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Opened 6 years ago

Closed 5 years ago

#2948 closed enhancement (done)

Symbolic differentiation

Reported by: gkronber Owned by: gkronber
Priority: medium Milestone: HeuristicLab 3.3.16
Component: Problems.DataAnalysis.Symbolic Version: trunk
Keywords: Cc:

Description

Sometimes it can be helpful to look at derivatives of a model. It is rather straightforward to implement symbolic differentiation using our tree representation of expressions.

Change History (32)

comment:1 Changed 6 years ago by gkronber

  • Owner set to gkronber
  • Status changed from new to accepted
  • Version set to trunk

comment:2 Changed 6 years ago by gkronber

r16206: added first implementation of symbolic differentiation as well as a test case (to be checked manually)

comment:3 Changed 6 years ago by gkronber

r16207: added new unit test class to project (combine with previous commit)

comment:4 Changed 6 years ago by gkronber

r16213: changed unit test cases to assert results of derivative calculations. Fixed bug in deriving sqrt(x)

comment:5 Changed 6 years ago by gkronber

  • Owner changed from gkronber to mkommend
  • Status changed from accepted to reviewing

comment:6 Changed 6 years ago by gkronber

r16216: removed string interpolation

comment:7 follow-ups: Changed 5 years ago by mkommend

  • Owner changed from mkommend to gkronber
  • Status changed from reviewing to assigned

Review Comments

Derivative Calculator

  • Method Derive (line 29) - Although ADFs are virtually never used at least a check that they are not present should be included before accessing tree.Root.GetSubtree(0).GetSubtree(0).
  • Static symbol variables (line 38-42) - Should be static readonly to avoid reassignment.
  • Should a shortcut for deriving f(x1, ... x10) / dy be included ( f'(x1,...,x10)/dy = 0) or is this automatically handled by simplification of a constant expression regardless of its length?
  • Method Derive (line 74) - Is there a specific reason why unary multiplication is not handled?
  • Method Derive (line 90) - Is there a specific reason why divisions with more than 2 arguments are not handled?
  • Method Derive (line 136) - What about the tangent symbol that can be expressed as sin() / cos()?
  • Method IsCompatible (line 172) - This method is never used!

DeriveTest

  • Reviewed unit tests
    • Some of them look overly complicated (due to our simplifier) and I had to use wolfram alpha for verification.

comment:8 Changed 5 years ago by gkronber

r16294: worked on review comments.

comment:9 in reply to: ↑ 7 Changed 5 years ago by gkronber

implemented the following review comments with r16294:

Replying to mkommend:

  • Method Derive (line 29) - Although ADFs are virtually never used at least a check that they are not present should be included before accessing tree.Root.GetSubtree(0).GetSubtree(0).
  • Static symbol variables (line 38-42) - Should be static readonly to avoid reassignment.
  • Method Derive (line 74) - Is there a specific reason why unary multiplication is not handled?
  • Method Derive (line 90) - Is there a specific reason why divisions with more than 2 arguments are not handled?
  • Method Derive (line 136) - What about the tangent symbol that can be expressed as sin() / cos()?

Still open:

  • Should a shortcut for deriving f(x1, ... x10) / dy be included ( f'(x1,...,x10)/dy = 0) or is this automatically handled by simplification of a constant expression regardless of its length?
  • Method IsCompatible (line 172) - This method is never used!

It can be used by classes working with DerivativeCalculator. The pattern is the same for the AutoDiffConverter.

comment:10 Changed 5 years ago by gkronber

r16358: adapted expected results for derivative calculator unit tests because the TreeSimplifier has been changed within ticket #2915.

-> #2915 must be merged to stable together with this ticket

comment:11 in reply to: ↑ 7 Changed 5 years ago by gkronber

Replying to mkommend:

Review Comments

Derivative Calculator

  • Should a shortcut for deriving f(x1, ... x10) / dy be included ( f'(x1,...,x10)/dy = 0) or is this automatically handled by simplification of a constant expression regardless of its length?

Checking whether the variable is used in ISymbolicExpressionTree would necessitate an iteration over all tree nodes. If Derive(ISymbolicExpressionTree tree, string variableName) is called for a variableName which does not occur in the tree the result is automatically a constant zero tree. I added a unit test with r16494 to assert this.

comment:12 Changed 5 years ago by gkronber

  • Owner changed from gkronber to mkommend
  • Status changed from assigned to reviewing

Thanks for the review comments, I have considered all of them. Please review r16294, r16358, and r16494

comment:13 Changed 5 years ago by gkronber

Not supported:

  • Factor variables
  • Abs
  • AQ, Cube, CubeRoot
  • time series symbols
  • Boolean operators and conditionals
  • Power, root (with rounding)
  • all special functions
Version 0, edited 5 years ago by gkronber (next)

comment:14 Changed 5 years ago by gkronber

  • Owner changed from mkommend to gkronber
  • Status changed from reviewing to assigned

comment:15 Changed 5 years ago by gkronber

  • Status changed from assigned to accepted

comment:16 Changed 5 years ago by gkronber

r16543: added support for deriving cube, cuberoot, abs, analytic-quotient

comment:17 Changed 5 years ago by gkronber

  • Owner changed from gkronber to mkommend
  • Status changed from accepted to reviewing

comment:18 Changed 5 years ago by gkronber

  • Owner changed from mkommend to gkronber
  • Status changed from reviewing to assigned

comment:19 Changed 5 years ago by gkronber

r16737: fixed a bug for products with >2 factors

comment:20 Changed 5 years ago by gkronber

  • Owner changed from gkronber to mkommend
  • Status changed from assigned to reviewing

comment:21 Changed 5 years ago by mkommend

  • Owner changed from mkommend to gkronber
  • Status changed from reviewing to readytorelease

Reviewed all changesets of this ticket and the code looks good. However, I haven't tested it.

comment:22 Changed 5 years ago by mkommend

  • Keywords depends-2520 mergewith-(2915 2866 2958 2966) added

comment:23 Changed 5 years ago by mkommend

r17066: Merged 16206, 16207, 16213, 16216, 16294 to stable.

Last edited 5 years ago by mkommend (previous) (diff)

comment:24 Changed 5 years ago by mkommend

  • Keywords merged added; depends-2520 mergewith-(2915 2866 2958 2966) removed

r17102: Merged 16358, 16494, 16543, 16737 into stable.

comment:25 Changed 5 years ago by gkronber

  • Status changed from readytorelease to assigned

Hyperbolic tangent is not supported.

comment:26 Changed 5 years ago by gkronber

  • Status changed from assigned to reviewing

r17125: added support for tanh and a unit test case

comment:27 Changed 5 years ago by gkronber

  • Owner changed from gkronber to mkommend

Please review / release r17125

comment:28 Changed 5 years ago by mkommend

Reviewed r17125.

comment:29 Changed 5 years ago by mkommend

  • Owner changed from mkommend to gkronber
  • Status changed from reviewing to readytorelease

comment:30 Changed 5 years ago by abeham

  • Keywords merged removed

comment:31 Changed 5 years ago by gkronber

  • Keywords merged added

r17155: merged r17125 from trunk to stable

comment:32 Changed 5 years ago by jkarder

  • Keywords merged removed
  • Resolution set to done
  • Status changed from readytorelease to closed
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