[4271] | 1 | #region License Information
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| 2 | /* HeuristicLab
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[16723] | 3 | * Copyright (C) 2002-2019 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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[4271] | 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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[5907] | 22 | using System.Collections.Generic;
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[4271] | 23 | using System.Linq;
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| 24 | using HeuristicLab.Analysis;
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[4272] | 25 | using HeuristicLab.Common;
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[4271] | 26 | using HeuristicLab.Core;
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| 27 | using HeuristicLab.Data;
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| 28 | using HeuristicLab.Optimization;
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| 29 | using HeuristicLab.Parameters;
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[16723] | 30 | using HEAL.Attic;
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[4271] | 31 |
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[5747] | 32 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic.Classification {
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| 33 | [Item("SymbolicClassificationSingleObjectiveOverfittingAnalyzer", "Calculates and tracks correlation of training and validation fitness of symbolic classification models.")]
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[16723] | 34 | [StorableType("551DB3E3-56F8-4E92-B538-D453DBA23D77")]
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[5747] | 35 | public sealed class SymbolicClassificationSingleObjectiveOverfittingAnalyzer : SymbolicDataAnalysisSingleObjectiveValidationAnalyzer<ISymbolicClassificationSingleObjectiveEvaluator, IClassificationProblemData> {
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| 36 | private const string TrainingValidationCorrelationParameterName = "Training and validation fitness correlation";
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| 37 | private const string TrainingValidationCorrelationTableParameterName = "Training and validation fitness correlation table";
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[5192] | 38 | private const string LowerCorrelationThresholdParameterName = "LowerCorrelationThreshold";
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| 39 | private const string UpperCorrelationThresholdParameterName = "UpperCorrelationThreshold";
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| 40 | private const string OverfittingParameterName = "IsOverfitting";
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[4271] | 41 |
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| 42 | #region parameter properties
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| 43 | public ILookupParameter<DoubleValue> TrainingValidationQualityCorrelationParameter {
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[5192] | 44 | get { return (ILookupParameter<DoubleValue>)Parameters[TrainingValidationCorrelationParameterName]; }
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[4271] | 45 | }
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[5192] | 46 | public ILookupParameter<DataTable> TrainingValidationQualityCorrelationTableParameter {
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| 47 | get { return (ILookupParameter<DataTable>)Parameters[TrainingValidationCorrelationTableParameterName]; }
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[4271] | 48 | }
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[5192] | 49 | public IValueLookupParameter<DoubleValue> LowerCorrelationThresholdParameter {
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| 50 | get { return (IValueLookupParameter<DoubleValue>)Parameters[LowerCorrelationThresholdParameterName]; }
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[4326] | 51 | }
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[5192] | 52 | public IValueLookupParameter<DoubleValue> UpperCorrelationThresholdParameter {
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| 53 | get { return (IValueLookupParameter<DoubleValue>)Parameters[UpperCorrelationThresholdParameterName]; }
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| 54 | }
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[4271] | 55 | public ILookupParameter<BoolValue> OverfittingParameter {
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[5192] | 56 | get { return (ILookupParameter<BoolValue>)Parameters[OverfittingParameterName]; }
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[4271] | 57 | }
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| 58 | #endregion
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| 59 |
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[5192] | 60 | [StorableConstructor]
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[16723] | 61 | private SymbolicClassificationSingleObjectiveOverfittingAnalyzer(StorableConstructorFlag _) : base(_) { }
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[5747] | 62 | private SymbolicClassificationSingleObjectiveOverfittingAnalyzer(SymbolicClassificationSingleObjectiveOverfittingAnalyzer original, Cloner cloner) : base(original, cloner) { }
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| 63 | public SymbolicClassificationSingleObjectiveOverfittingAnalyzer()
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[4271] | 64 | : base() {
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[5192] | 65 | Parameters.Add(new LookupParameter<DoubleValue>(TrainingValidationCorrelationParameterName, "Correlation of training and validation fitnesses"));
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| 66 | Parameters.Add(new LookupParameter<DataTable>(TrainingValidationCorrelationTableParameterName, "Data table of training and validation fitness correlation values over the whole run."));
