# # ChangeLog for trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4 # # Generated by Trac 1.0.12 # 07/20/24 04:34:04 Thu, 23 Aug 2012 15:55:05 GMT abeham [8523] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Nca/NcaAlgorithm.cs (modified) #1913: added classification penalty into fitness function and gradient Thu, 16 Aug 2012 14:48:21 GMT gkronber [8495] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessRegression.cs (modified) #1902 additional change to 8494 Thu, 16 Aug 2012 14:33:50 GMT gkronber [8494] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessRegression.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessRegressionSolutionCreator.cs (modified) #1902 changed mean and covariance function parameters to simple value ... Tue, 14 Aug 2012 15:10:08 GMT gkronber [8491] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovariancePeriodic.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceRQiso.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceSEard.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceSEiso.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/Util.cs (modified) * trunk/sources/HeuristicLab.Tests/HeuristicLab.Algorithms.DataAnalysis-3.4/GaussianProcessFunctionsTest.cs (modified) * trunk/sources/HeuristicLab.Tests/HeuristicLab.Algorithms.DataAnalysis-3.4/GaussianProcessModelTest.cs (modified) #1902 fixed test cases, improved performance Tue, 14 Aug 2012 13:24:30 GMT gkronber [8489] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceProd.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceSEard.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceSum.cs (modified) #1902 removed caches in product and sum covariance functions and ... Tue, 14 Aug 2012 11:25:17 GMT gkronber [8484] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis.Views/3.4/GaussianProcessRegressionSolutionLineChartView.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceConst.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceLinear.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceLinearArd.cs (added) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceNoise.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovariancePeriodic.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceProd.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceRQiso.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceSEard.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceSEiso.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceSum.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessModel.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessRegressionModelCreator.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/ICovarianceFunction.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Interfaces/IGaussianProcessModel.cs (modified) * trunk/sources/HeuristicLab.Tests/HeuristicLab.Algorithms.DataAnalysis-3.4/GaussianProcessFunctionsTest.cs (modified) * trunk/sources/HeuristicLab.Tests/HeuristicLab.Algorithms.DataAnalysis-3.4/GaussianProcessModelTest.cs (modified) #1902 changed interface for covariance functions to improve ... Sat, 11 Aug 2012 12:45:15 GMT gkronber [8475] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis.Views/3.4/GaussianProcessRegressionSolutionLineChartView.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessModel.cs (modified) #1902 fixed bug in calculation of variance in GPR model Fri, 10 Aug 2012 18:42:30 GMT gkronber [8473] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis.Views/3.4/GaussianProcessRegressionSolutionLineChartView.Designer.cs (added) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis.Views/3.4/GaussianProcessRegressionSolutionLineChartView.cs (added) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis.Views/3.4/HeuristicLab.Algorithms.DataAnalysis.Views-3.4.csproj (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis.Views/3.4/Plugin.cs.frame (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceConst.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceNoise.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovariancePeriodic.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceRQiso.cs (added) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceSEard.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceSEiso.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessModel.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessRegressionModelCreator.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessRegressionSolution.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/MeanConst.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/MeanLinear.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/HeuristicLab.Algorithms.DataAnalysis-3.4.csproj (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Interfaces/IGaussianProcessModel.cs (modified) * trunk/sources/HeuristicLab.Algorithms.GradientDescent/3.3/LbfgsInitializer.cs (modified) * trunk/sources/HeuristicLab.Tests/HeuristicLab.Algorithms.DataAnalysis-3.4/GaussianProcessFunctionsTest.cs (modified) * trunk/sources/HeuristicLab.Tests/HeuristicLab.Algorithms.DataAnalysis-3.4/GaussianProcessModelTest.cs (modified) #1902 worked on GPR: added line chart, made parameters of mean and ... Fri, 10 Aug 2012 15:35:12 GMT abeham [8471] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis.Views/3.4/HeuristicLab.Algorithms.DataAnalysis.Views-3.4.csproj (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis.Views/3.4/NcaDimensionReductionView.Designer.cs (copied) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis.Views/3.4/NcaDimensionReductionView.cs (copied) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis.Views/3.4/Plugin.cs.frame (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/HeuristicLab.Algorithms.DataAnalysis-3.4.csproj (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Interfaces/INcaClassificationSolution.cs (copied) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Interfaces/INcaModel.cs (copied) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Nca (added) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Nca/Initialization (added) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Nca/Initialization/INcaInitializer.cs (copied) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Nca/Initialization/LdaInitializer.cs (copied) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Nca/Initialization/PcaInitializer.cs (copied) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Nca/Initialization/RandomInitializer.cs (copied) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Nca/Matrix.cs (copied) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Nca/NcaAlgorithm.cs (copied) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Nca/NcaClassificationSolution.cs (copied) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Nca/NcaModel.cs (copied) #1913: integrated branch into trunk Fri, 10 Aug 2012 13:38:10 GMT abeham [8467] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/NearestNeighbour/NearestNeighbourModel.cs (modified) #1913: fixed name of model Fri, 10 Aug 2012 12:57:21 GMT abeham [8465] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/NearestNeighbour/NearestNeighbourClassification.