1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2018 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System;
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23 | using System.Collections.Generic;
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24 | using System.Linq;
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25 | using System.Text;
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26 | using HeuristicLab.Common;
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27 | using HeuristicLab.Core;
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28 | using HeuristicLab.Data;
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29 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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30 | using HeuristicLab.Random;
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31 |
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32 | namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
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33 | /// <summary>
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34 | /// Manipulates a symbolic expression by duplicating a preexisting function-defining branch.
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35 | /// As described in Koza, Bennett, Andre, Keane, Genetic Programming III - Darwinian Invention and Problem Solving, 1999, pp. 88
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36 | /// </summary>
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37 | [Item("SubroutineDuplicater", "Manipulates a symbolic expression by duplicating a preexisting function-defining branch. As described in Koza, Bennett, Andre, Keane, Genetic Programming III - Darwinian Invention and Problem Solving, 1999, pp. 88")]
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38 | [StorableClass]
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39 | public sealed class SubroutineDuplicater : SymbolicExpressionTreeArchitectureManipulator {
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40 | [StorableConstructor]
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41 | private SubroutineDuplicater(bool deserializing) : base(deserializing) { }
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42 | private SubroutineDuplicater(SubroutineDuplicater original, Cloner cloner)
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43 | : base(original, cloner) {
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44 | }
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45 | public SubroutineDuplicater() : base() { }
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46 |
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47 | public override IDeepCloneable Clone(Cloner cloner) {
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48 | return new SubroutineDuplicater(this, cloner);
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49 | }
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50 |
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51 | public override sealed void ModifyArchitecture(
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52 | IRandom random,
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53 | ISymbolicExpressionTree symbolicExpressionTree,
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54 | IntValue maxFunctionDefinitions, IntValue maxFunctionArguments) {
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55 | DuplicateSubroutine(random, symbolicExpressionTree, maxFunctionDefinitions.Value, maxFunctionArguments.Value);
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56 | }
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57 |
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58 | public static bool DuplicateSubroutine(
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59 | IRandom random,
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60 | ISymbolicExpressionTree symbolicExpressionTree,
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61 | int maxFunctionDefinitions, int maxFunctionArguments) {
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62 | var functionDefiningBranches = symbolicExpressionTree.IterateNodesPrefix().OfType<DefunTreeNode>().ToList();
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63 | if (!functionDefiningBranches.Any() || functionDefiningBranches.Count() == maxFunctionDefinitions)
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64 | // no function defining branches to duplicate or already reached the max number of ADFs
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65 | return false;
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66 |
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67 | string formatString = new StringBuilder().Append('0', (int)Math.Log10(maxFunctionDefinitions) + 1).ToString(); // >= 100 functions => ###
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68 | var allowedFunctionNames = from index in Enumerable.Range(0, maxFunctionDefinitions)
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69 | select "ADF" + index.ToString(formatString);
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70 |
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71 | var selectedBranch = functionDefiningBranches.SampleRandom(random);
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72 | var duplicatedDefunBranch = (DefunTreeNode)selectedBranch.Clone();
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73 | string newFunctionName = allowedFunctionNames.Except(UsedFunctionNames(symbolicExpressionTree)).First();
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74 | duplicatedDefunBranch.FunctionName = newFunctionName;
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75 | symbolicExpressionTree.Root.AddSubtree(duplicatedDefunBranch);
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76 | duplicatedDefunBranch.SetGrammar((ISymbolicExpressionTreeGrammar)selectedBranch.Grammar.Clone());
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77 |
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78 | var allowedChildSymbols = selectedBranch.Grammar.GetAllowedChildSymbols(selectedBranch.Symbol);
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79 | foreach (var allowedChildSymbol in allowedChildSymbols)
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80 | duplicatedDefunBranch.Grammar.AddAllowedChildSymbol(duplicatedDefunBranch.Symbol, allowedChildSymbol);