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| 67 | Parameters.Add(new ValueLookupParameter<DoubleValue>(LowerCorrelationThresholdParameterName, "Lower threshold for correlation value that marks the boundary from non-overfitting to overfitting.", new DoubleValue(0.65)));
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| 68 | Parameters.Add(new ValueLookupParameter<DoubleValue>(UpperCorrelationThresholdParameterName, "Upper threshold for correlation value that marks the boundary from overfitting to non-overfitting.", new DoubleValue(0.75)));
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| 69 | Parameters.Add(new LookupParameter<BoolValue>(OverfittingParameterName, "Boolean indicator for overfitting."));
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[4271] | 70 | }
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| 71 |
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[5192] | 72 | public override IDeepCloneable Clone(Cloner cloner) {
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[5747] | 73 | return new SymbolicClassificationSingleObjectiveOverfittingAnalyzer(this, cloner);
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[4271] | 74 | }
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| 75 |
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[5747] | 76 | public override IOperation Apply() {
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[5197] | 77 | double[] trainingQuality = QualityParameter.ActualValue.Select(x => x.Value).ToArray();
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[6728] | 78 | var problemData = ProblemDataParameter.ActualValue;
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| 79 | var evaluator = EvaluatorParameter.ActualValue;
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[5747] | 80 | // evaluate on validation partition
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[5882] | 81 | IEnumerable<int> rows = GenerateRowsToEvaluate();
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[5907] | 82 | if (!rows.Any()) return base.Apply();
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[6728] | 83 | IExecutionContext childContext = (IExecutionContext)ExecutionContext.CreateChildOperation(evaluator);
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| 84 | double[] validationQuality = SymbolicExpressionTree
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| 85 | .Select(t => evaluator.Evaluate(childContext, t, problemData, rows))
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| 86 | .ToArray();
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[5823] | 87 | double r = 0.0;
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| 88 | try {
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| 89 | r = alglib.spearmancorr2(trainingQuality, validationQuality);
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| 90 | }
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| 91 | catch (alglib.alglibexception) {
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| 92 | r = 0.0;
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| 93 | }
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[4271] | 94 |
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[5192] | 95 | TrainingValidationQualityCorrelationParameter.ActualValue = new DoubleValue(r);
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| 96 | if (TrainingValidationQualityCorrelationTableParameter.ActualValue == null) {
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[5747] | 97 | var dataTable = new DataTable(TrainingValidationQualityCorrelationTableParameter.Name, TrainingValidationQualityCorrelationTableParameter.Description);
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| 98 | dataTable.Rows.Add(new DataRow(TrainingValidationQualityCorrelationParameter.Name, TrainingValidationQualityCorrelationParameter.Description));
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[5858] | 99 | dataTable.Rows[TrainingValidationQualityCorrelationParameter.Name].VisualProperties.StartIndexZero = true;
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[5192] | 100 | TrainingValidationQualityCorrelationTableParameter.ActualValue = dataTable;
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[5747] | 101 | ResultCollectionParameter.ActualValue.Add(new Result(TrainingValidationQualityCorrelationTableParameter.Name, dataTable));
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[4272] | 102 | }
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| 103 |
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[5747] | 104 | TrainingValidationQualityCorrelationTableParameter.ActualValue.Rows[TrainingValidationQualityCorrelationParameter.Name].Values.Add(r);
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[4272] | 105 |
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[5192] | 106 | if (OverfittingParameter.ActualValue != null && OverfittingParameter.ActualValue.Value) {
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[5436] | 107 | // overfitting == true
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| 108 | // => r must reach the upper threshold to switch back to non-overfitting state
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| 109 | OverfittingParameter.ActualValue = new BoolValue(r < UpperCorrelationThresholdParameter.ActualValue.Value);
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[5192] | 110 | } else {
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[5436] | 111 | // overfitting == false
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| 112 | // => r must drop below lower threshold to switch to overfitting state
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| 113 | OverfittingParameter.ActualValue = new BoolValue(r < LowerCorrelationThresholdParameter.ActualValue.Value);
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[5010] | 114 | }
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[5747] | 115 |
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| 116 | return base.Apply();
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[4271] | 117 | }
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| 118 | }
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| 119 | }
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