1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2019 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System.Linq;
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23 | using HeuristicLab.Common;
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24 | using HeuristicLab.Core;
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25 | using HeuristicLab.Optimization;
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26 | using HeuristicLab.Parameters;
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27 | using HEAL.Fossil;
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28 |
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29 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic.Regression {
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30 | [Item("Symbolic Regression Problem (single-objective)", "Represents a single objective symbolic regression problem.")]
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31 | [StorableType("7DDCF683-96FC-4F70-BF4F-FE3A0B0DE6E0")]
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32 | [Creatable(CreatableAttribute.Categories.GeneticProgrammingProblems, Priority = 100)]
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33 | public class SymbolicRegressionSingleObjectiveProblem : SymbolicDataAnalysisSingleObjectiveProblem<IRegressionProblemData, ISymbolicRegressionSingleObjectiveEvaluator, ISymbolicDataAnalysisSolutionCreator>, IRegressionProblem {
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34 | private const double PunishmentFactor = 10;
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35 | private const int InitialMaximumTreeDepth = 8;
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36 | private const int InitialMaximumTreeLength = 25;
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37 | private const string EstimationLimitsParameterName = "EstimationLimits";
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38 | private const string EstimationLimitsParameterDescription = "The limits for the estimated value that can be returned by the symbolic regression model.";
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39 |
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40 | #region parameter properties
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41 | public IFixedValueParameter<DoubleLimit> EstimationLimitsParameter {
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42 | get { return (IFixedValueParameter<DoubleLimit>)Parameters[EstimationLimitsParameterName]; }
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43 | }
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44 | #endregion
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45 | #region properties
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46 | public DoubleLimit EstimationLimits {
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47 | get { return EstimationLimitsParameter.Value; }
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48 | }
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49 | #endregion
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50 | [StorableConstructor]
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51 | protected SymbolicRegressionSingleObjectiveProblem(StorableConstructorFlag _) : base(_) { }
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52 | protected SymbolicRegressionSingleObjectiveProblem(SymbolicRegressionSingleObjectiveProblem original, Cloner cloner)
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53 | : base(original, cloner) {
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54 | RegisterEventHandlers();
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55 | }
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56 | public override IDeepCloneable Clone(Cloner cloner) { return new SymbolicRegressionSingleObjectiveProblem(this, cloner); }
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57 |
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58 | public SymbolicRegressionSingleObjectiveProblem()
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59 | : base(new RegressionProblemData(), new SymbolicRegressionSingleObjectivePearsonRSquaredEvaluator(), new SymbolicDataAnalysisExpressionTreeCreator()) {
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60 | Parameters.Add(new FixedValueParameter<DoubleLimit>(EstimationLimitsParameterName, EstimationLimitsParameterDescription));
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61 |
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62 | EstimationLimitsParameter.Hidden = true;
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63 |
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64 |
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65 | ApplyLinearScalingParameter.Value.Value = true;
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66 | Maximization.Value = true;
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67 | MaximumSymbolicExpressionTreeDepth.Value = InitialMaximumTreeDepth;
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68 | MaximumSymbolicExpressionTreeLength.Value = InitialMaximumTreeLength;
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69 |
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70 | RegisterEventHandlers();
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71 | ConfigureGrammarSymbols();
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72 | InitializeOperators();
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73 | UpdateEstimationLimits();
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74 | }
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75 |
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76 | [StorableHook(HookType.AfterDeserialization)]
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77 | private void AfterDeserialization() {
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78 | RegisterEventHandlers();
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79 | // compatibility
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80 | bool changed = false;
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81 | if (!Operators.OfType<SymbolicRegressionSingleObjectiveTrainingParetoBestSolutionAnalyzer>().Any()) {
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82 | Operators.Add(new SymbolicRegressionSingleObjectiveTrainingParetoBestSolutionAnalyzer());
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83 | changed = true;
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84 | }
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85 | if (!Operators.OfType<SymbolicRegressionSingleObjectiveValidationParetoBestSolutionAnalyzer>().Any()) {
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86 | Operators.Add(new SymbolicRegressionSingleObjectiveValidationParetoBestSolutionAnalyzer());
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87 | changed = true;
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88 | }
