1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2018 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System.Collections.Generic;
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23 | using System.Linq;
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24 | using HeuristicLab.Common;
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25 | using HeuristicLab.Core;
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26 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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27 |
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28 | namespace HeuristicLab.Algorithms.DataAnalysis {
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29 | [StorableClass]
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30 | [Item(Name = "MeanProduct", Description = "Product of mean functions for Gaussian processes.")]
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31 | public sealed class MeanProduct : Item, IMeanFunction {
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32 | [Storable]
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33 | private ItemList<IMeanFunction> factors;
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34 |
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35 | [Storable]
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36 | private int numberOfVariables;
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37 |
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38 | public ItemList<IMeanFunction> Factors {
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39 | get { return factors; }
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40 | }
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41 |
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42 | [StorableConstructor]
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43 | private MeanProduct(bool deserializing)
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44 | : base(deserializing) {
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45 | }
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46 |
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47 | private MeanProduct(MeanProduct original, Cloner cloner)
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48 | : base(original, cloner) {
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49 | this.factors = cloner.Clone(original.factors);
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50 | this.numberOfVariables = original.numberOfVariables;
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51 | }
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52 |
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53 | public MeanProduct() {
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54 | this.factors = new ItemList<IMeanFunction>();
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55 | }
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56 | public override IDeepCloneable Clone(Cloner cloner) {
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57 | return new MeanProduct(this, cloner);
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58 | }
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59 |
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60 | public int GetNumberOfParameters(int numberOfVariables) {
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61 | this.numberOfVariables = numberOfVariables;
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62 | return factors.Select(t => t.GetNumberOfParameters(numberOfVariables)).Sum();
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63 | }
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64 |
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65 | public void SetParameter(double[] p) {
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66 | int offset = 0;
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67 | foreach (var t in factors) {
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68 | var numberOfParameters = t.GetNumberOfParameters(numberOfVariables);
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69 | t.SetParameter(p.Skip(offset).Take(numberOfParameters).ToArray());
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70 | offset += numberOfParameters;
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71 | }
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72 | }
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73 |
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74 |
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75 | public ParameterizedMeanFunction GetParameterizedMeanFunction(double[] p, int[] columnIndices) {
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76 | var factorMf = new List<ParameterizedMeanFunction>();
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77 | int totalNumberOfParameters = GetNumberOfParameters(numberOfVariables);
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78 | int[] factorIndexMap = new int[totalNumberOfParameters]; // maps k-th hyperparameter to the correct mean-term
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79 | int[] hyperParameterIndexMap = new int[totalNumberOfParameters]; // maps k-th hyperparameter to the l-th hyperparameter of the correct mean-term
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80 | int c = 0;
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81 | // get the parameterized mean function for each term
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82 | for (int factorIndex = 0; factorIndex < factors.Count; factorIndex++) {
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83 | var numberOfParameters = factors[factorIndex].GetNumberOfParameters(numberOfVariables);
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84 | factorMf.Add(factors[factorIndex].GetParameterizedMeanFunction(p.Take(numberOfParameters).ToArray(), columnIndices));
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85 | p = p.Skip(numberOfParameters).ToArray();
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86 |
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87 | for (int hyperParameterIndex = 0; hyperParameterIndex < numberOfParameters; hyperParameterIndex++) {
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88 | factorIndexMap[c] = factorIndex;
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89 | hyperParameterIndexMap[c] = hyperParameterIndex;
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90 | c++;
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91 | }
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92 | }
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93 |
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94 | var mf = new ParameterizedMeanFunction();
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95 | mf.Mean = (x, i) => factorMf.Select(t => t.Mean(x, i)).Aggregate((a, b) => a * b);
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96 | mf.Gradient = (x, i, k) => {
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97 | double result = 1.0;
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98 | int hyperParameterFactorIndex = factorIndexMap[k];
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99 | for (int factorIndex = 0; factorIndex < factors.Count; factorIndex++) {
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100 | if (factorIndex == hyperParameterFactorIndex) {
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101 | // multiply gradient
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102 | result *= factorMf[factorIndex].Gradient(x, i, hyperParameterIndexMap[k]);
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103 | } else {
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104 | // multiply mean
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105 | result *= factorMf[factorIndex].Mean(x, i);
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106 | }
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107 | }
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108 | return result;
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109 | };
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110 | return mf;
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111 | }
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112 | }
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113 | }
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