# # ChangeLog for branches/HeuristicLab.EvolutionTracking # # Generated by Trac 1.0.12 # 06/03/24 05:50:20 Wed, 17 Dec 2014 17:52:37 GMT bburlacu [11694] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking.Tests (added) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking.Tests/GenealogyOperationsPerformanceTests.cs (added) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking.Tests/HeuristicLab.EvolutionTracking.Tests.csproj (added) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking.Tests/Properties (added) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking.Tests/Properties/AssemblyInfo.cs (added) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking/3.4/GenealogyGraph/GenealogyGraph.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic.Views/3.4/HeuristicLab.Problems.DataAnalysis.Symbolic.Views-3.4.csproj (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Tracking/SymbolicDataAnalysisExpressionAfterCrossoverOperator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Tracking/SymbolicDataAnalysisExpressionAfterManipulatorOperator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Tracking/SymbolicDataAnalysisExpressionBeforeCrossoverOperator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Tracking/SymbolicDataAnalysisExpressionBeforeManipulatorOperator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Tracking.sln (modified) #1772: Fixed cloning in tracking operators for symbolic data ... Wed, 03 Dec 2014 16:06:39 GMT bburlacu [11639] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking.Views/3.4/HeuristicLab.EvolutionTracking.Views-3.4.csproj (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking/3.4/Analyzers/GenealogyAnalyzer.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking/3.4/GenealogyGraph/GenealogyGraph.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking/3.4/HeuristicLab.EvolutionTracking-3.4.csproj (modified) #1772: Migrated the tracking plugins to .NET 4.5, small changes to ... Wed, 03 Dec 2014 16:04:46 GMT bburlacu [11638] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding.Views (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding.Views/3.4/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding.Views-3.4.csproj (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding.Views/3.4/SymbolicExpressionTreeChart.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Formatters/SymbolicExpressionTreeStringFormatter.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Grammars/EmptySymbolicExpressionTreeGrammar.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding-3.4.csproj (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/SymbolicExpressionTreeNode.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic.Views (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic.Views/3.4/Exporters/SymbolicSolutionExcelExporter.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic.Views/3.4/HeuristicLab.Problems.DataAnalysis.Symbolic.Views-3.4.csproj (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic.Views/3.4/Symbols/VariableConditionView.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic.Views/3.4/Symbols/VariableView.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic.Views/3.4/Tracking/FragmentGraphView.Designer.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic.Views/3.4/Tracking/FragmentGraphView.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Analyzers/SymbolicDataAnalysisUsefulGenesAnalyzer.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Formatters/SymbolicDataAnalysisExpressionExcelFormatter.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/HeuristicLab.Problems.DataAnalysis.Symbolic-3.4.csproj (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Matching/SymbolicExpressionTreeNodeComparer.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/SimilarityCalculators (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/SimilarityCalculators/BottomUpSimilarityCalculator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/SimilarityCalculators/PhenotypicSimilarityCalculator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Tracking/TraceCalculator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.TravelingSalesman (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.TravelingSalesman.Views (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.TravelingSalesman.Views/3.3/HeuristicLab.Problems.TravelingSalesman.Views-3.3.csproj (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.TravelingSalesman.Views/3.3/PathTSPTourView.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.TravelingSalesman/3.3/HeuristicLab.Problems.TravelingSalesman-3.3.csproj (modified) #1772: Merged trunk changes. Updated ... Mon, 27 Oct 2014 19:47:37 GMT bburlacu [11506] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking.Views/3.4/GenealogyGraphChart.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking.Views/3.4/GenealogyGraphView.Designer.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic.Views/3.4/Tracking/SymboldDataAnalysisGenealogyView.Designer.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic.Views/3.4/Tracking/SymboldDataAnalysisGenealogyView.cs (modified) #1772: Updated views (fixed position and anchors). Sun, 26 Oct 2014 21:20:26 GMT bburlacu [11503] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic.Views/3.4/HeuristicLab.Problems.DataAnalysis.Symbolic.Views-3.4.csproj (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic.Views/3.4/Tracking/SymboldDataAnalysisGenealogyView.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic.Views/3.4/Tracking/SymbolicDataAnalysisExpressionGenealogyGraphChart.Designer.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic.Views/3.4/Tracking/SymbolicDataAnalysisExpressionGenealogyGraphChart.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Tracking/TraceCalculator.cs (modified) #1772: Added handling of double click event in the genealogy graph ... Sun, 26 Oct 2014 21:07:40 GMT bburlacu [11502] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking/3.4/GenealogyGraph/GenealogyGraph.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking/3.4/GenealogyGraph/GenealogyGraphArc.cs (modified) #1772: Small refactoring in the `GenealogyGraph`. Fri, 24 Oct 2014 16:48:25 GMT bburlacu [11499] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Creators/FullTreeCreator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Creators/GrowTreeCreator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Creators/ProbabilisticTreeCreator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Creators/RampedHalfAndHalfTreeCreator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Creators/SymbolicExpressionTreeCreator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/CutPoint.