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89 | if (!Operators.OfType<SymbolicRegressionSolutionsAnalyzer>().Any()) {
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90 | Operators.Add(new SymbolicRegressionSolutionsAnalyzer());
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91 | changed = true;
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92 | }
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93 | if (changed) {
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94 | ParameterizeOperators();
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95 | }
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96 | }
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97 |
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98 | private void RegisterEventHandlers() {
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99 | SymbolicExpressionTreeGrammarParameter.ValueChanged += (o, e) => ConfigureGrammarSymbols();
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100 | }
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101 |
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102 | private void ConfigureGrammarSymbols() {
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103 | var grammar = SymbolicExpressionTreeGrammar as TypeCoherentExpressionGrammar;
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104 | if (grammar != null) grammar.ConfigureAsDefaultRegressionGrammar();
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105 | }
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106 |
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107 | private void InitializeOperators() {
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108 | Operators.Add(new SymbolicRegressionSingleObjectiveTrainingBestSolutionAnalyzer());
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109 | Operators.Add(new SymbolicRegressionSingleObjectiveValidationBestSolutionAnalyzer());
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110 | Operators.Add(new SymbolicRegressionSingleObjectiveOverfittingAnalyzer());
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111 | Operators.Add(new SymbolicRegressionSingleObjectiveTrainingParetoBestSolutionAnalyzer());
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112 | Operators.Add(new SymbolicRegressionSingleObjectiveValidationParetoBestSolutionAnalyzer());
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113 | Operators.Add(new SymbolicRegressionSolutionsAnalyzer());
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114 | Operators.Add(new SymbolicExpressionTreePhenotypicSimilarityCalculator());
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115 | Operators.Add(new SymbolicRegressionPhenotypicDiversityAnalyzer(Operators.OfType<SymbolicExpressionTreePhenotypicSimilarityCalculator>()) { DiversityResultName = "Phenotypic Diversity" });
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116 | ParameterizeOperators();
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117 | }
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118 |
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119 | private void UpdateEstimationLimits() {
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120 | if (ProblemData.TrainingIndices.Any()) {
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121 | var targetValues = ProblemData.Dataset.GetDoubleValues(ProblemData.TargetVariable, ProblemData.TrainingIndices).ToList();
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122 | var mean = targetValues.Average();
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123 | var range = targetValues.Max() - targetValues.Min();
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124 | EstimationLimits.Upper = mean + PunishmentFactor * range;
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125 | EstimationLimits.Lower = mean - PunishmentFactor * range;
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126 | } else {
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127 | EstimationLimits.Upper = double.MaxValue;
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128 | EstimationLimits.Lower = double.MinValue;
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129 | }
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130 | }
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131 |
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132 | protected override void OnProblemDataChanged() {
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133 | base.OnProblemDataChanged();
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134 | UpdateEstimationLimits();
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135 | }
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136 |
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137 | protected override void ParameterizeOperators() {
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138 | base.ParameterizeOperators();
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139 | if (Parameters.ContainsKey(EstimationLimitsParameterName)) {
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140 | var operators = Parameters.OfType<IValueParameter>().Select(p => p.Value).OfType<IOperator>().Union(Operators);
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141 | foreach (var op in operators.OfType<ISymbolicDataAnalysisBoundedOperator>()) {
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142 | op.EstimationLimitsParameter.ActualName = EstimationLimitsParameter.Name;
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143 | }
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144 | }
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145 |
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146 | foreach (var op in Operators.OfType<ISolutionSimilarityCalculator>()) {
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147 | op.SolutionVariableName = SolutionCreator.SymbolicExpressionTreeParameter.ActualName;
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148 | op.QualityVariableName = Evaluator.QualityParameter.ActualName;
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149 |
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150 | if (op is SymbolicExpressionTreePhenotypicSimilarityCalculator) {
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151 | var phenotypicSimilarityCalculator = (SymbolicExpressionTreePhenotypicSimilarityCalculator)op;
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152 | phenotypicSimilarityCalculator.ProblemData = ProblemData;
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153 | phenotypicSimilarityCalculator.Interpreter = SymbolicExpressionTreeInterpreter;
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154 | }
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155 | }
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156 | }
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157 | }
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158 | }
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