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Changeset 1838 for trunk/sources


Ignore:
Timestamp:
05/15/09 16:33:08 (16 years ago)
Author:
gkronber
Message:

adapted SVM demo engine to include model selection (based on validation set) and to work with new SVM operators. #627

File:
1 edited

Legend:

Unmodified
Added
Removed

  • trunk/sources/HeuristicLab.SupportVectorMachines/SupportVectorMachinesTest.hl

    r1828 r1838  
    4646                      <Variable Type="HeuristicLab.Core.Variable, HeuristicLab.Core-3.2" GUID="9e59e426-55f8-4cef-80a5-5e134b2055c0" Name="MaxNuIndex">
    4747                        <Value Type="HeuristicLab.Data.IntData, HeuristicLab.Data-3.2" GUID="165a63ed-836f-4203-8541-59d05759dd9a">8</Value>
    48                       </Variable>
    49                       <Variable Type="HeuristicLab.Core.Variable, HeuristicLab.Core-3.2" GUID="c685958d-18f7-4a49-9423-69a2d8f88148" Name="Nu">
    50                         <Value Type="HeuristicLab.Data.DoubleData, HeuristicLab.Data-3.2" GUID="c5a80f41-e911-42c5-83c8-8bc5f417e50c">0.5</Value>
    51                       </Variable>
    52                       <Variable Type="HeuristicLab.Core.Variable, HeuristicLab.Core-3.2" GUID="f68df718-31e4-4b97-b2be-0e026e22dde9" Name="Cost">
    53                         <Value Type="HeuristicLab.Data.DoubleData, HeuristicLab.Data-3.2" GUID="f8e8d950-91db-48e7-bfbf-8c03249ed50e">1</Value>
    5448                      </Variable>
    5549                    </Variables>
    … …  
    124118                  <SequentialProcessor Type="HeuristicLab.Operators.SequentialProcessor, HeuristicLab.Operators-3.2" GUID="b1ba9145-b2c1-47a1-954d-3289c4b40308" Name="NuLoop">
    125119                    <SubOperators>
    126                       <ProgrammableOperator Type="HeuristicLab.Operators.Programmable.ProgrammableOperator, HeuristicLab.Operators.Programmable-3.2" GUID="fc6e3f83-ff9e-4ae1-9ae9-3b550f47d754" Name="SetNextNu">
     120                      <ProgrammableOperator Type="HeuristicLab.Operators.Programmable.ProgrammableOperator, HeuristicLab.Operators.Programmable-3.2" GUID="2a8ee52c-87b0-4bff-b8f0-f54cda70a814" Name="ResetCostIndex">
    127121                        <SubOperators />
    128122                        <VariableInfos>
    129                           <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="de79f46d-5ead-4c8a-88c9-77c5630315fc" ActualName="NuIndex" FormalName="NuIndex" Description="" DataType="HeuristicLab.Data.IntData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
    130                           <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="e738cd98-7349-407d-a174-f5b947f5872a" ActualName="Nu" FormalName="Nu" Description="" DataType="HeuristicLab.Data.DoubleData, HeuristicLab.Data-3.2" Kind="Out" Local="False" />
    131                           <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="7a41ac19-6275-47fd-a792-0c1d44568741" ActualName="NuList" FormalName="NuList" Description="" DataType="HeuristicLab.Data.DoubleArrayData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
     123                          <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="312be4f1-5934-4093-bd13-ffa5c5c2b8f0" ActualName="CostIndex" FormalName="CostIndex" Description="" DataType="HeuristicLab.Data.IntData, HeuristicLab.Data-3.2" Kind="Out" Local="False" />
    132124                        </VariableInfos>
    133125                        <Variables />
    134126                        <Description>An operator that can be programmed for arbitrary needs.</Description>
    135                         <Code>double nu = NuList.Data[NuIndex.Data];
    136 Nu.Data = nu;</Code>
     127                        <Code>CostIndex.Data = 0;</Code>
    137128                      </ProgrammableOperator>
    138129                      <SequentialProcessor Type="HeuristicLab.Operators.SequentialProcessor, HeuristicLab.Operators-3.2" GUID="b9c58d3c-9455-47b4-91d4-e965a9d0c121" Name="CostLoop">
    139130                        <SubOperators>
    140                           <ProgrammableOperator Type="HeuristicLab.Operators.Programmable.ProgrammableOperator, HeuristicLab.Operators.Programmable-3.2" GUID="57566cfc-5844-4338-8ffe-fe330b4cdc57" Name="SetNextCost">
