1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2016 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 | using System;
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22 | using System.Collections.Generic;
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23 | using System.Diagnostics.Contracts;
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24 | using System.Linq;
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25 |
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26 | namespace HeuristicLab.Algorithms.DataAnalysis.MctsSymbolicRegression {
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27 | // evaluates expressions (on vectors)
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28 | internal class ExpressionEvaluator {
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29 | // manages it's own vector buffers
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30 | private readonly double[][] vectorBuffers;
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31 | private readonly double[][] scalarBuffers; // scalars are vectors of length 1 (to allow mixing scalars and vectors on the same stack)
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32 | private int lastVecBufIdx;
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33 | private int lastScalarBufIdx;
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34 |
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35 |
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36 | private double[] GetVectorBuffer() {
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37 | return vectorBuffers[--lastVecBufIdx];
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38 | }
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39 | private double[] GetScalarBuffer() {
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40 | return scalarBuffers[--lastScalarBufIdx];
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41 | }
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42 |
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43 | private void ReleaseBuffer(double[] buf) {
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44 | if (buf.Length == 1) {
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45 | scalarBuffers[lastScalarBufIdx++] = buf;
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46 | } else {
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47 | vectorBuffers[lastVecBufIdx++] = buf;
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48 | }
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49 | }
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50 |
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51 | public const int MaxStackSize = 100;
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52 | public const int MaxParams = 50;
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53 | private readonly int vLen;
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54 | private readonly double lowerEstimationLimit;
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55 | private readonly double upperEstimationLimit;
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56 | private readonly double nanReplacementValue;
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57 |
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58 | private readonly double[][] stack;
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59 | private readonly double[][][] gradientStack;
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60 |
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61 | // preallocate stack and gradient stack
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62 | public ExpressionEvaluator(int vLen, double lowerEstimationLimit = double.MinValue, double upperEstimationLimit = double.MaxValue) {
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63 | if (vLen <= 1) throw new ArgumentException("number of elements in a variable must be > 1", "vlen");
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64 | this.vLen = vLen;
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65 | this.lowerEstimationLimit = lowerEstimationLimit;
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66 | this.upperEstimationLimit = upperEstimationLimit;
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67 | this.nanReplacementValue = (upperEstimationLimit - lowerEstimationLimit) / 2.0 + lowerEstimationLimit;
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68 |
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69 | stack = new double[MaxStackSize][];
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70 | gradientStack = new double[MaxParams][][];
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71 |
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72 | for (int k = 0; k < MaxParams; k++) {
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73 | gradientStack[k] = new double[MaxStackSize][];
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74 | }
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75 |
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76 | // preallocate buffers
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77 | vectorBuffers = new double[MaxStackSize * (1 + MaxParams)][];
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78 | scalarBuffers = new double[MaxStackSize * (1 + MaxParams)][];
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79 | for (int i = 0; i < MaxStackSize; i++) {
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80 | ReleaseBuffer(new double[vLen]);
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81 | ReleaseBuffer(new double[1]);
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82 |
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83 | for (int k = 0; k < MaxParams; k++) {
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84 | ReleaseBuffer(new double[vLen]);
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85 | ReleaseBuffer(new double[1]);
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86 | }
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87 | }
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88 | }
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89 |
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90 | // pred must be allocated by the caller
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91 | // if adjustOffsetForLogAndExp is set to true we determine c in log(c + f(x)) to make sure that c + f(x) is positive
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92 | public void Exec(byte[] code, double[][] vars, double[] consts, double[] pred, bool adjustOffsetForLogAndExp = false) {
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93 | Contract.Assert(pred != null && pred.Length >= vLen);
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94 | int topOfStack = -1;
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95 | int pc = 0;
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96 | int curParamIdx = -1;
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97 | byte op;
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98 | short arg;
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99 | // checked at the end to make sure we do not leak buffers
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100 | int initialScalarCount = lastScalarBufIdx;
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101 | int initialVectorCount = lastVecBufIdx;
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102 |
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103 | while (true) {
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104 | ReadNext(code, ref pc, out op, out arg);
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105 | switch (op) {
