[5624] | 1 | #region License Information
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| 2 | /* HeuristicLab
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[16453] | 3 | * Copyright (C) 2002-2019 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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[5624] | 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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[8664] | 22 | using System;
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[13921] | 23 | using System.Collections.Generic;
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[5914] | 24 | using System.Drawing;
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[13921] | 25 | using System.Linq;
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[5624] | 26 | using HeuristicLab.Common;
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| 27 | using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
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[16559] | 28 | using HEAL.Attic;
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[5624] | 29 |
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| 30 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic {
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| 31 | /// <summary>
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[5717] | 32 | /// Abstract base class for symbolic data analysis models
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[5624] | 33 | /// </summary>
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[16462] | 34 | [StorableType("EE72299A-7F04-40DA-994E-F12EF9B12CE7")]
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[16243] | 35 | public abstract class SymbolicDataAnalysisModel : DataAnalysisModel, ISymbolicDataAnalysisModel {
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[7201] | 36 | public static new Image StaticItemImage {
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[5649] | 37 | get { return HeuristicLab.Common.Resources.VSImageLibrary.Function; }
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| 38 | }
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| 39 |
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[5624] | 40 | #region properties
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[9587] | 41 | [Storable]
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| 42 | private double lowerEstimationLimit;
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| 43 | public double LowerEstimationLimit { get { return lowerEstimationLimit; } }
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| 44 | [Storable]
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| 45 | private double upperEstimationLimit;
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| 46 | public double UpperEstimationLimit { get { return upperEstimationLimit; } }
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[5624] | 47 |
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| 48 | [Storable]
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| 49 | private ISymbolicExpressionTree symbolicExpressionTree;
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| 50 | public ISymbolicExpressionTree SymbolicExpressionTree {
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| 51 | get { return symbolicExpressionTree; }
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| 52 | }
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| 53 |
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| 54 | [Storable]
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| 55 | private ISymbolicDataAnalysisExpressionTreeInterpreter interpreter;
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| 56 | public ISymbolicDataAnalysisExpressionTreeInterpreter Interpreter {
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| 57 | get { return interpreter; }
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| 58 | }
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[13921] | 59 |
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[16243] | 60 | public override IEnumerable<string> VariablesUsedForPrediction {
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[13921] | 61 | get {
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[13941] | 62 | var variables =
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[13921] | 63 | SymbolicExpressionTree.IterateNodesPrefix()
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[14826] | 64 | .OfType<IVariableTreeNode>()
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[13921] | 65 | .Select(x => x.VariableName)
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[13941] | 66 | .Distinct();
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| 67 |
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[14826] | 68 | return variables.OrderBy(x => x);
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[13921] | 69 | }
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| 70 | }
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| 71 |
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[5624] | 72 | #endregion
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| 73 |
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| 74 | [StorableConstructor]
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[16462] | 75 | protected SymbolicDataAnalysisModel(StorableConstructorFlag _) : base(_) { }
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[5624] | 76 | protected SymbolicDataAnalysisModel(SymbolicDataAnalysisModel original, Cloner cloner)
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| 77 | : base(original, cloner) {
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| 78 | this.symbolicExpressionTree = cloner.Clone(original.symbolicExpressionTree);
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| 79 | this.interpreter = cloner.Clone(original.interpreter);
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[9587] | 80 | this.lowerEstimationLimit = original.lowerEstimationLimit;
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| 81 | this.upperEstimationLimit = original.upperEstimationLimit;
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[5624] | 82 | }
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[9587] | 83 | protected SymbolicDataAnalysisModel(ISymbolicExpressionTree tree, ISymbolicDataAnalysisExpressionTreeInterpreter interpreter,
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| 84 | double lowerEstimationLimit, double upperEstimationLimit)
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[5624] | 85 | : base() {
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[5649] | 86 | this.name = ItemName;
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| 87 | this.description = ItemDescription;
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[5624] | 88 | this.symbolicExpressionTree = tree;
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| 89 | this.interpreter = interpreter;
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[9587] | 90 | this.lowerEstimationLimit = lowerEstimationLimit;
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| 91 | this.upperEstimationLimit = upperEstimationLimit;
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[5624] | 92 | }
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[8664] | 93 |
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| 94 | #region Scaling
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[8972] | 95 | protected void Scale(IDataAnalysisProblemData problemData, string targetVariable) {
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[8664] | 96 | var dataset = problemData.Dataset;
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| 97 | var rows = problemData.TrainingIndices;
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[8972] | 98 | var estimatedValues = Interpreter.GetSymbolicExpressionTreeValues(SymbolicExpressionTree, dataset, rows);