    141                             <SubOperators />
    142                             <VariableInfos>
    143                               <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="f2a97a3f-647d-4761-a41c-e5a978e72446" ActualName="Cost" FormalName="Cost" Description="" DataType="HeuristicLab.Data.DoubleData, HeuristicLab.Data-3.2" Kind="Out" Local="False" />
    144                               <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="7a7d1bf8-1bc9-4b7d-8bfb-e4322aa178f0" ActualName="CostList" FormalName="CostList" Description="" DataType="HeuristicLab.Data.DoubleArrayData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
    145                               <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="891f00ba-3ec2-499e-85b5-7be77e0fb288" ActualName="CostIndex" FormalName="CostIndex" Description="" DataType="HeuristicLab.Data.IntData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
    146                             </VariableInfos>
    147                             <Variables />
    148                             <Description>An operator that can be programmed for arbitrary needs.</Description>
    149                             <Code>double cost = CostList.Data[CostIndex.Data];
    150 Cost.Data = cost;</Code>
    151                           </ProgrammableOperator>
    152131                          <SubScopesCreater Type="HeuristicLab.Operators.SubScopesCreater, HeuristicLab.Operators-3.2" GUID="98184269-cf68-435d-852b-976fab8873dc" Name="SubScopesCreater">
    153132                            <SubOperators />
    … …  
    165144                              <SequentialProcessor Type="HeuristicLab.Operators.SequentialProcessor, HeuristicLab.Operators-3.2" GUID="f866d259-df0c-4655-aec4-476fb08aca13" Name="SequentialProcessor">
    166145                                <SubOperators>
    167                                   <SupportVectorCreator Type="HeuristicLab.SupportVectorMachines.SupportVectorCreator, HeuristicLab.SupportVectorMachines-3.2" GUID="4507eb6b-4f49-49d3-8a63-151ae8f9d9af" Name="SupportVectorCreator">
    168                                     <SubOperators />
    169                                     <VariableInfos>
    170                                       <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="21487c92-3831-4cf1-881c-cb7763c97b8c" ActualName="Dataset" FormalName="Dataset" Description="Dataset with all samples on which to apply the function" DataType="HeuristicLab.DataAnalysis.Dataset, HeuristicLab.DataAnalysis-3.2" Kind="In" Local="False" />
    171                                       <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="576f017c-6f37-467d-a397-b5e6c225b94e" ActualName="AllowedFeatures" FormalName="AllowedFeatures" Description="List of indexes of allowed features" DataType="HeuristicLab.Data.ItemList`1[[HeuristicLab.Data.IntData, HeuristicLab.Data-3.2]], HeuristicLab.Data-3.2" Kind="In" Local="False" />
    172                                       <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="1d1444a1-42c0-43e1-81ca-efbcf1c5a37c" ActualName="TargetVariable" FormalName="TargetVariable" Description="Index of the column of the dataset that holds the target variable" DataType="HeuristicLab.Data.IntData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
    173                                       <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="5811d130-38f3-45b1-ad2d-45adf73ea61d" ActualName="TrainingSamplesStart" FormalName="SamplesStart" Description="Start index of samples in dataset to evaluate" DataType="HeuristicLab.Data.IntData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
    174                                       <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="145cbe91-d6be-444e-b57e-1f55064300d2" ActualName="TrainingSamplesEnd" FormalName="SamplesEnd" Description="End index of samples in dataset to evaluate" DataType="HeuristicLab.Data.IntData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
    175                                       <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="32c0be7f-43c0-404f-855d-89445e42912d" ActualName="Type" FormalName="SVMType" Description="String describing which SVM type is used. Valid inputs are: C_SVC, NU_SVC, ONE_CLASS, EPSILON_SVR, NU_SVR" DataType="HeuristicLab.Data.StringData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
