1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2018 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System;
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23 | using HeuristicLab.Common;
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24 | using HeuristicLab.Core;
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25 | using HeuristicLab.Data;
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26 | using HeuristicLab.Parameters;
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27 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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28 |
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29 | namespace HeuristicLab.Algorithms.DataAnalysis {
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30 | [StorableClass]
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31 | // conditionally positive definite. (need to add polynomials) see http://num.math.uni-goettingen.de/schaback/teaching/sc.pdf
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32 | [Item("ThinPlatePolysplineKernel", "A kernel function that uses the ThinPlatePolyspline function (||x-c||/Beta)^(Degree)*log(||x-c||/Beta) as described in \"Thin-Plate Spline Radial Basis Function Scheme for Advection-Diffusion Problems\" with beta as a scaling parameter.")]
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33 | public class ThinPlatePolysplineKernel : KernelBase {
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34 |
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35 | private const string DegreeParameterName = "Degree";
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36 |
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37 | public IFixedValueParameter<DoubleValue> DegreeParameter {
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38 | get { return (IFixedValueParameter<DoubleValue>)Parameters[DegreeParameterName]; }
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39 | }
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40 | public DoubleValue Degree {
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41 | get { return DegreeParameter.Value; }
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42 | }
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43 |
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44 | [StorableConstructor]
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45 | protected ThinPlatePolysplineKernel(bool deserializing) : base(deserializing) { }
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46 |
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47 | protected ThinPlatePolysplineKernel(ThinPlatePolysplineKernel original, Cloner cloner) : base(original, cloner) { }
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48 |
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49 | public ThinPlatePolysplineKernel() {
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50 | Parameters.Add(new FixedValueParameter<DoubleValue>(DegreeParameterName, "The degree of the kernel. Needs to be greater than zero.", new DoubleValue(2.0)));
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51 | }
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52 |
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53 | public override IDeepCloneable Clone(Cloner cloner) {
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54 | return new ThinPlatePolysplineKernel(this, cloner);
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55 | }
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56 |
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57 | protected override double Get(double norm) {
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58 | if (Beta == null) throw new InvalidOperationException("Can not calculate kernel distance while Beta is null");
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59 | var beta = Beta.Value;
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60 | if (Math.Abs(beta) < double.Epsilon) return double.NaN;
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61 | var d = norm / beta;
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62 | if (Math.Abs(d) < double.Epsilon) return 0;
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63 | return Math.Pow(d, Degree.Value) * Math.Log(d);
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64 | }
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65 |
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66 | // (Degree/beta) * (norm/beta)^Degree * log(norm/beta)
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67 | protected override double GetGradient(double norm) {
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68 | if (Beta == null) throw new InvalidOperationException("Can not calculate kernel distance gradient while Beta is null");
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69 | var beta = Beta.Value;
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70 | if (Math.Abs(beta) < double.Epsilon) return double.NaN;
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71 | var d = norm / beta;
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72 | if (Math.Abs(d) < double.Epsilon) return 0;
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73 | return Degree.Value / beta * Math.Pow(d, Degree.Value) * Math.Log(d);
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74 | }
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75 | }
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76 | }
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