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106 | case (byte)OpCodes.Nop: throw new InvalidProgramException(); // not allowed
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107 | case (byte)OpCodes.LoadConst0: {
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108 | ++topOfStack;
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109 | var z = GetScalarBuffer();
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110 | z[0] = 0;
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111 | stack[topOfStack] = z;
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112 | break;
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113 | }
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114 | case (byte)OpCodes.LoadConst1: {
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115 | ++topOfStack;
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116 | var z = GetScalarBuffer();
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117 | z[0] = 1.0;
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118 | stack[topOfStack] = z;
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119 | break;
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120 | }
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121 | case (byte)OpCodes.LoadParamN: {
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122 | ++topOfStack;
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123 | var c = consts[++curParamIdx];
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124 | var z = GetScalarBuffer();
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125 | z[0] = c;
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126 | stack[topOfStack] = z;
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127 | break;
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128 | }
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129 | case (byte)OpCodes.LoadVar: {
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130 | ++topOfStack;
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131 | var z = GetVectorBuffer();
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132 | Array.Copy(vars[arg], z, vars[arg].Length);
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133 | stack[topOfStack] = z;
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134 | break;
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135 | }
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136 | case (byte)OpCodes.Add: {
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137 | topOfStack--;
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138 | var a = stack[topOfStack + 1];
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139 | var b = stack[topOfStack];
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140 | stack[topOfStack] = Add(a, b);
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141 | ReleaseBuffer(a);
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142 | ReleaseBuffer(b);
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143 | break;
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144 | }
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145 | case (byte)OpCodes.Mul: {
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146 | topOfStack--;
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147 | var a = stack[topOfStack + 1];
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148 | var b = stack[topOfStack];
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149 | stack[topOfStack] = Mul(a, b);
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150 | ReleaseBuffer(a);
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151 | ReleaseBuffer(b);
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152 | break;
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153 | }
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154 | case (byte)OpCodes.Log: {
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155 | if (adjustOffsetForLogAndExp) {
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156 | // here we assume that the last used parameter is c in log(f(x) + c)
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157 | // this must match actions for producing code in the automaton!
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158 |
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159 | // we can easily adjust c to make sure that f(x) + c is positive because at this point we all values for f(x)
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160 | var fxc = stack[topOfStack];
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161 | var minFx = fxc.Min() - consts[curParamIdx]; // stack[topOfStack] is f(x) + c
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162 |
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163 | // adjust c so that minFx + c = e and therefore log(minFx + c) = log(e) = 1
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164 | // this initialization works in combination with the gradient check (instead of initializing such that log(minFx + c) = 0
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165 | var delta = Math.E - minFx - consts[curParamIdx];
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166 | consts[curParamIdx] += delta;
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167 |
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168 | // also adjust values on stack
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169 | for (int i = 0; i < fxc.Length; i++) fxc[i] += delta;
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170 | }
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171 | var x = stack[topOfStack];
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172 | for (int i = 0; i < x.Length; i++)
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173 | x[i] = Math.Log(x[i]);
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174 | break;
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175 | }
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176 | case (byte)OpCodes.Exp: {
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177 | if (adjustOffsetForLogAndExp) {
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178 | // here we assume that the last used parameter is c in exp(f(x) * c)
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179 | // this must match actions for producing code in the automaton!
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180 |
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181 | // adjust c to make sure that exp(f(x) * c) is not too large
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182 | var fxc = stack[topOfStack];
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183 | var maxFx = fxc.Max() / consts[curParamIdx]; // stack[topOfStack] is f(x) * c
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184 |
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185 | var f = 1.0 / (maxFx * consts[curParamIdx]);
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186 | // adjust c so that maxFx*c = 1 TODO: this is not ideal as it enforces positive arguments to exp()
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187 | consts[curParamIdx] *= f;
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188 |
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189 | // also adjust values on stack
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190 | for (int i = 0; i < fxc.Length; i++) fxc[i] *= f;
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191 | }
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192 |
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193 | var x = stack[topOfStack];
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194 | for (int i = 0; i < x.Length; i++)
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195 | x[i] = Math.Exp(x[i]);
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196 | break;
