeuristicLab.Problems.DataAnalysis.Symbolic;
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| 10 | using HeuristicLab.Problems.DataAnalysis.Symbolic.Regression;
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| 11 | using System;
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| 12 | using System.Collections.Generic;
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| 13 | using System.Linq;
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| 14 | using System.Text;
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| 15 | using System.Threading.Tasks;
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| 16 |
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| 17 | namespace HeuristicLab.Algorithms.OESRALPS.Problems
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| 18 | {
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| 19 | [Item("Symbolic Regression Sliding Window Problem (single-objective)", "Represents a single objective symbolic regression problem.")]
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| 20 | [StorableType("7DDCF683-96FC-4F70-BF4F-FE3A0B0DE110")]
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| 21 | [Creatable(CreatableAttribute.Categories.GeneticProgrammingProblems, Priority = 101)]
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| 22 | class SymbolicRegressionSingleObjectiveSlidingWindowProblem : SymbolicDataAnalysisSingleObjectiveProblem<IRegressionProblemData, ISymbolicRegressionSingleObjectiveEvaluator, ISymbolicDataAnalysisSolutionCreator>, IRegressionProblem
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| 23 | {
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| 24 | private const double PunishmentFactor = 10;
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| 25 | private const int InitialMaximumTreeDepth = 12;
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| 26 | private const int InitialMaximumTreeLength = 50;
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| 27 | private const string EstimationLimitsParameterName = "EstimationLimits";
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| 28 | private const string EstimationLimitsParameterDescription = "The limits for the estimated value that can be returned by the symbolic regression model.";
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| 29 |
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| 30 | #region parameter properties
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| 31 | public IFixedValueParameter<DoubleLimit> EstimationLimitsParameter {
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| 32 | get { return (IFixedValueParameter<DoubleLimit>)Parameters[EstimationLimitsParameterName]; }
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| 33 | }
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| 34 | #endregion
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| 35 | #region properties
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| 36 | public DoubleLimit EstimationLimits {
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| 37 | get { return EstimationLimitsParameter.Value; }
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| 38 | }
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| 39 | #endregion
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| 40 | [StorableConstructor]
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| 41 | protected SymbolicRegressionSingleObjectiveSlidingWindowProblem(StorableConstructorFlag _) : base(_) { }
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| 42 | protected SymbolicRegressionSingleObjectiveSlidingWindowProblem(SymbolicRegressionSingleObjectiveSlidingWindowProblem original, Cloner cloner)
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| 43 | : base(original, cloner)
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| 44 | {
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| 45 | RegisterEventHandlers();
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| 46 | }
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| 47 | public override IDeepCloneable Clone(Cloner cloner) { return new SymbolicRegressionSingleObjectiveSlidingWindowProblem(this, cloner); }
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| 48 |
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| 49 | public SymbolicRegressionSingleObjectiveSlidingWindowProblem()
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| 50 | : base(new RegressionProblemData(), new SymbolicRegressionSingleObjectivePearsonRSquaredSlidingWindowEvaluator(), new SymbolicDataAnalysisExpressionTreeCreator())
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| 51 | {
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| 52 | Parameters.Add(new FixedValueParameter<DoubleLimit>(EstimationLimitsParameterName, EstimationLimitsParameterDescription));
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| 53 |
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| 54 | EstimationLimitsParameter.Hidden = true;
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| 55 |
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| 56 |
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| 57 | ApplyLinearScalingParameter.Value.Value = true;
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| 58 | Maximization.Value = true;
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| 59 | MaximumSymbolicExpressionTreeDepth.Value = InitialMaximumTreeDepth;
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| 60 | MaximumSymbolicExpressionTreeLength.Value = InitialMaximumTreeLength;
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| 61 |
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| 62 | RegisterEventHandlers();
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| 63 | ConfigureGrammarSymbols();
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| 64 | InitializeOperators();
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| 65 | UpdateEstimationLimits();
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| 66 | }
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| 67 |
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| 68 | [StorableHook(HookType.AfterDeserialization)]
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| 69 | private void AfterDeserialization()
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| 70 | {
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| 71 | RegisterEventHandlers();
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| 72 | // compatibility
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| 73 | bool changed = false;
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| 74 | if (!Operators.OfType<SymbolicRegressionSingleObjectiveTrainingParetoBestSolutionAnalyzer>().Any())
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| 75 | {
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| 76 | Operators.Add(new SymbolicRegressionSingleObjectiveTrainingParetoBestSolutionAnalyzer());
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| 77 | changed = true;
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| 78 | }
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| 79 | if (!Operators.OfType<SymbolicRegressionSingleObjectiveValidationParetoBestSolutionAnalyzer>().Any())
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| 80 | {
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| 81 | Operators.Add(new SymbolicRegressionSingleObjectiveValidationParetoBestSolutionAnalyzer());
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| 82 | changed = true;
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| 83 | }
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| 84 | if (!Operators.OfType<SymbolicRegressionSolutionsAnalyzer>().Any())
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| 85 | {
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| 86 | Operators.Add(new SymbolicRegressionSolutionsAnalyzer());
