[17855] | 1 | #region License Information
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| 2 | /* HeuristicLab
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| 3 | * Copyright (C) Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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| 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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| 22 | using System;
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| 23 | using System.Collections.Generic;
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| 24 | using System.Globalization;
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| 25 | using System.Linq;
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| 26 | using System.Text;
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| 27 | using HEAL.Attic;
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| 28 | using HeuristicLab.Common;
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| 29 | using HeuristicLab.Core;
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| 30 | using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
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| 31 |
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| 32 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic {
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| 33 | [Item("Python String Formatter", "String formatter for string representations of symbolic data analysis expressions in Python syntax.")]
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| 34 | [StorableType("37C1E1DD-437F-414B-AA96-9C6A0F6FEE46")]
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| 35 | public sealed class SymbolicDataAnalysisExpressionPythonFormatter : NamedItem, ISymbolicExpressionTreeStringFormatter {
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| 36 |
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| 37 | [StorableConstructor]
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| 38 | private SymbolicDataAnalysisExpressionPythonFormatter(StorableConstructorFlag _) : base(_) { }
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| 39 | private SymbolicDataAnalysisExpressionPythonFormatter(SymbolicDataAnalysisExpressionPythonFormatter original, Cloner cloner) : base(original, cloner) { }
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| 40 | public SymbolicDataAnalysisExpressionPythonFormatter()
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| 41 | : base() {
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| 42 | Name = ItemName;
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| 43 | Description = ItemDescription;
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| 44 | }
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| 45 |
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| 46 | public override IDeepCloneable Clone(Cloner cloner) => new SymbolicDataAnalysisExpressionPythonFormatter(this, cloner);
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| 47 |
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| 48 | public string Format(ISymbolicExpressionTree symbolicExpressionTree) {
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| 49 | StringBuilder strBuilderModel = new StringBuilder();
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[17919] | 50 | var header = GenerateHeader(symbolicExpressionTree);
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[17855] | 51 | FormatRecursively(symbolicExpressionTree.Root, strBuilderModel);
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[17919] | 52 | return $"{header}{strBuilderModel}";
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[17855] | 53 | }
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| 54 |
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[17919] | 55 | public static string FormatTree(ISymbolicExpressionTree symbolicExpressionTree) {
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| 56 | var formatter = new SymbolicDataAnalysisExpressionPythonFormatter();
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| 57 | return formatter.Format(symbolicExpressionTree);
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| 58 | }
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| 59 |
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[18027] | 60 | private static string GenerateHeader(ISymbolicExpressionTree symbolicExpressionTree) {
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[17855] | 61 | StringBuilder strBuilder = new StringBuilder();
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[17919] | 62 |
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| 63 | ISet<string> variables = new HashSet<string>();
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| 64 | int mathLibCounter = 0;
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| 65 | int statisticLibCounter = 0;
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| 66 | int evaluateIfCounter = 0;
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| 67 |
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| 68 | // iterate tree and search for necessary imports and variable names
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| 69 | foreach (var node in symbolicExpressionTree.IterateNodesPostfix()) {
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| 70 | ISymbol symbol = node.Symbol;
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| 71 | if (symbol is Average) statisticLibCounter++;
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| 72 | else if (symbol is IfThenElse) evaluateIfCounter++;
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| 73 | else if (symbol is Cosine) mathLibCounter++;
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| 74 | else if (symbol is Exponential) mathLibCounter++;
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| 75 | else if (symbol is Logarithm) mathLibCounter++;
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| 76 | else if (symbol is Sine) mathLibCounter++;
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| 77 | else if (symbol is Tangent) mathLibCounter++;
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| 78 | else if (symbol is HyperbolicTangent) mathLibCounter++;
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| 79 | else if (symbol is SquareRoot) mathLibCounter++;
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| 80 | else if (symbol is Power) mathLibCounter++;
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| 81 | else if (symbol is AnalyticQuotient) mathLibCounter++;
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| 82 | else if (node is VariableTreeNode) {
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| 83 | var varNode = node as VariableTreeNode;