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197 | }
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198 | case (byte)OpCodes.Inv: {
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199 | var x = stack[topOfStack];
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200 | for (int i = 0; i < x.Length; i++)
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201 | x[i] = 1.0 / (x[i]);
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202 | break;
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203 | }
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204 | case (byte)OpCodes.Exit:
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205 | Contract.Assert(topOfStack == 0);
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206 | var r = stack[topOfStack];
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207 | if (r.Length == 1) {
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208 | var v = double.IsNaN(r[0]) ? nanReplacementValue : Math.Min(upperEstimationLimit, Math.Max(lowerEstimationLimit, r[0]));
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209 | for (int i = 0; i < vLen; i++)
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210 | pred[i] = v;
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211 | } else {
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212 | for (int i = 0; i < vLen; i++) {
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213 | var v = double.IsNaN(r[i]) ? nanReplacementValue : Math.Min(upperEstimationLimit, Math.Max(lowerEstimationLimit, r[i]));
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214 | pred[i] = v;
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215 | }
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216 | }
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217 | ReleaseBuffer(r);
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218 | Contract.Assert(lastVecBufIdx == initialVectorCount);
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219 | Contract.Assert(lastScalarBufIdx == initialScalarCount);
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220 | return;
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221 | }
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222 | }
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223 | }
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224 |
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225 |
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226 | // evaluation with forward autodiff
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227 | // pred and gradients must be allocated by the caller
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228 | public void ExecGradient(byte[] code, double[][] vars, double[] consts, double[] pred, double[][] gradients) {
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229 | Contract.Assert(pred != null && pred.Length >= vLen);
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230 | int topOfStack = -1;
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231 | int pc = 0;
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232 | int curParamIdx = -1;
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233 | byte op;
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234 | short arg;
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235 | int nParams = consts.Length;
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236 | Contract.Assert(gradients != null && gradients.Length >= nParams && gradients.All(g => g.Length >= vLen));
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237 |
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238 | // checked at the end to make sure we do not leak buffers
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239 | int initialScalarCount = lastScalarBufIdx;
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240 | int initialVectorCount = lastVecBufIdx;
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241 |
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242 | while (true) {
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243 | ReadNext(code, ref pc, out op, out arg);
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244 | switch (op) {
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245 | case (byte)OpCodes.Nop: throw new InvalidProgramException(); // not allowed
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246 | case (byte)OpCodes.LoadConst0: {
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247 | ++topOfStack;
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248 | var z = GetScalarBuffer();
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249 | z[0] = 0;
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250 | stack[topOfStack] = z;
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251 | for (int k = 0; k < nParams; ++k) {
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252 | var b = GetScalarBuffer();
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253 | b[0] = 0.0;
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254 | gradientStack[k][topOfStack] = b;
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255 | }
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256 | break;
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257 | }
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258 | case (byte)OpCodes.LoadConst1: {
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259 | ++topOfStack;
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260 | var z = GetScalarBuffer();
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261 | z[0] = 1.0;
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262 | stack[topOfStack] = z;
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263 | for (int k = 0; k < nParams; ++k) {
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264 | var b = GetScalarBuffer();
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265 | b[0] = 0.0;
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266 | gradientStack[k][topOfStack] = b;
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267 | }
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268 | break;
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269 | }
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270 | case (byte)OpCodes.LoadParamN: {
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271 | var c = consts[++curParamIdx];
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272 | ++topOfStack;
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273 | var z = GetScalarBuffer();
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274 | z[0] = c;
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275 | stack[topOfStack] = z;
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276 | for (int k = 0; k < nParams; ++k) {
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277 | var b = GetScalarBuffer();
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278 | b[0] = k == curParamIdx ? 1.0 : 0.0;
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279 | gradientStack[k][topOfStack] = b;
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280 | }
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281 | break;
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282 | }
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283 | case (byte)OpCodes.LoadVar: {
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284 | ++topOfStack;
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285 | var z = GetVectorBuffer();
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286 | Array.Copy(vars[arg], z, vars[arg].Length);
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287 | stack[topOfStack] = z;
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288 | for (int k = 0; k < nParams; ++k) {