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Grammars (copied) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding-3.4.csproj (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Interfaces/ISymbolicExpressionGrammar.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/SymbolicExpressionGrammar.cs (deleted) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/SymbolicExpressionGrammarBase.cs (deleted) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/SymbolicExpressionTreeGrammar.cs (deleted) #1772: Merged trunk changes. Fri, 24 Oct 2014 14:02:59 GMT bburlacu [11493] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Analyzers/BuildingBlockAnalyzers/SymbolicDataAnalysisPoly10Analyzer.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Tracking/TraceCalculator.cs (modified) #1772: Improved the way the `TraceCalculator` handles mutations, ... Wed, 22 Oct 2014 17:20:30 GMT bburlacu [11488] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/SimilarityCalculators/BottomUpSimilarityCalculator.cs (modified) #1772: Merged changes from the `BottomUpSimilarityCalculator` branch. Mon, 20 Oct 2014 23:31:20 GMT bburlacu [11482] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Analyzers/SymbolicDataAnalysisBottomUpDiversityAnalyzer.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Analyzers/SymbolicDataAnalysisMaxCommonSubtreeDiversityAnalyzer.cs (copied) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/HeuristicLab.Problems.DataAnalysis.Symbolic-3.4.csproj (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/SimilarityCalculators/BottomUpSimilarityCalculator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/SimilarityCalculators/MaxCommonSubtreeSimilarityCalculator.cs (modified) #1772: Added the ability to ignore variable weights or constant ... Thu, 16 Oct 2014 18:28:48 GMT bburlacu [11476] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Tracking/TraceCalculator.cs (modified) #1772: Small changes and improvements to `TraceCalculator.cs` Thu, 16 Oct 2014 18:22:14 GMT bburlacu [11475] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking/3.4/GenealogyGraph/GenealogyGraph.cs (modified) #1772: Small improvement to `GenealogyGraph.cs` Thu, 16 Oct 2014 13:52:41 GMT bburlacu [11473] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Tracking/TraceCalculator.cs (modified) #1772: Finished the `TraceCalculator`, added tracing for mutation ... Mon, 13 Oct 2014 23:37:43 GMT bburlacu [11462] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Analyzers (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Analyzers/BuildingBlockAnalyzers/SymbolicDataAnalysisPoly10Analyzer.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Analyzers/SymbolicDataAnalysisUsefulGenesAnalyzer.cs (modified) #1772: Fixed bug and improved the ... Mon, 13 Oct 2014 15:23:08 GMT bburlacu [11461] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Analyzers/BuildingBlockAnalyzers/SymbolicDataAnalysisPoly10Analyzer.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Analyzers/SymbolicDataAnalysisUsefulGenesAnalyzer.cs (added) #1772: Implemented poly-10 building blocks analyzer and useful genes ... Mon, 13 Oct 2014 11:17:27 GMT bburlacu [11460] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Compiler/SymbolicExpressionTreeLinearCompiler.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Formatters/SymbolicExpressionTreeStringFormatter.cs (modified) #1772: `HeuristicLab.Encodings.SymbolicExpressionTreeEncoding`: - ... Mon, 13 Oct 2014 11:14:25 GMT bburlacu [11459] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking/3.4/GenealogyGraph/GenealogyGraph.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking/3.4/GenealogyGraph/GenealogyGraphNode.cs (modified) #1772: `GenealogyGraph`: fix serialization `GenealogyGraphNode`: ... Mon, 13 Oct 2014 11:03:24 GMT bburlacu [11458] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4 (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Analyzers/BuildingBlockAnalyzers (added) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Analyzers/BuildingBlockAnalyzers/SymbolicDataAnalysisPoly10Analyzer.cs (added) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Crossovers (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Crossovers/SymbolicDataAnalysisExpressionDiversityPreservingCrossover.cs (added) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Crossovers/SymbolicDataAnalysisExpressionSizefairCrossover.cs (deleted) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Grammars/TypeCoherentExpressionGrammar.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/HeuristicLab.Problems.DataAnalysis.Symbolic-3.4.csproj (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Importer (copied) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Interfaces/ISymbolicDataAnalysisExpressionSimilarityCalculator.cs (moved) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Interpreter/OpCodes.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Interpreter/SymbolicDataAnalysisExpressionTreeLinearInterpreter.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Matching/SymbolicExpressionTreeMatching.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/SimilarityCalculators/BottomUpSimilarityCalculator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/SimilarityCalculators/MaxCommonSubtreeSimilarityCalculator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/SimilarityCalculators/PhenotypicSimilarityCalculator.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Symbols/Passthrough.cs (added) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Tracking/SymbolicDataAnalysisExpressionTracing.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Tracking/TraceCalculator.cs (added) #1772: `HeuristicLab.Problems.DataAnalysis.Symbolic`: - Merged ... Thu, 25 Sep 2014 15:14:51 GMT bburlacu [11390] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking/3.4/Analyzers/GenealogyAnalyzer.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking/3.4/GenealogyGraph/GenealogyGraph.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking/3.4/GenealogyGraph/Interfaces/IGenealogyGraph.cs (modified) * branches/HeuristicLab.EvolutionTracking/HeuristicLab.EvolutionTracking/3.4/Operators/BeforeCrossoverOperator.cs (modified) #1772: Simplified code in the `GenealogyAnalyzer` and removed useless ... Tue, 23 Sep 2014 15:16:28 GMT bburlacu [11388] * branches/HeuristicLab.EvolutionTracking/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Tracking/SymbolicDataAnalysisExpressionTracing.cs (modified) #1772: `SymbolicDataAnalysisExpressionTracing`: added more detailed ...