[3294] | 1 | #region License Information
|
---|
| 2 | /* HeuristicLab
|
---|
[17434] | 3 | * Copyright (C) Heuristic and Evolutionary Algorithms Laboratory (HEAL)
|
---|
[3294] | 4 | *
|
---|
| 5 | * This file is part of HeuristicLab.
|
---|
| 6 | *
|
---|
| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
|
---|
| 8 | * it under the terms of the GNU General Public License as published by
|
---|
| 9 | * the Free Software Foundation, either version 3 of the License, or
|
---|
| 10 | * (at your option) any later version.
|
---|
| 11 | *
|
---|
| 12 | * HeuristicLab is distributed in the hope that it will be useful,
|
---|
| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
|
---|
| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
---|
| 15 | * GNU General Public License for more details.
|
---|
| 16 | *
|
---|
| 17 | * You should have received a copy of the GNU General Public License
|
---|
| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
|
---|
| 19 | */
|
---|
| 20 | #endregion
|
---|
| 21 |
|
---|
| 22 | using System;
|
---|
[4068] | 23 | using System.Collections.Generic;
|
---|
[3294] | 24 | using System.Linq;
|
---|
[4068] | 25 | using System.Text;
|
---|
[4722] | 26 | using HeuristicLab.Common;
|
---|
[3294] | 27 | using HeuristicLab.Core;
|
---|
| 28 | using HeuristicLab.Data;
|
---|
[17434] | 29 | using HEAL.Attic;
|
---|
[12891] | 30 | using HeuristicLab.Random;
|
---|
[3294] | 31 |
|
---|
[5499] | 32 | namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
|
---|
[3294] | 33 | /// <summary>
|
---|
| 34 | /// Manipulates a symbolic expression by duplicating a preexisting function-defining branch.
|
---|
| 35 | /// As described in Koza, Bennett, Andre, Keane, Genetic Programming III - Darwinian Invention and Problem Solving, 1999, pp. 88
|
---|
| 36 | /// </summary>
|
---|
[5510] | 37 | [Item("SubroutineDuplicater", "Manipulates a symbolic expression by duplicating a preexisting function-defining branch. As described in Koza, Bennett, Andre, Keane, Genetic Programming III - Darwinian Invention and Problem Solving, 1999, pp. 88")]
|
---|
[17434] | 38 | [StorableType("FA58A28B-95B5-43BF-B94A-99FBFF4C9316")]
|
---|
[3534] | 39 | public sealed class SubroutineDuplicater : SymbolicExpressionTreeArchitectureManipulator {
|
---|
[4722] | 40 | [StorableConstructor]
|
---|
[17434] | 41 | private SubroutineDuplicater(StorableConstructorFlag _) : base(_) { }
|
---|
[4722] | 42 | private SubroutineDuplicater(SubroutineDuplicater original, Cloner cloner)
|
---|
| 43 | : base(original, cloner) {
|
---|
| 44 | }
|
---|
| 45 | public SubroutineDuplicater() : base() { }
|
---|
| 46 |
|
---|
| 47 | public override IDeepCloneable Clone(Cloner cloner) {
|
---|
| 48 | return new SubroutineDuplicater(this, cloner);
|
---|
| 49 | }
|
---|
| 50 |
|
---|
[3294] | 51 | public override sealed void ModifyArchitecture(
|
---|
| 52 | IRandom random,
|
---|
[5510] | 53 | ISymbolicExpressionTree symbolicExpressionTree,
|
---|
| 54 | IntValue maxFunctionDefinitions, IntValue maxFunctionArguments) {
|
---|
| 55 | DuplicateSubroutine(random, symbolicExpressionTree, maxFunctionDefinitions.Value, maxFunctionArguments.Value);
|
---|
[3294] | 56 | }
|
---|
| 57 |
|
---|
[3360] | 58 | public static bool DuplicateSubroutine(
|
---|
[3294] | 59 | IRandom random,
|
---|
[5510] | 60 | ISymbolicExpressionTree symbolicExpressionTree,
|
---|
| 61 | int maxFunctionDefinitions, int maxFunctionArguments) {
|
---|
[12891] | 62 | var functionDefiningBranches = symbolicExpressionTree.IterateNodesPrefix().OfType<DefunTreeNode>().ToList();
|
---|
| 63 | if (!functionDefiningBranches.Any() || functionDefiningBranches.Count() == maxFunctionDefinitions)
|
---|
[3722] | 64 | // no function defining branches to duplicate or already reached the max number of ADFs
|
---|
| 65 | return false;
|
---|
[3294] | 66 |
|
---|
[5510] | 67 | string formatString = new StringBuilder().Append('0', (int)Math.Log10(maxFunctionDefinitions) + 1).ToString(); // >= 100 functions => ###
|
---|
| 68 | var allowedFunctionNames = from index in Enumerable.Range(0, maxFunctionDefinitions)
|
---|
[3294] | 69 | select "ADF" + index.ToString(formatString);
|
---|
[12891] | 70 |
|
---|
| 71 | var selectedBranch = functionDefiningBranches.SampleRandom(random);
|
---|
[3360] | 72 | var duplicatedDefunBranch = (DefunTreeNode)selectedBranch.Clone();
|
---|
| 73 | string newFunctionName = allowedFunctionNames.Except(UsedFunctionNames(symbolicExpressionTree)).First();
|
---|