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289 | var b = GetScalarBuffer();
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290 | b[0] = 0.0;
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291 | gradientStack[k][topOfStack] = b;
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292 | }
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293 | }
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294 | break;
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295 | case (byte)OpCodes.Add: {
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296 | topOfStack--;
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297 | var a = stack[topOfStack + 1];
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298 | var b = stack[topOfStack];
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299 | stack[topOfStack] = Add(a, b);
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300 | ReleaseBuffer(a);
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301 | ReleaseBuffer(b);
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302 |
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303 | // same for gradient
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304 | for (int k = 0; k < nParams; ++k) {
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305 | var ag = gradientStack[k][topOfStack + 1];
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306 | var bg = gradientStack[k][topOfStack];
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307 | gradientStack[k][topOfStack] = Add(ag, bg);
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308 | ReleaseBuffer(ag);
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309 | ReleaseBuffer(bg);
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310 | }
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311 | break;
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312 | }
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313 | case (byte)OpCodes.Mul: {
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314 | topOfStack--;
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315 | var a = stack[topOfStack + 1];
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316 | var b = stack[topOfStack];
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317 | stack[topOfStack] = Mul(a, b);
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318 |
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319 | // same for gradient
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320 | // f(x) g(x) f '(x) g(x) + f(x) g'(x)
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321 | for (int k = 0; k < nParams; ++k) {
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322 | var ag = gradientStack[k][topOfStack + 1];
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323 | var bg = gradientStack[k][topOfStack];
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324 | var t1 = Mul(ag, b);
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325 | var t2 = Mul(a, bg);
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326 | gradientStack[k][topOfStack] = Add(t1, t2);
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327 | ReleaseBuffer(ag);
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328 | ReleaseBuffer(bg);
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329 | ReleaseBuffer(t1);
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330 | ReleaseBuffer(t2);
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331 | }
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332 |
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333 | ReleaseBuffer(a);
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334 | ReleaseBuffer(b);
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335 |
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336 | break;
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337 | }
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338 | case (byte)OpCodes.Log: {
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339 | var x = stack[topOfStack];
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340 | // calc gradients first before destroying x
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341 | // log(f(x))' = f(x)'/f(x)
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342 | for (int k = 0; k < nParams; k++) {
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343 | var xg = gradientStack[k][topOfStack];
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344 | gradientStack[k][topOfStack] = Frac(xg, x);
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345 | ReleaseBuffer(xg);
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346 | }
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347 |
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348 | for (int i = 0; i < x.Length; i++)
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349 | x[i] = Math.Log(x[i]);
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350 |
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351 | break;
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352 | }
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353 | case (byte)OpCodes.Exp: {
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354 | var x = stack[topOfStack];
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355 | for (int i = 0; i < x.Length; i++)
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356 | x[i] = Math.Exp(x[i]);
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357 |
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358 | for (int k = 0; k < nParams; k++) {
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359 | var xg = gradientStack[k][topOfStack];
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360 | gradientStack[k][topOfStack] = Mul(x, xg); // e(f(x))' = e(f(x)) * f(x)'
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361 | ReleaseBuffer(xg);
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362 | }
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363 | break;
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364 | }
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365 | case (byte)OpCodes.Inv: {
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366 | var x = stack[topOfStack];
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367 | for (int i = 0; i < x.Length; i++)
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368 | x[i] = 1.0 / x[i];
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369 |
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370 | for (int k = 0; k < nParams; k++) {
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371 | var xg = gradientStack[k][topOfStack];
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372 | // x has already been inverted above
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373 | // (1/f)' = -f' / f²
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374 | var invF = Mul(xg, x);
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375 | gradientStack[k][topOfStack] = Mul(invF, x, factor: -1.0);
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376 | ReleaseBuffer(xg);
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377 | ReleaseBuffer(invF);
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378 | }
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379 | break;
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380 | }
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381 | case (byte)OpCodes.Exit:
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382 | Contract.Assert(topOfStack == 0);
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383 | var r = stack[topOfStack];
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384 | if (r.Length == 1) {
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385 | var v = double.IsNaN(r[0]) ? nanReplacementValue : Math.Min(upperEstimationLimit, Math.Max(lowerEstimationLimit, r[0]));
