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source: branches/3040_VectorBasedGP/HeuristicLab.Problems.Instances.DataAnalysis/3.3/Classification/ResourceClassificationInstanceProvider.cs @ 17511

Last change on this file since 17511 was 17414, checked in by pfleck, 5 years ago

#3040 Started adding UCI time series regression benchmarks.
Adapted parser (extracted format options & added parsing for double vectors).

File size: 2.7 KB
Line 
1#region License Information
2/* HeuristicLab
3 * Copyright (C) Heuristic and Evolutionary Algorithms Laboratory (HEAL)
4 *
5 * This file is part of HeuristicLab.
6 *
7 * HeuristicLab is free software: you can redistribute it and/or modify
8 * it under the terms of the GNU General Public License as published by
9 * the Free Software Foundation, either version 3 of the License, or
10 * (at your option) any later version.
11 *
12 * HeuristicLab is distributed in the hope that it will be useful,
13 * but WITHOUT ANY WARRANTY; without even the implied warranty of
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
15 * GNU General Public License for more details.
16 *
17 * You should have received a copy of the GNU General Public License
18 * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
19 */
20#endregion
21
22using System;
23using System.Globalization;
24using System.IO;
25using System.IO.Compression;
26using System.Linq;
27using System.Reflection;
28using System.Text.RegularExpressions;
29using HeuristicLab.Problems.DataAnalysis;
30
31namespace HeuristicLab.Problems.Instances.DataAnalysis {
32  public abstract class ResourceClassificationInstanceProvider : ClassificationInstanceProvider {
33
34    protected abstract string FileName { get; }
35
36    public override IClassificationProblemData LoadData(IDataDescriptor id) {
37      var descriptor = (ResourceClassificationDataDescriptor)id;
38
39      var instanceArchiveName = GetResourceName(FileName + @"\.zip");
40      using (var instancesZipFile = new ZipArchive(GetType().Assembly.GetManifestResourceStream(instanceArchiveName), ZipArchiveMode.Read)) {
41        var entry = instancesZipFile.GetEntry(descriptor.ResourceName);
42
43        var formatOptions = GetFormatOptions(entry);
44
45        TableFileParser csvFileParser = new TableFileParser();
46        using (Stream stream = entry.Open()) {
47          csvFileParser.Parse(stream, formatOptions, true);
48        }
49
50        Dataset dataset = new Dataset(csvFileParser.VariableNames, csvFileParser.Values);
51        if (!descriptor.CheckVariableNames(csvFileParser.VariableNames)) {
52          throw new ArgumentException("Parsed file contains variables which are not in the descriptor.");
53        }
54
55        return descriptor.GenerateClassificationData(dataset);
56      }
57    }
58
59    protected virtual string GetResourceName(string fileName) {
60      return Assembly.GetExecutingAssembly().GetManifestResourceNames()
61              .Where(x => Regex.Match(x, @".*\.Data\." + fileName).Success).SingleOrDefault();
62    }
63
64    protected virtual TableFileFormatOptions GetFormatOptions(ZipArchiveEntry entry) {
65      using (Stream stream = entry.Open()) {
66        return TableFileParser.DetermineFileFormat(stream);
67      }
68    }
69  }
70}
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