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| 84 | var formattedVariable = VariableName2Identifier(varNode.VariableName);
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| 85 | variables.Add(formattedVariable);
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| 86 | }
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| 87 | }
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| 88 |
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| 89 | // generate import section (if necessary)
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| 90 | var importSection = GenerateNecessaryImports(mathLibCounter, statisticLibCounter);
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| 91 | strBuilder.Append(importSection);
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| 92 |
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| 93 | // generate if-then-else helper construct (if necessary)
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| 94 | var ifThenElseSourceSection = GenerateIfThenElseSource(evaluateIfCounter);
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| 95 | strBuilder.Append(ifThenElseSourceSection);
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| 96 |
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| 97 | // generate model evaluation function
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| 98 | var modelEvaluationFunctionSection = GenerateModelEvaluationFunction(variables);
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| 99 | strBuilder.Append(modelEvaluationFunctionSection);
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| 100 |
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[17855] | 101 | return strBuilder.ToString();
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| 102 | }
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| 103 |
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[18027] | 104 | private static string GenerateNecessaryImports(int mathLibCounter, int statisticLibCounter) {
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[17919] | 105 | StringBuilder strBuilder = new StringBuilder();
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| 106 | if (mathLibCounter > 0 || statisticLibCounter > 0) {
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[17860] | 107 | strBuilder.AppendLine("# imports");
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[17919] | 108 | if (mathLibCounter > 0)
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| 109 | strBuilder.AppendLine("import math");
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| 110 | if (statisticLibCounter > 0)
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| 111 | strBuilder.AppendLine("import statistics");
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| 112 | strBuilder.AppendLine();
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| 113 | }
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| 114 | return strBuilder.ToString();
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[17855] | 115 | }
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| 116 |
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[18027] | 117 | private static string GenerateIfThenElseSource(int evaluateIfCounter) {
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[17919] | 118 | StringBuilder strBuilder = new StringBuilder();
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| 119 | if (evaluateIfCounter > 0) {
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[17860] | 120 | strBuilder.AppendLine("# condition helper function");
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| 121 | strBuilder.AppendLine("def evaluate_if(condition, then_path, else_path): ");
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| 122 | strBuilder.AppendLine("\tif condition:");
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| 123 | strBuilder.AppendLine("\t\treturn then_path");
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| 124 | strBuilder.AppendLine("\telse:");
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| 125 | strBuilder.AppendLine("\t\treturn else_path");
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| 126 | }
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[17919] | 127 | return strBuilder.ToString();
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[17855] | 128 | }
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| 129 |
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[18027] | 130 | private static string GenerateModelEvaluationFunction(ISet<string> variables) {
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[17919] | 131 | StringBuilder strBuilder = new StringBuilder();
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[17855] | 132 | strBuilder.Append("def evaluate(");
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[17919] | 133 | var orderedVariables = variables.OrderBy(n => n, new NaturalStringComparer());
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| 134 | foreach (var variable in orderedVariables) {
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| 135 | strBuilder.Append($"{variable}");
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| 136 | if (variable != orderedVariables.Last())
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| 137 | strBuilder.Append(", ");
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[17855] | 138 | }
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| 139 | strBuilder.AppendLine("):");
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| 140 | strBuilder.Append("\treturn ");
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[17919] | 141 | return strBuilder.ToString();
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[17855] | 142 | }
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| 143 |
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[18027] | 144 | private static void FormatRecursively(ISymbolicExpressionTreeNode node, StringBuilder strBuilder) {
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[17855] | 145 | ISymbol symbol = node.Symbol;
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[17919] | 146 | if (symbol is ProgramRootSymbol)
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[17855] | 147 | FormatRecursively(node.GetSubtree(0), strBuilder);
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[17919] | 148 | else if (symbol is StartSymbol)
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[17855] | 149 | FormatRecursively(node.GetSubtree(0), strBuilder);
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[17919] | 150 | else if (symbol is Absolute)
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| 151 | FormatNode(node, strBuilder, "abs");