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[8664] | 99 | var targetValues = dataset.GetDoubleValues(targetVariable, rows);
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| 100 |
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| 101 | var linearScalingCalculator = new OnlineLinearScalingParameterCalculator();
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| 102 | var targetValuesEnumerator = targetValues.GetEnumerator();
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| 103 | var estimatedValuesEnumerator = estimatedValues.GetEnumerator();
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| 104 | while (targetValuesEnumerator.MoveNext() & estimatedValuesEnumerator.MoveNext()) {
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| 105 | double target = targetValuesEnumerator.Current;
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| 106 | double estimated = estimatedValuesEnumerator.Current;
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| 107 | if (!double.IsNaN(estimated) && !double.IsInfinity(estimated))
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| 108 | linearScalingCalculator.Add(estimated, target);
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| 109 | }
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| 110 | if (linearScalingCalculator.ErrorState == OnlineCalculatorError.None && (targetValuesEnumerator.MoveNext() || estimatedValuesEnumerator.MoveNext()))
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| 111 | throw new ArgumentException("Number of elements in target and estimated values enumeration do not match.");
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| 112 |
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| 113 | double alpha = linearScalingCalculator.Alpha;
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| 114 | double beta = linearScalingCalculator.Beta;
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| 115 | if (linearScalingCalculator.ErrorState != OnlineCalculatorError.None) return;
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| 116 |
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| 117 | ConstantTreeNode alphaTreeNode = null;
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| 118 | ConstantTreeNode betaTreeNode = null;
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[16290] | 119 | // check if model has a structure that can be re-used for scaling
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[8972] | 120 | var startNode = SymbolicExpressionTree.Root.GetSubtree(0);
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[16290] | 121 | var addNode = startNode.GetSubtree(0);
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| 122 | if (addNode.Symbol is Addition && addNode.SubtreeCount == 2) {
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| 123 | alphaTreeNode = (ConstantTreeNode)addNode.Subtrees.LastOrDefault(n => n is ConstantTreeNode);
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| 124 | var mulNode = addNode.Subtrees.FirstOrDefault(n => n.Symbol is Multiplication);
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| 125 | if (mulNode != null) {
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| 126 | betaTreeNode = (ConstantTreeNode)mulNode.Subtrees.LastOrDefault(n => n is ConstantTreeNode);
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[8664] | 127 | }
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| 128 | }
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| 129 | // if tree structure matches the structure necessary for linear scaling then reuse the existing tree nodes
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| 130 | if (alphaTreeNode != null && betaTreeNode != null) {
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| 131 | betaTreeNode.Value *= beta;
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| 132 | alphaTreeNode.Value *= beta;
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| 133 | alphaTreeNode.Value += alpha;
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| 134 | } else {
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| 135 | var mainBranch = startNode.GetSubtree(0);
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| 136 | startNode.RemoveSubtree(0);
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| 137 | var scaledMainBranch = MakeSum(MakeProduct(mainBranch, beta), alpha);
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| 138 | startNode.AddSubtree(scaledMainBranch);
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| 139 | }
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| 140 | }
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| 141 |
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| 142 | private static ISymbolicExpressionTreeNode MakeSum(ISymbolicExpressionTreeNode treeNode, double alpha) {
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| 143 | if (alpha.IsAlmost(0.0)) {
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| 144 | return treeNode;
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| 145 | } else {
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| 146 | var addition = new Addition();
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| 147 | var node = addition.CreateTreeNode();
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| 148 | var alphaConst = MakeConstant(alpha);
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| 149 | node.AddSubtree(treeNode);
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| 150 | node.AddSubtree(alphaConst);
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| 151 | return node;
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| 152 | }
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| 153 | }
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| 154 |
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| 155 | private static ISymbolicExpressionTreeNode MakeProduct(ISymbolicExpressionTreeNode treeNode, double beta) {
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| 156 | if (beta.IsAlmost(1.0)) {
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| 157 | return treeNode;
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| 158 | } else {
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| 159 | var multipliciation = new Multiplication();
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| 160 | var node = multipliciation.CreateTreeNode();
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| 161 | var betaConst = MakeConstant(beta);
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| 162 | node.AddSubtree(treeNode);
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| 163 | node.AddSubtree(betaConst);
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| 164 | return node;
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| 165 | }
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| 166 | }
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| 167 |
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| 168 | private static ISymbolicExpressionTreeNode MakeConstant(double c) {
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| 169 | var node = (ConstantTreeNode)(new Constant()).CreateTreeNode();
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| 170 | node.Value = c;
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| 171 | return node;
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| 172 | }
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| 173 | #endregion
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[13921] | 174 |
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[5624] | 175 | }
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| 176 | }
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