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| 87 | changed = true;
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| 88 | }
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| 89 | if (changed)
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| 90 | {
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| 91 | ParameterizeOperators();
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| 92 | }
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| 93 | }
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| 94 |
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| 95 | private void RegisterEventHandlers()
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| 96 | {
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| 97 | SymbolicExpressionTreeGrammarParameter.ValueChanged += (o, e) => ConfigureGrammarSymbols();
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| 98 | }
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| 99 |
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| 100 | private void ConfigureGrammarSymbols()
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| 101 | {
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| 102 | var grammar = SymbolicExpressionTreeGrammar as TypeCoherentExpressionGrammar;
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| 103 | if (grammar != null) grammar.ConfigureAsDefaultRegressionGrammar();
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| 104 | }
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| 105 |
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| 106 | private void InitializeOperators()
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| 107 | {
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| 108 | Operators.Add(new SymbolicRegressionSingleObjectiveValidationLayerBestSolutionSlidingWindowAnalyzer());
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| 109 | Operators.Add(new SymbolicRegressionSingleObjectiveTrainingBestSolutionAnalyzer());
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| 110 | Operators.Add(new SymbolicRegressionSingleObjectiveValidationBestSolutionAnalyzer());
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| 111 | Operators.Add(new SymbolicRegressionSingleObjectiveOverfittingAnalyzer());
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| 112 | Operators.Add(new SymbolicRegressionSingleObjectiveTrainingParetoBestSolutionAnalyzer());
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| 113 | Operators.Add(new SymbolicRegressionSingleObjectiveValidationParetoBestSolutionAnalyzer());
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| 114 | Operators.Add(new SymbolicRegressionSolutionsAnalyzer());
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| 115 | Operators.Add(new SymbolicExpressionTreePhenotypicSimilarityCalculator());
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| 116 | Operators.Add(new SymbolicRegressionPhenotypicDiversityAnalyzer(Operators.OfType<SymbolicExpressionTreePhenotypicSimilarityCalculator>()) { DiversityResultName = "Phenotypic Diversity" });
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| 117 | ParameterizeOperators();
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| 118 | }
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| 119 |
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| 120 | private void UpdateEstimationLimits()
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| 121 | {
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| 122 | if (ProblemData.TrainingIndices.Any())
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| 123 | {
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| 124 | var targetValues = ProblemData.Dataset.GetDoubleValues(ProblemData.TargetVariable, ProblemData.TrainingIndices).ToList();
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| 125 | var mean = targetValues.Average();
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| 126 | var range = targetValues.Max() - targetValues.Min();
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| 127 | EstimationLimits.Upper = mean + PunishmentFactor * range;
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| 128 | EstimationLimits.Lower = mean - PunishmentFactor * range;
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| 129 | }
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| 130 | else
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| 131 | {
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| 132 | EstimationLimits.Upper = double.MaxValue;
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| 133 | EstimationLimits.Lower = double.MinValue;
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| 134 | }
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| 135 | }
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| 136 |
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| 137 | protected override void OnProblemDataChanged()
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| 138 | {
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| 139 | base.OnProblemDataChanged();
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| 140 | UpdateEstimationLimits();
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| 141 | }
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| 142 |
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| 143 | protected override void ParameterizeOperators()
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| 144 | {
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| 145 | base.ParameterizeOperators();
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| 146 | if (Parameters.ContainsKey(EstimationLimitsParameterName))
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| 147 | {
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| 148 | var operators = Parameters.OfType<IValueParameter>().Select(p => p.Value).OfType<IOperator>().Union(Operators);
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| 149 | foreach (var op in operators.OfType<ISymbolicDataAnalysisBoundedOperator>())
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| 150 | {
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| 151 | op.EstimationLimitsParameter.ActualName = EstimationLimitsParameter.Name;
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| 152 | }
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| 153 | }
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| 154 |
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| 155 | foreach (var op in Operators.OfType<ISolutionSimilarityCalculator>())
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| 156 | {
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| 157 | op.SolutionVariableName = SolutionCreator.SymbolicExpressionTreeParameter.ActualName;
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| 158 | op.QualityVariableName = Evaluator.QualityParameter.ActualName;
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| 159 |
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| 160 | if (op is SymbolicExpressionTreePhenotypicSimilarityCalculator)
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| 161 | {
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| 162 | var phenotypicSimilarityCalculator = (SymbolicExpressionTreePhenotypicSimilarityCalculator)op;
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| 163 | phenotypicSimilarityCalculator.ProblemData = ProblemData;
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| 164 | phenotypicSimilarityCalculator.Interpreter = SymbolicExpressionTreeInterpreter;
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| 165 | }
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| 166 | }
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| 167 | }
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| 168 | }
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| 169 | } |
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