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source: branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Crossovers/SymbolicDataAnalysisExpressionDiversityPreservingCrossover.cs @ 11458

Last change on this file since 11458 was 11458, checked in by bburlacu, 10 years ago

#1772: HeuristicLab.Problems.DataAnalysis.Symbolic:

  • Merged trunk changes (SymbolicExpressionImporter)
  • Added Passthrough symbol (does not perform an operation, just transfers the input), adjusted interpreter and opcodes accordingly
  • Added diversity preserving crossover
  • Replaced IDistanceCalculator interface with ISymbolicDataAnalysisExpressionSimilarityCalculator and adjusted similarity calculators
  • Refactored tracing, moved functionality to the TraceCalculator (when this is complete the old code will be removed)
File size: 5.8 KB
Line 
1#region License Information
2/* HeuristicLab
3 * Copyright (C) 2002-2014 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
4 *
5 * This file is part of HeuristicLab.
6 *
7 * HeuristicLab is free software: you can redistribute it and/or modify
8 * it under the terms of the GNU General Public License as published by
9 * the Free Software Foundation, either version 3 of the License, or
10 * (at your option) any later version.
11 *
12 * HeuristicLab is distributed in the hope that it will be useful,
13 * but WITHOUT ANY WARRANTY; without even the implied warranty of
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
15 * GNU General Public License for more details.
16 *
17 * You should have received a copy of the GNU General Public License
18 * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
19 */
20#endregion
21
22using System.Linq;
23using HeuristicLab.Common;
24using HeuristicLab.Core;
25using HeuristicLab.Data;
26using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
27using HeuristicLab.Parameters;
28using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
29
30namespace HeuristicLab.Problems.DataAnalysis.Symbolic.Crossovers {
31  [Item("SymbolicDataAnalysisExpressionDiversityPreservingCrossover", "A crossover operator which tries to preserve diversity by favoring duplicate nodes as crossover points in the tree")]
32  [StorableClass]
33  public sealed class SymbolicDataAnalysisExpressionDiversityPreservingCrossover<T> : SymbolicDataAnalysisExpressionCrossover<T> where T : class, IDataAnalysisProblemData {
34    private const string SimilarityCalculatorParameterName = "SimilarityCalculator";
35    private const string InternalCrossoverPointProbabilityParameterName = "InternalCrossoverPointProbability";
36
37    #region Parameter Properties
38    public IValueLookupParameter<PercentValue> InternalCrossoverPointProbabilityParameter {
39      get { return (IValueLookupParameter<PercentValue>)Parameters[InternalCrossoverPointProbabilityParameterName]; }
40    }
41    public IValueParameter<ISymbolicDataAnalysisExpressionSimilarityCalculator> SimilarityCalculatorParameter {
42      get { return (IValueParameter<ISymbolicDataAnalysisExpressionSimilarityCalculator>)Parameters[SimilarityCalculatorParameterName]; }
43    }
44    #endregion
45
46    public ISymbolicDataAnalysisExpressionSimilarityCalculator SimilarityCalculator {
47      get { return SimilarityCalculatorParameter.Value; }
48    }
49
50    private SymbolicDataAnalysisExpressionDiversityPreservingCrossover(SymbolicDataAnalysisExpressionDiversityPreservingCrossover<T> original, Cloner cloner)
51      : base(original, cloner) {
52    }
53
54    public SymbolicDataAnalysisExpressionDiversityPreservingCrossover() {
55      Parameters.Add(new ValueLookupParameter<PercentValue>(InternalCrossoverPointProbabilityParameterName, "The probability to select an internal crossover point (instead of a leaf node).", new PercentValue(0.9)));
56      Parameters.Add(new ValueParameter<ISymbolicDataAnalysisExpressionSimilarityCalculator>(SimilarityCalculatorParameterName, "The similarity calculator", new BottomUpSimilarityCalculator()));
57    }
58
59    public override IDeepCloneable Clone(Cloner cloner) {
60      return new SymbolicDataAnalysisExpressionDiversityPreservingCrossover<T>(this, cloner);
61    }
62
63    [StorableConstructor]
64    private SymbolicDataAnalysisExpressionDiversityPreservingCrossover(bool deserializing) : base(deserializing) { }
65
66    public override ISymbolicExpressionTree Crossover(IRandom random, ISymbolicExpressionTree parent0, ISymbolicExpressionTree parent1) {
67      int maximumTreeLength = MaximumSymbolicExpressionTreeLengthParameter.ActualValue.Value;
68      int maximumTreeDepth = MaximumSymbolicExpressionTreeDepthParameter.ActualValue.Value;
69      double internalCrossoverPointProbability = InternalCrossoverPointProbabilityParameter.ActualValue.Value;
70
71      return Cross(random, parent0, parent1, SimilarityCalculator, maximumTreeDepth, maximumTreeLength);
72    }
73
74    public static ISymbolicExpressionTree Cross(IRandom random, ISymbolicExpressionTree parent0, ISymbolicExpressionTree parent1, ISymbolicDataAnalysisExpressionSimilarityCalculator similarityCalculator, int maxDepth, int maxLength) {
75      var actualRoot = parent0.Root.GetSubtree(0).GetSubtree(0);
76      while (actualRoot.SubtreeCount > 0 && actualRoot.SubtreeCount < 2) actualRoot = actualRoot.GetSubtree(0);
77      if (actualRoot.SubtreeCount == 0) return parent0;
78      var left = actualRoot.GetSubtree(0);
79      var right = actualRoot.GetSubtree(1);
80      var bus = (BottomUpSimilarityCalculator)similarityCalculator;
81      var map = bus.ComputeBottomUpMapping(left, right);
82
83      var crossoverPoints = parent0.IterateNodesPostfix().Where(x => x.Parent != null && x.Parent != parent0.Root).Select(x => new CutPoint(x.Parent, x)).ToList();
84      var weights = crossoverPoints.Select(x => map.ContainsKey(x.Child) ? 3D : x.Child.SubtreeCount > 0 ? 2D : 1D);
85
86      var cutpoint = crossoverPoints.SelectRandom(weights, random);
87      int level = parent0.Root.GetBranchLevel(cutpoint.Child);
88      int length = parent0.Root.GetLength() - cutpoint.Child.GetLength();
89
90      var allowedBranches = parent1.IterateNodesPostfix().Where(x => x.Parent != null &&
91                                                                x.Parent != parent1.Root &&
92                                                                x.GetDepth() + level <= maxDepth &&
93                                                                x.GetLength() + length <= maxLength &&
94                                                                cutpoint.IsMatchingPointType(x)).ToList();
95      if (!allowedBranches.Any())
96        return parent0;
97
98      var selectedBranch = allowedBranches.SelectRandom(random);
99
100      // swap the node that would create the best offspring
101      Swap(cutpoint, selectedBranch);
102      return parent0;
103    }
104  }
105}
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