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| 152 | else if (symbol is Addition)
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[17855] | 153 | FormatNode(node, strBuilder, infixSymbol: " + ");
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[17919] | 154 | else if (symbol is Subtraction)
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| 155 | FormatSubtraction(node, strBuilder);
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| 156 | else if (symbol is Multiplication)
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| 157 | FormatNode(node, strBuilder, infixSymbol: " * ");
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| 158 | else if (symbol is Division)
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| 159 | FormatDivision(node, strBuilder);
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| 160 | else if (symbol is Average)
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[17855] | 161 | FormatNode(node, strBuilder, prefixSymbol: "statistics.mean", openingSymbol: "([", closingSymbol: "])");
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[17919] | 162 | else if (symbol is Sine)
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| 163 | FormatNode(node, strBuilder, "math.sin");
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| 164 | else if (symbol is Cosine)
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[17855] | 165 | FormatNode(node, strBuilder, "math.cos");
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[17919] | 166 | else if (symbol is Tangent)
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| 167 | FormatNode(node, strBuilder, "math.tan");
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| 168 | else if (symbol is HyperbolicTangent)
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| 169 | FormatNode(node, strBuilder, "math.tanh");
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| 170 | else if (symbol is Exponential)
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[17855] | 171 | FormatNode(node, strBuilder, "math.exp");
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[17919] | 172 | else if (symbol is Logarithm)
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[17855] | 173 | FormatNode(node, strBuilder, "math.log");
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[17919] | 174 | else if (symbol is Power)
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| 175 | FormatNode(node, strBuilder, "math.pow");
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| 176 | else if (symbol is Root)
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| 177 | FormatRoot(node, strBuilder);
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| 178 | else if (symbol is Square)
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[17855] | 179 | FormatPower(node, strBuilder, "2");
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[17919] | 180 | else if (symbol is SquareRoot)
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[17855] | 181 | FormatNode(node, strBuilder, "math.sqrt");
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[17919] | 182 | else if (symbol is Cube)
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[17855] | 183 | FormatPower(node, strBuilder, "3");
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[17919] | 184 | else if (symbol is CubeRoot)
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[17855] | 185 | FormatNode(node, strBuilder, closingSymbol: " ** (1. / 3))");
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[17919] | 186 | else if (symbol is AnalyticQuotient)
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| 187 | FormatAnalyticQuotient(node, strBuilder);
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| 188 | else if (symbol is And)
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| 189 | FormatNode(node, strBuilder, infixSymbol: " and ");
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| 190 | else if (symbol is Or)
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| 191 | FormatNode(node, strBuilder, infixSymbol: " or ");
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| 192 | else if (symbol is Xor)
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| 193 | FormatNode(node, strBuilder, infixSymbol: " ^ ");
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| 194 | else if (symbol is Not)
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| 195 | FormatNode(node, strBuilder, "not");
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| 196 | else if (symbol is IfThenElse)
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| 197 | FormatNode(node, strBuilder, "evaluate_if");
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| 198 | else if (symbol is GreaterThan)
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| 199 | FormatNode(node, strBuilder, infixSymbol: " > ");
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| 200 | else if (symbol is LessThan)
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| 201 | FormatNode(node, strBuilder, infixSymbol: " < ");
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| 202 | else if (node is VariableTreeNode)
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| 203 | FormatVariableTreeNode(node, strBuilder);
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| 204 | else if (node is ConstantTreeNode)
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| 205 | FormatConstantTreeNode(node, strBuilder);
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| 206 | else
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| 207 | throw new NotSupportedException("Formatting of symbol: " + symbol + " not supported for Python symbolic expression tree formatter.");
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| 208 | }
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| 209 |
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[18027] | 210 | private static string VariableName2Identifier(string variableName) => variableName.Replace(" ", "_");
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[17919] | 211 |
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[18027] | 212 | private static void FormatNode(ISymbolicExpressionTreeNode node, StringBuilder strBuilder, string prefixSymbol = "", string openingSymbol = "(", string closingSymbol = ")", string infixSymbol = ",") {
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[17919] | 213 | strBuilder.Append($"{prefixSymbol}{openingSymbol}");
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| 214 | foreach (var child in node.Subtrees) {
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| 215 | FormatRecursively(child, strBuilder);
