# # ChangeLog for branches/2925_AutoDiffForDynamicalModels # # Generated by Trac 1.0.12 # 11/28/24 19:05:04 Wed, 06 Mar 2019 15:20:36 GMT gkronber [16653] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Solution.cs (modified) #2925: added support for fixed numeric parameters as "constant variables" Wed, 06 Mar 2019 12:14:23 GMT gkronber [16652] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) #2925: allow arbitrary number of arguments to +,-,*,/ operators, ... Wed, 20 Feb 2019 06:43:25 GMT gkronber [16616] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Crossovers/SubtreeCrossover.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) #2925 added crossover probability (important for multi-encoding in ... Sat, 16 Feb 2019 05:53:44 GMT gkronber [16610] * branches/2925_AutoDiffForDynamicalModels/AutoDiffForDynamicalModelsTest/AutoDiffForDynamicalModelsTest.csproj (modified) * branches/2925_AutoDiffForDynamicalModels/AutoDiffForDynamicalModelsTest/TestOdeIdentification.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/HeuristicLab.Problems.DynamicalSystemsModelling-3.3.csproj (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Solution.cs (modified) #2925: added support for multiple training episodes (and log, exp ... Wed, 13 Feb 2019 16:29:49 GMT gkronber [16604] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Vector.cs (modified) #2925: efficiency improvements Wed, 13 Feb 2019 15:04:10 GMT gkronber [16603] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/OdeParameterIdentification.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Solution.cs (modified) #2925: scaling of residuals to target variance and update constant ... Wed, 13 Feb 2019 12:43:03 GMT gkronber [16602] * branches/2925_AutoDiffForDynamicalModels/AutoDiffForDynamicalModelsTest/TestOdeIdentification.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/OdeParameterIdentification.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Solution.cs (modified) #2925: write back optimized constants to trees Wed, 13 Feb 2019 09:14:03 GMT gkronber [16601] * branches/2925_AutoDiffForDynamicalModels/AutoDiffForDynamicalModelsTest/AutoDiffForDynamicalModelsTest.csproj (modified) * branches/2925_AutoDiffForDynamicalModels/AutoDiffForDynamicalModelsTest/Genetic Algorithm (GA).hl (deleted) * branches/2925_AutoDiffForDynamicalModels/AutoDiffForDynamicalModelsTest/TestGA.cs (deleted) * branches/2925_AutoDiffForDynamicalModels/AutoDiffForDynamicalModelsTest/TestOdeIdentification.cs (added) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Vector.cs (modified) #2925: refactored dynamical modelling code Tue, 12 Feb 2019 12:59:15 GMT gkronber [16600] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Solution.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Vector.cs (modified) #2925: made some simplifications (Vector) to aid debugging. Mon, 11 Feb 2019 17:12:03 GMT gkronber [16599] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Vector.cs (modified) #2925: changed code to use LM instead of LBFGS and removed ... Mon, 11 Feb 2019 13:15:47 GMT gkronber [16597] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/OdeParameterIdentification.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/SolutionView.Designer.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Vector.cs (modified) #2925: made some adaptations while debugging parameter identification ... Wed, 19 Dec 2018 06:51:00 GMT gkronber [16400] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Solution.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/SolutionView.Designer.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/SolutionView.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/SolutionView.resx (modified) #2925 small gui improvement Wed, 19 Dec 2018 06:43:36 GMT gkronber [16399] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/HeuristicLab.Problems.DynamicalSystemsModelling-3.3.csproj (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Solution.cs (added) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/SolutionView.Designer.cs (added) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/SolutionView.cs (added) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/SolutionView.resx (added) #2925: solution class and solution view Tue, 18 Dec 2018 18:22:41 GMT gkronber [16398] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Vector.cs (modified) #2925: small changes Tue, 18 Dec 2018 11:00:30 GMT gkronber [16395] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Vector.cs (modified) #2925 removed 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branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Tests/HeuristicLab.Problems.DataAnalysis.Symbolic-3.4/SymbolicDataAnalysisExpressionTreeSimplifierTest.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Tests/HeuristicLab.Problems.DataAnalysis.Symbolic-3.4/SymbolicExpressionTreeBottomUpSimilarityCalculatorTest.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Tests/HeuristicLab.Tests.csproj (modified) #2925 merged changes r15972:16382 from trunk to branch Tue, 27 Nov 2018 07:21:13 GMT gkronber [16329] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/OdeParameterIdentification.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) #2925: made several extensions in relation to blood glucose ... Mon, 05 Nov 2018 12:19:38 GMT gkronber [16275] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) #2925: changed random initialization of parameters and fixed two non- ... Thu, 01 Nov 2018 18:39:05 GMT gkronber [16268] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/HeuristicLab.Problems.DynamicalSystemsModelling-3.3.csproj (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/OdeParameterIdentification.cs (added) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/Problem.cs (modified) #2925 created a separate algorithm (similar to NLR but for parameter ... Wed, 24 Oct 2018 17:58:44 GMT gkronber [16256] * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/CVODES.cs (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/HeuristicLab.Problems.DynamicalSystemsModelling-3.3.csproj (modified) * branches/2925_AutoDiffForDynamicalModels/HeuristicLab.Problems.DynamicalSystemsModelling/3.3/sundials_cvodes-x64.dll (added) #2925: added x64 version of CVODES as well as dispatching code for ...