source: branches/2974_Constants_Optimization/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/ConstantsOptimization/LMConstantsOptimizer.cs @ 17393

#region License Information
/* HeuristicLab
 * Copyright (C) 2002-2018 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
 *
 * This file is part of HeuristicLab.
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 * HeuristicLab is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
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 * GNU General Public License for more details.
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 * You should have received a copy of the GNU General Public License
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#endregion

using System;
using System.Collections.Generic;
using System.Linq;
using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;

namespace HeuristicLab.Problems.DataAnalysis.Symbolic.ConstantsOptimization {
  public class LMConstantsOptimizer {

    private LMConstantsOptimizer() { }

    /// <summary>
    /// Method to determine whether the numeric constants of the tree can be optimized. This depends primarily on the symbols occuring in the tree.
    /// </summary>
    /// <param name="tree">The tree that should be analyzed</param>
    /// <returns>A flag indicating whether the numeric constants of the tree can be optimized</returns>
    public static bool CanOptimizeConstants(ISymbolicExpressionTree tree) {
      return AutoDiffConverter.IsCompatible(tree);
    }

    /// <summary>
    /// Optimizes the numeric constants in a symbolic expression tree in place.
    /// </summary>
    /// <param name="tree">The tree for which the constants should be optimized</param>
    /// <param name="dataset">The dataset containing the data.</param>
    /// <param name="targetVariable">The target variable name.</param>
    /// <param name="rows">The rows for which the data should be extracted.</param>
    /// <param name="applyLinearScaling">A flag to determine whether linear scaling should be applied during the optimization</param>
    /// <param name="maxIterations">The maximum number of iterations of the Levenberg-Marquardt algorithm.</param>
    /// <returns></returns>
    public static double OptimizeConstants(ISymbolicExpressionTree tree,
      IDataset dataset, string targetVariable, IEnumerable<int> rows,
      bool applyLinearScaling, int maxIterations = 10) {
      if (tree == null) throw new ArgumentNullException("tree");
      if (dataset == null) throw new ArgumentNullException("dataset");
      if (!dataset.ContainsVariable(targetVariable)) throw new ArgumentException("The dataset does not contain the provided target variable.");

      var allVariables = Util.ExtractVariables(tree);
      var numericNodes = Util.ExtractNumericNodes(tree);

      AutoDiff.IParametricCompiledTerm term;
      if (!AutoDiffConverter.TryConvertToAutoDiff(tree, applyLinearScaling, numericNodes, allVariables, out term))
        throw new NotSupportedException("Could not convert symbolic expression tree to an AutoDiff term due to not supported symbols used in the tree.");

      // Variables of the symbolic expression tree correspond to parameters in the term.
      // Hence if no parameters are present we can't do anything and R² stays the same.
      if (term.Parameters.Count == 0) return 0.0;

      var initialConstants = Util.ExtractConstants(numericNodes, applyLinearScaling);
      double[] constants;
      double[,] x = Util.ExtractData(dataset, allVariables, rows);
      double[] y = dataset.GetDoubleValues(targetVariable, rows).ToArray();

      var result = OptimizeConstants(term, initialConstants, x, y, maxIterations, out constants);
      if (result > 0.0 && constants.Length != 0)
        Util.UpdateConstants(numericNodes, constants);

      return result;
    }

    /// <summary>
    /// Optimizes the numeric coefficents of an AutoDiff Term using the Levenberg-Marquardt algorithm.
    /// </summary>
    /// <param name="term">The AutoDiff term for which the numeric coefficients should be optimized.</param>
    /// <param name="initialConstants">The starting values for the numeric coefficients.</param>
    /// <param name="x">The input data for the optimization.</param>
    /// <param name="y">The target values for the optimization.</param>
    /// <param name="maxIterations">The maximum number of iterations of the Levenberg-Marquardt</param>
    /// <param name="constants">The optimized constants.</param>
    /// <param name="LM_IterationCallback">An optional callback for detailed analysis that is called in each algorithm iteration.</param>
    /// <returns>The R² of the term evaluated on the input data x and the target data y using the optimized constants</returns>
    public static double OptimizeConstants(AutoDiff.IParametricCompiledTerm term, double[] initialConstants, double[,] x, double[] y,
      int maxIterations, out double[] constants, Action<double[], double, object> LM_IterationCallback = null) {

      if (term.Parameters.Count == 0) {
        constants = new double[0];
        return 0.0;
      }

      var optimizedConstants = (double[])initialConstants.Clone();
      int numberOfRows = x.GetLength(0);
      int numberOfColumns = x.GetLength(1);
      int numberOfConstants = optimizedConstants.Length;

      alglib.minlmstate state;
      alglib.minlmreport rep;
      alglib.ndimensional_rep xrep = (p, f, obj) => LM_IterationCallback(p, f, obj);

      try {
        alglib.minlmcreatevj(numberOfRows, optimizedConstants, state: out state);
        alglib.minlmsetcond(state, 0.0, 0.0, 0.0, maxIterations);
        alglib.minlmsetxrep(state, LM_IterationCallback != null);
        alglib.minlmoptimize(state, Evaluate, EvaluateGradient, xrep, new object[] { term, x, y });
        alglib.minlmresults(state, out optimizedConstants, out rep);
      } catch (ArithmeticException) {
        constants = new double[0];
        return double.NaN;
      } catch (alglib.alglibexception) {
        constants = new double[0];
        return double.NaN;
      }

      // error 
      if (rep.terminationtype < 0) {
        constants = initialConstants; return 0;
      }
      constants = optimizedConstants;

      // calculate prediction with optimized constants to calculate R²
      double[] pred = new double[numberOfRows];
      double[] zeros = new double[numberOfRows];
      Evaluate(constants, pred, new object[] { term, x, zeros });
      var r = OnlinePearsonsRCalculator.Calculate(pred, y, out OnlineCalculatorError error);
      if (error != OnlineCalculatorError.None) r = 0;
      return r * r;
    }

    private static void Evaluate(double[] c, double[] fi, object o) {
      var objs = (object[])o;
      AutoDiff.IParametricCompiledTerm term = (AutoDiff.IParametricCompiledTerm)objs[0];
      var x = (double[,])objs[1];
      var y = (double[])objs[2];
      double[] xi = new double[x.GetLength(1)];
      for (int i = 0; i < fi.Length; i++) {
        // copy data row
        for (int j = 0; j < xi.Length; j++) xi[j] = x[i, j];
        fi[i] = term.Evaluate(c, xi) - y[i];
      }
    }

    private static void EvaluateGradient(double[] c, double[] fi, double[,] jac, object o) {
      var objs = (object[])o;
      AutoDiff.IParametricCompiledTerm term = (AutoDiff.IParametricCompiledTerm)objs[0];
      var x = (double[,])objs[1];
      var y = (double[])objs[2];
      double[] xi = new double[x.GetLength(1)];
      for (int i = 0; i < fi.Length; i++) {
        // copy data row
        for (int j = 0; j < xi.Length; j++) xi[j] = x[i, j];
        Tuple<double[], double> result = term.Differentiate(c, xi);
        fi[i] = result.Item2 - y[i];
        var g = result.Item1;
        // copy gradient to Jacobian
        for (int j = 0; j < c.Length; j++) {
          jac[i, j] = g[j];
        }
      }
    }
  }
}