| 74 | duplicatedDefunBranch.FunctionName = newFunctionName;
|
---|
[5733] | 75 | symbolicExpressionTree.Root.AddSubtree(duplicatedDefunBranch);
|
---|
[5510] | 76 | duplicatedDefunBranch.SetGrammar((ISymbolicExpressionTreeGrammar)selectedBranch.Grammar.Clone());
|
---|
[8148] | 77 |
|
---|
| 78 | var allowedChildSymbols = selectedBranch.Grammar.GetAllowedChildSymbols(selectedBranch.Symbol);
|
---|
| 79 | foreach (var allowedChildSymbol in allowedChildSymbols)
|
---|
| 80 | duplicatedDefunBranch.Grammar.AddAllowedChildSymbol(duplicatedDefunBranch.Symbol, allowedChildSymbol);
|
---|
| 81 | var maxSubtrees = selectedBranch.Grammar.GetMaximumSubtreeCount(selectedBranch.Symbol);
|
---|
| 82 | for (int i = 0; i < maxSubtrees; i++) {
|
---|
| 83 | foreach (var allowedChildSymbol in selectedBranch.Grammar.GetAllowedChildSymbols(selectedBranch.Symbol, i))
|
---|
| 84 | duplicatedDefunBranch.Grammar.AddAllowedChildSymbol(duplicatedDefunBranch.Symbol, allowedChildSymbol);
|
---|
| 85 | }
|
---|
| 86 |
|
---|
[3360] | 87 | // add an invoke symbol for each branch that is allowed to invoke the original function
|
---|
[5733] | 88 | foreach (var subtree in symbolicExpressionTree.Root.Subtrees.OfType<SymbolicExpressionTreeTopLevelNode>()) {
|
---|
[3360] | 89 | var matchingInvokeSymbol = (from symb in subtree.Grammar.Symbols.OfType<InvokeFunction>()
|
---|
| 90 | where symb.FunctionName == selectedBranch.FunctionName
|
---|
| 91 | select symb).SingleOrDefault();
|
---|
| 92 | if (matchingInvokeSymbol != null) {
|
---|
[5686] | 93 | var invokeSymbol = new InvokeFunction(duplicatedDefunBranch.FunctionName);
|
---|
| 94 | subtree.Grammar.AddSymbol(invokeSymbol);
|
---|
| 95 | subtree.Grammar.SetSubtreeCount(invokeSymbol, duplicatedDefunBranch.NumberOfArguments, duplicatedDefunBranch.NumberOfArguments);
|
---|
| 96 |
|
---|
[6233] | 97 | foreach (ISymbol symbol in subtree.Grammar.Symbols) {
|
---|
[5686] | 98 | if (subtree.Grammar.IsAllowedChildSymbol(symbol, matchingInvokeSymbol))
|
---|
| 99 | subtree.Grammar.AddAllowedChildSymbol(symbol, invokeSymbol);
|
---|
| 100 | else {
|
---|
| 101 | for (int i = 0; i < subtree.Grammar.GetMaximumSubtreeCount(symbol); i++)
|
---|
| 102 | if (subtree.Grammar.IsAllowedChildSymbol(symbol, matchingInvokeSymbol, i))
|
---|
[5792] | 103 | subtree.Grammar.AddAllowedChildSymbol(symbol, invokeSymbol, i);
|
---|
[5686] | 104 | }
|
---|
| 105 | }
|
---|
| 106 |
|
---|
[6233] | 107 | foreach (ISymbol symbol in subtree.Grammar.GetAllowedChildSymbols(matchingInvokeSymbol))
|
---|
[5686] | 108 | if (symbol != invokeSymbol) //avoid duplicate entry invokesymbol / invokesymbol
|
---|
| 109 | subtree.Grammar.AddAllowedChildSymbol(invokeSymbol, symbol);
|
---|
| 110 | for (int i = 0; i < subtree.Grammar.GetMaximumSubtreeCount(matchingInvokeSymbol); i++) {
|
---|
[6233] | 111 | foreach (ISymbol symbol in subtree.Grammar.GetAllowedChildSymbols(matchingInvokeSymbol, i).Except(subtree.Grammar.GetAllowedChildSymbols(matchingInvokeSymbol)))
|
---|
[5686] | 112 | subtree.Grammar.AddAllowedChildSymbol(invokeSymbol, symbol, i);
|
---|
| 113 | }
|
---|
[3294] | 114 | }
|
---|
[3369] | 115 | // in the current subtree:
|
---|
| 116 | // for all invoke nodes of the original function replace the invoke of the original function with an invoke of the new function randomly
|
---|
| 117 | var originalFunctionInvocations = from node in subtree.IterateNodesPrefix().OfType<InvokeFunctionTreeNode>()
|
---|
| 118 | where node.Symbol.FunctionName == selectedBranch.FunctionName
|
---|
| 119 | select node;
|
---|
| 120 | foreach (var originalFunctionInvokeNode in originalFunctionInvocations) {
|
---|
| 121 | var newInvokeSymbol = (from symb in subtree.Grammar.Symbols.OfType<InvokeFunction>()
|
---|
| 122 | where symb.FunctionName == duplicatedDefunBranch.FunctionName
|
---|
| 123 | select symb).Single();
|
---|
| 124 | // flip coin wether to replace with newly defined function
|
---|
| 125 | if (random.NextDouble() < 0.5) {
|
---|
| 126 | originalFunctionInvokeNode.Symbol = newInvokeSymbol;
|
---|
| 127 | }
|
---|
[3360] | 128 | }
|
---|
| 129 | }
|
---|
[3294] | 130 | return true;
|
---|
| 131 | }
|
---|
| 132 |
|
---|
[5510] | 133 | private static IEnumerable<string> UsedFunctionNames(ISymbolicExpressionTree symbolicExpressionTree) {
|
---|
[3294] | 134 | return from node in symbolicExpressionTree.IterateNodesPrefix()
|
---|
| 135 | where node.Symbol is Defun
|
---|
[3360] | 136 | select ((DefunTreeNode)node).FunctionName;
|
---|
[3294] | 137 | }
|
---|
| 138 | }
|
---|
| 139 | }
|
---|