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source: branches/SymbolicExpressionTreeDiversityAnalyzers/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/TreeMatching/SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator.cs @ 12028

Last change on this file since 12028 was 12028, checked in by bburlacu, 9 years ago

#2326: Branched HeuristicLab.Problems.DataAnalysis.Symbolic, initial commit.

File size: 4.4 KB
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1#region License Information
2/* HeuristicLab
3 * Copyright (C) 2002-2015 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
4 *
5 * This file is part of HeuristicLab.
6 *
7 * HeuristicLab is free software: you can redistribute it and/or modify
8 * it under the terms of the GNU General Public License as published by
9 * the Free Software Foundation, either version 3 of the License, or
10 * (at your option) any later version.
11 *
12 * HeuristicLab is distributed in the hope that it will be useful,
13 * but WITHOUT ANY WARRANTY; without even the implied warranty of
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
15 * GNU General Public License for more details.
16 *
17 * You should have received a copy of the GNU General Public License
18 * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
19 */
20#endregion
21
22using System;
23using HeuristicLab.Common;
24using HeuristicLab.Core;
25using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
26using HeuristicLab.Optimization.Operators;
27using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
28
29namespace HeuristicLab.Problems.DataAnalysis.Symbolic {
30  [StorableClass]
31  [Item("SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator", "A similarity calculator based on the size of the maximum common subtree between two trees")]
32  public class SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator : SingleObjectiveSolutionSimilarityCalculator {
33    [Storable]
34    private readonly SymbolicExpressionTreeNodeEqualityComparer comparer;
35    public bool MatchVariableWeights {
36      get { return comparer.MatchVariableWeights; }
37      set { comparer.MatchVariableWeights = value; }
38    }
39
40    public bool MatchConstantValues {
41      get { return comparer.MatchConstantValues; }
42      set { comparer.MatchConstantValues = value; }
43    }
44
45    [StorableConstructor]
46    protected SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator(bool deserializing) : base(deserializing) { }
47
48    public override IDeepCloneable Clone(Cloner cloner) {
49      return new SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator(this, cloner);
50    }
51
52    protected SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator(SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator original, Cloner cloner)
53      : base(original, cloner) {
54      comparer = cloner.Clone(original.comparer);
55    }
56
57    public SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator() {
58      comparer = new SymbolicExpressionTreeNodeEqualityComparer {
59        MatchConstantValues = true,
60        MatchVariableNames = true,
61        MatchVariableWeights = true
62      };
63    }
64
65    public SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator(bool matchVariableWeights, bool matchConstantValues) {
66      comparer = new SymbolicExpressionTreeNodeEqualityComparer {
67        MatchConstantValues = matchConstantValues,
68        MatchVariableNames = true,
69        MatchVariableWeights = matchVariableWeights
70      };
71    }
72
73    public double CalculateSimilarity(ISymbolicExpressionTree t1, ISymbolicExpressionTree t2) {
74      return MaxCommonSubtreeSimilarity(t1, t2, comparer);
75    }
76
77    public override double CalculateSolutionSimilarity(IScope leftSolution, IScope rightSolution) {
78      var t1 = leftSolution.Variables[SolutionVariableName].Value as ISymbolicExpressionTree;
79      var t2 = rightSolution.Variables[SolutionVariableName].Value as ISymbolicExpressionTree;
80
81      if (t1 == null || t2 == null)
82        throw new ArgumentException("Cannot calculate similarity when one of the arguments is null.");
83
84      return MaxCommonSubtreeSimilarity(t1, t2, comparer);
85    }
86
87    public static double MaxCommonSubtreeSimilarity(ISymbolicExpressionTree a, ISymbolicExpressionTree b, ISymbolicExpressionTreeNodeSimilarityComparer comparer) {
88      int max = 0;
89      var rootA = a.Root.GetSubtree(0).GetSubtree(0);
90      var rootB = b.Root.GetSubtree(0).GetSubtree(0);
91      foreach (var aa in rootA.IterateNodesBreadth()) {
92        int lenA = aa.GetLength();
93        if (lenA <= max) continue;
94        foreach (var bb in rootB.IterateNodesBreadth()) {
95          int lenB = bb.GetLength();
96          if (lenB <= max) continue;
97          int matches = SymbolicExpressionTreeMatching.Match(aa, bb, comparer);
98          if (max < matches)
99            max = matches;
100        }
101      }
102      return 2.0 * max / (rootA.GetLength() + rootB.GetLength());
103    }
104  }
105}
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