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386 | for (int i = 0; i < vLen; i++)
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387 | pred[i] = v;
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388 | } else {
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389 | for (int i = 0; i < vLen; i++) {
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390 | var v = double.IsNaN(r[i]) ? nanReplacementValue : Math.Min(upperEstimationLimit, Math.Max(lowerEstimationLimit, r[i]));
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391 | pred[i] = v;
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392 | }
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393 | }
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394 | ReleaseBuffer(r);
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395 |
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396 | // same for gradients
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397 | for (int k = 0; k < nParams; k++) {
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398 | var g = gradientStack[k][topOfStack];
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399 | if (g.Length == 1) {
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400 | for (int i = 0; i < vLen; i++)
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401 | gradients[k][i] = g[0];
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402 | } else
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403 | Array.Copy(g, gradients[k], vLen);
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404 | ReleaseBuffer(g);
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405 | }
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406 |
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407 | Contract.Assert(lastVecBufIdx == initialVectorCount);
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408 | Contract.Assert(lastScalarBufIdx == initialScalarCount);
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409 | return; // break loop
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410 | }
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411 | }
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412 | }
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413 |
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414 | private double[] Add(double[] a, double[] b) {
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415 | double[] target = null;
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416 | if (a.Length > 1) {
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417 | target = GetVectorBuffer();
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418 | if (b.Length > 1) {
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419 | for (int i = 0; i < vLen; i++)
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420 | target[i] = a[i] + b[i];
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421 | } else {
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422 | // b == scalar
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423 | for (int i = 0; i < vLen; i++)
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424 | target[i] = a[i] + b[0];
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425 | }
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426 | } else {
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427 | // a == scalar
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428 | if (b.Length > 1) {
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429 | target = GetVectorBuffer();
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430 | for (int i = 0; i < vLen; i++)
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431 | target[i] = a[0] + b[i];
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432 | } else {
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433 | // b == scalar
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434 | target = GetScalarBuffer();
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435 | target[0] = a[0] + b[0];
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436 | }
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437 | }
|
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438 | return target;
|
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439 | }
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440 |
|
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441 | private double[] Mul(double[] a, double[] b, double factor = 1.0) {
|
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442 | double[] target = null;
|
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443 | if (a.Length > 1) {
|
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444 | if (b.Length > 1) {
|
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445 | target = GetVectorBuffer();
|
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446 | for (int i = 0; i < vLen; i++)
|
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447 | target[i] = factor * a[i] * b[i];
|
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448 | } else {
|
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449 | // b == scalar
|
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450 | if (Math.Abs(b[0]) < 1E-12 /* == 0 */) {
|
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451 | target = GetScalarBuffer();
|
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452 | target[0] = 0.0;
|
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453 | } else {
|
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454 | target = GetVectorBuffer();
|
---|
455 | for (int i = 0; i < vLen; i++)
|
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456 | target[i] = factor * a[i] * b[0];
|
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457 | }
|
---|
458 | }
|
---|
459 | } else {
|
---|
460 | // a == scalar
|
---|
461 | if (b.Length > 1) {
|
---|
462 | if (Math.Abs(a[0]) < 1E-12 /* == 0 */) {
|
---|
463 | target = GetScalarBuffer();
|
---|
464 | target[0] = 0.0;
|
---|
465 | } else {
|
---|
466 | target = GetVectorBuffer();
|
---|
467 | for (int i = 0; i < vLen; i++)
|
---|
468 | target[i] = factor * a[0] * b[i];
|
---|
469 | }
|
---|
470 | } else {
|
---|
471 | // b == scalar
|
---|
472 | target = GetScalarBuffer();
|
---|
473 | target[0] = factor * a[0] * b[0];
|
---|
474 | }
|
---|
475 | }
|
---|
476 | return target;
|
---|
477 | }
|
---|
478 |
|
---|
479 | private double[] Frac(double[] a, double[] b) {
|
---|
480 | double[] target = null;
|
---|
481 | if (a.Length > 1) {
|
---|
482 | target = GetVectorBuffer();
|
---|
483 | if (b.Length > 1) {
|
---|
484 | for (int i = 0; i < vLen; i++)
|
---|
485 | target[i] = a[i] / b[i];
|
---|
486 | } else {
|
---|
487 | // b == scalar
|
---|
488 | for (int i = 0; i < vLen; i++)
|
---|
489 | target[i] = a[i] / b[0];
|
---|
490 | }
|
---|
491 | } else {
|
---|
492 | // a == scalar
|
---|
493 | if (b.Length > 1) {
|
---|
494 | if (Math.Abs(a[0]) < 1E-12 /* == 0 */) {
|
---|
495 | target = GetScalarBuffer();
|
---|
496 | target[0] = 0.0;
|
---|
497 | } else {
|
---|
498 | target = GetVectorBuffer();
|
---|
499 | for (int i = 0; i < vLen; i++)
|
---|
500 | target[i] = a[0] / b[i];
|
---|
501 | }
|
---|
502 | } else {
|
---|
503 | // b == scalar
|
---|
504 | target = GetScalarBuffer();
|
---|
505 | target[0] = a[0] / b[0];
|
---|
506 | }
|
---|
507 | }
|
---|
508 | return target;
|
---|
509 | }
|
---|
510 |
|
---|
511 | private void ReadNext(byte[] code, ref int pc, out byte op, out short s) {
|
---|
512 | op = code[pc++];
|
---|
513 | s = 0;
|
---|
514 | if (op == (byte)OpCodes.LoadVar) {
|
---|
515 | s = (short)((code[pc] << 8) | code[pc + 1]);
|
---|
516 | pc += 2;
|
---|
517 | }
|
---|
518 | }
|
---|
519 | }
|
---|
520 | }
|
---|