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/NearestNeighbour/NearestNeighbourModel.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/NearestNeighbour/NearestNeighbourRegression.cs (modified) #1913: Changed k-NN to move model representation (kdTree) into the ... Thu, 09 Aug 2012 15:02:25 GMT gkronber [8464] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceConst.cs (added) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceNoise.cs (added) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/HeuristicLab.Algorithms.DataAnalysis-3.4.csproj (modified) #1902 added const and noise covariance functions. Thu, 09 Aug 2012 14:32:44 GMT gkronber [8463] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis.Views/3.4/HeuristicLab.Algorithms.DataAnalysis.Views-3.4.csproj (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis.Views/3.4/MeanProdView.Designer.cs (added) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis.Views/3.4/MeanProdView.cs (added) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis.Views/3.4/MeanSumView.Designer.cs (added) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis.Views/3.4/MeanSumView.cs (added) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovariancePeriodic.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceProd.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceSEiso.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceSum.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessHyperparameterInitializer.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessModel.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessRegressionSolutionCreator.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/MeanProd.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/Util.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Linear/Scaling.cs (modified) * trunk/sources/HeuristicLab.ExtLibs/HeuristicLab.ALGLIB/3.6.0/ALGLIB-3.6.0 (modified) * trunk/sources/HeuristicLab.ExtLibs/HeuristicLab.ALGLIB/3.6.0/HeuristicLab.ALGLIB-3.6.0 (modified) * trunk/sources/HeuristicLab.Tests/HeuristicLab.Algorithms.DataAnalysis-3.4/GaussianProcessFunctionsTest.cs (modified) * trunk/sources/HeuristicLab.Tests/HeuristicLab.Algorithms.DataAnalysis-3.4/GaussianProcessModelTest.cs (added) * trunk/sources/HeuristicLab.Tests/HeuristicLab.Algorithms.DataAnalysis-3.4/GaussianProcessRegressionTest.cs (moved) * trunk/sources/HeuristicLab.Tests/HeuristicLab.Algorithms.DataAnalysis-3.4/co2.txt (added) * trunk/sources/HeuristicLab.Tests/HeuristicLab.Tests.csproj (modified) #1902 improved GPR implementation Thu, 09 Aug 2012 07:33:23 GMT gkronber [8455] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceLinear.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovariancePeriodic.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceProd.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceSEard.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceSEiso.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceSum.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessModel.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/ICovarianceFunction.cs (modified) * trunk/sources/HeuristicLab.Problems.VehicleRouting.Views/3.4/HeuristicLab.Problems.VehicleRouting.Views-3.4.csproj (modified) * trunk/sources/HeuristicLab.Problems.VehicleRouting/3.4/HeuristicLab.Problems.VehicleRouting-3.4.csproj (modified) * trunk/sources/HeuristicLab.Tests/HeuristicLab.Algorithms.DataAnalysis-3.4/GaussianProcessFunctionsTest.cs (modified) #1902 changed calculation of gradients for covariance functions to ... Wed, 08 Aug 2012 23:31:44 GMT abeham [8452] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Plugin.cs.frame (modified) * trunk/sources/HeuristicLab.Algorithms.GradientDescent/3.3/Plugin.cs.frame (modified) * trunk/sources/HeuristicLab.Analysis/3.3/Plugin.cs.frame (modified) * trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic.Classification/3.4/Plugin.cs.frame (modified) * trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic.Regression/3.4/Plugin.cs.frame (modified) * trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic.Views/3.4/Plugin.cs.frame (modified) * trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Plugin.cs.frame (modified) #1905: Updated plugin dependencies Wed, 08 Aug 2012 21:13:59 GMT abeham [8448] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/HeuristicLab.Algorithms.DataAnalysis-3.4.csproj (modified) * trunk/sources/HeuristicLab.Algorithms.GradientDescent/3.3/HeuristicLab.Algorithms.GradientDescent.csproj (modified) * trunk/sources/HeuristicLab.Analysis/3.3/HeuristicLab.Analysis-3.3.csproj (modified) * trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic.Classification/3.4/HeuristicLab.Problems.DataAnalysis.Symbolic.Classification-3.4.csproj (modified) * trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic.Regression/3.4/HeuristicLab.Problems.DataAnalysis.Symbolic.Regression-3.4.csproj (modified) * trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic.Views/3.4/HeuristicLab.Problems.DataAnalysis.Symbolic.Views-3.4.csproj (modified) * trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/HeuristicLab.Problems.DataAnalysis.Symbolic-3.4.csproj (modified) #1905: Corrected project references to ALGLIB 3.6.0 Wed, 08 Aug 2012 15:52:27 GMT gkronber [8439] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceProd.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/MeanProd.cs (added) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/MeanSum.cs (added) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/HeuristicLab.Algorithms.DataAnalysis-3.4.csproj (modified) * trunk/sources/HeuristicLab.Tests/HeuristicLab.Algorithms.DataAnalysis-3.4 (added) * trunk/sources/HeuristicLab.Tests/HeuristicLab.Algorithms.DataAnalysis-3.4/GaussianProcessFunctionsTest.cs (added) * trunk/sources/HeuristicLab.Tests/HeuristicLab.Tests.csproj (modified) #1902 implemented unit tests for mean and covariance functions. ... Tue, 07 Aug 2012 07:52:14 GMT gkronber [8421] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessRegression.cs (modified) #1902 fixed default mean and covariance function for GP Mon, 06 Aug 2012 16:52:22 GMT gkronber [8419] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessHyperparameterInitializer.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/GaussianProcessRegression.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/HeuristicLab.Algorithms.DataAnalysis-3.4.csproj (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/Plugin.cs.frame (modified) #1902 changed initialization of hyperparameter vector for GPR using a ... Mon, 06 Aug 2012 14:16:28 GMT gkronber [8417] * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovarianceLinear.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/GaussianProcess/CovariancePeriodic.cs (modified) * trunk/sources/HeuristicLab.Algorithms.DataAnalysis/3.4/HeuristicLab.Algorithms.DataAnalysis-3.4.csproj (modified) #1902 added periodic covariance function