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| 216 | if (child != node.Subtrees.Last())
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| 217 | strBuilder.Append(infixSymbol);
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[17855] | 218 | }
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[17919] | 219 | strBuilder.Append(closingSymbol);
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[17855] | 220 | }
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| 221 |
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[18027] | 222 | private static void FormatVariableTreeNode(ISymbolicExpressionTreeNode node, StringBuilder strBuilder) {
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[17855] | 223 | var varNode = node as VariableTreeNode;
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[17919] | 224 | var formattedVariable = VariableName2Identifier(varNode.VariableName);
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| 225 | var variableWeight = varNode.Weight.ToString("g17", CultureInfo.InvariantCulture);
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| 226 | strBuilder.Append($"{formattedVariable} * {variableWeight}");
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[17855] | 227 | }
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| 228 |
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[18027] | 229 | private static void FormatConstantTreeNode(ISymbolicExpressionTreeNode node, StringBuilder strBuilder) {
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[17855] | 230 | var constNode = node as ConstantTreeNode;
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| 231 | strBuilder.Append(constNode.Value.ToString("g17", CultureInfo.InvariantCulture));
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| 232 | }
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| 233 |
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[18027] | 234 | private static void FormatPower(ISymbolicExpressionTreeNode node, StringBuilder strBuilder, string exponent) {
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[17855] | 235 | strBuilder.Append("math.pow(");
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| 236 | FormatRecursively(node.GetSubtree(0), strBuilder);
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| 237 | strBuilder.Append($", {exponent})");
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| 238 | }
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| 239 |
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[18027] | 240 | private static void FormatRoot(ISymbolicExpressionTreeNode node, StringBuilder strBuilder) {
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[17855] | 241 | strBuilder.Append("math.pow(");
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| 242 | FormatRecursively(node.GetSubtree(0), strBuilder);
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| 243 | strBuilder.Append(", 1.0 / (");
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| 244 | FormatRecursively(node.GetSubtree(1), strBuilder);
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| 245 | strBuilder.Append("))");
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| 246 | }
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| 247 |
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[18027] | 248 | private static void FormatSubtraction(ISymbolicExpressionTreeNode node, StringBuilder strBuilder) {
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[17919] | 249 | if (node.SubtreeCount == 1) {
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| 250 | strBuilder.Append("-");
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| 251 | FormatRecursively(node.GetSubtree(0), strBuilder);
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| 252 | return;
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[17855] | 253 | }
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[17919] | 254 | //Default case: more than 1 child
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| 255 | FormatNode(node, strBuilder, infixSymbol: " - ");
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[17855] | 256 | }
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| 257 |
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[18027] | 258 | private static void FormatDivision(ISymbolicExpressionTreeNode node, StringBuilder strBuilder) {
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[17855] | 259 | strBuilder.Append("(");
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| 260 | if (node.SubtreeCount == 1) {
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| 261 | strBuilder.Append("1.0 / ");
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| 262 | FormatRecursively(node.GetSubtree(0), strBuilder);
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| 263 | } else {
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| 264 | FormatRecursively(node.GetSubtree(0), strBuilder);
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[17919] | 265 | strBuilder.Append(" / (");
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[17855] | 266 | for (int i = 1; i < node.SubtreeCount; i++) {
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| 267 | if (i > 1) strBuilder.Append(" * ");
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| 268 | FormatRecursively(node.GetSubtree(i), strBuilder);
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| 269 | }
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| 270 | strBuilder.Append(")");
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| 271 | }
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| 272 | strBuilder.Append(")");
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| 273 | }
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| 274 |
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[18027] | 275 | private static void FormatAnalyticQuotient(ISymbolicExpressionTreeNode node, StringBuilder strBuilder) {
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[17919] | 276 | strBuilder.Append("(");
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| 277 | FormatRecursively(node.GetSubtree(0), strBuilder);
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| 278 | strBuilder.Append(" / math.sqrt(1 + math.pow(");
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| 279 | FormatRecursively(node.GetSubtree(1), strBuilder);
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| 280 | strBuilder.Append(" , 2) ) )");
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[17855] | 281 | }
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| 282 | }
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| 283 | }
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