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81 | var maxSubtrees = selectedBranch.Grammar.GetMaximumSubtreeCount(selectedBranch.Symbol);
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82 | for (int i = 0; i < maxSubtrees; i++) {
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83 | foreach (var allowedChildSymbol in selectedBranch.Grammar.GetAllowedChildSymbols(selectedBranch.Symbol, i))
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84 | duplicatedDefunBranch.Grammar.AddAllowedChildSymbol(duplicatedDefunBranch.Symbol, allowedChildSymbol);
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85 | }
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86 |
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87 | // add an invoke symbol for each branch that is allowed to invoke the original function
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88 | foreach (var subtree in symbolicExpressionTree.Root.Subtrees.OfType<SymbolicExpressionTreeTopLevelNode>()) {
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89 | var matchingInvokeSymbol = (from symb in subtree.Grammar.Symbols.OfType<InvokeFunction>()
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90 | where symb.FunctionName == selectedBranch.FunctionName
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91 | select symb).SingleOrDefault();
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92 | if (matchingInvokeSymbol != null) {
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93 | var invokeSymbol = new InvokeFunction(duplicatedDefunBranch.FunctionName);
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94 | subtree.Grammar.AddSymbol(invokeSymbol);
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95 | subtree.Grammar.SetSubtreeCount(invokeSymbol, duplicatedDefunBranch.NumberOfArguments, duplicatedDefunBranch.NumberOfArguments);
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96 |
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97 | foreach (ISymbol symbol in subtree.Grammar.Symbols) {
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98 | if (subtree.Grammar.IsAllowedChildSymbol(symbol, matchingInvokeSymbol))
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99 | subtree.Grammar.AddAllowedChildSymbol(symbol, invokeSymbol);
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100 | else {
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101 | for (int i = 0; i < subtree.Grammar.GetMaximumSubtreeCount(symbol); i++)
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102 | if (subtree.Grammar.IsAllowedChildSymbol(symbol, matchingInvokeSymbol, i))
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103 | subtree.Grammar.AddAllowedChildSymbol(symbol, invokeSymbol, i);
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104 | }
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105 | }
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106 |
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107 | foreach (ISymbol symbol in subtree.Grammar.GetAllowedChildSymbols(matchingInvokeSymbol))
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108 | if (symbol != invokeSymbol) //avoid duplicate entry invokesymbol / invokesymbol
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109 | subtree.Grammar.AddAllowedChildSymbol(invokeSymbol, symbol);
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110 | for (int i = 0; i < subtree.Grammar.GetMaximumSubtreeCount(matchingInvokeSymbol); i++) {
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111 | foreach (ISymbol symbol in subtree.Grammar.GetAllowedChildSymbols(matchingInvokeSymbol, i).Except(subtree.Grammar.GetAllowedChildSymbols(matchingInvokeSymbol)))
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112 | subtree.Grammar.AddAllowedChildSymbol(invokeSymbol, symbol, i);
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113 | }
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114 | }
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115 | // in the current subtree:
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116 | // for all invoke nodes of the original function replace the invoke of the original function with an invoke of the new function randomly
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117 | var originalFunctionInvocations = from node in subtree.IterateNodesPrefix().OfType<InvokeFunctionTreeNode>()
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118 | where node.Symbol.FunctionName == selectedBranch.FunctionName
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119 | select node;
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120 | foreach (var originalFunctionInvokeNode in originalFunctionInvocations) {
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121 | var newInvokeSymbol = (from symb in subtree.Grammar.Symbols.OfType<InvokeFunction>()
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122 | where symb.FunctionName == duplicatedDefunBranch.FunctionName
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123 | select symb).Single();
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124 | // flip coin wether to replace with newly defined function
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125 | if (random.NextDouble() < 0.5) {
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126 | originalFunctionInvokeNode.Symbol = newInvokeSymbol;
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127 | }
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128 | }
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129 | }
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130 | return true;
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131 | }
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132 |
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133 | private static IEnumerable<string> UsedFunctionNames(ISymbolicExpressionTree symbolicExpressionTree) {
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134 | return from node in symbolicExpressionTree.IterateNodesPrefix()
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135 | where node.Symbol is Defun
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136 | select ((DefunTreeNode)node).FunctionName;
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137 | }
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138 | }
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139 | }
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