    176                                       <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="8de56d3b-80a0-4f71-bdd7-5d6145d78fa2" ActualName="KernelType" FormalName="SVMKernelType" Description="String describing which SVM kernel is used. Valid inputs are: LINEAR, POLY, RBF, SIGMOID, PRECOMPUTED" DataType="HeuristicLab.Data.StringData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
    177                                       <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="1c93224b-abbf-493e-9772-e1df2a91385f" ActualName="Cost" FormalName="SVMCost" Description="Cost parameter (C) of C-SVC, epsilon-SVR and nu-SVR" DataType="HeuristicLab.Data.DoubleData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
    178                                       <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="e8bb0a28-7844-4d1d-add6-d650f594f6ac" ActualName="Nu" FormalName="SVMNu" Description="Nu parameter of nu-SVC, one-class SVM and nu-SVR" DataType="HeuristicLab.Data.DoubleData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
    179                                       <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="07aa101a-191a-49f0-ad8d-deceedbdca8f" ActualName="Gamma" FormalName="SVMGamma" Description="Gamma parameter in kernel function" DataType="HeuristicLab.Data.DoubleData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
    180                                       <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="5ce34cce-cef9-4bdd-b883-257180e917f3" ActualName="Model" FormalName="SVMModel" Description="Represent the model learned by the SVM" DataType="HeuristicLab.Data.ObjectData, HeuristicLab.Data-3.2" Kind="New" Local="False" />
    181                                       <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="fa3c8f5e-4a7e-4f09-ba62-c55951b045b4" ActualName="RangeTransform" FormalName="SVMRangeTransform" Description="The applied transformation during the learning the model" DataType="HeuristicLab.Data.ObjectData, HeuristicLab.Data-3.2" Kind="New" Local="False" />
     146                                  <ProgrammableOperator Type="HeuristicLab.Operators.Programmable.ProgrammableOperator, HeuristicLab.Operators.Programmable-3.2" GUID="fc6e3f83-ff9e-4ae1-9ae9-3b550f47d754" Name="SetNextNu">
     147                                    <SubOperators />
     148                                    <VariableInfos>
     149                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="de79f46d-5ead-4c8a-88c9-77c5630315fc" ActualName="NuIndex" FormalName="NuIndex" Description="" DataType="HeuristicLab.Data.IntData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
     150                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="da3ec3bf-77f3-4642-80e3-a7f776929631" ActualName="Nu" FormalName="Nu" Description="" DataType="HeuristicLab.Data.DoubleData, HeuristicLab.Data-3.2" Kind="New" Local="False" />
     151                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="7a41ac19-6275-47fd-a792-0c1d44568741" ActualName="NuList" FormalName="NuList" Description="" DataType="HeuristicLab.Data.DoubleArrayData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
     152                                    </VariableInfos>
     153                                    <Variables />
     154                                    <Description>An operator that can be programmed for arbitrary needs.</Description>
     155                                    <Code>double nu = NuList.Data[NuIndex.Data];
     156Nu.Data = nu;</Code>
     157                                  </ProgrammableOperator>
     158                                  <ProgrammableOperator Type="HeuristicLab.Operators.Programmable.ProgrammableOperator, HeuristicLab.Operators.Programmable-3.2" GUID="57566cfc-5844-4338-8ffe-fe330b4cdc57" Name="SetNextCost">
     159                                    <SubOperators />
     160                                    <VariableInfos>
     161                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="f2e160eb-ac7b-4d96-9db3-efbc64570ec5" ActualName="Cost" FormalName="Cost" Description="" DataType="HeuristicLab.Data.DoubleData, HeuristicLab.Data-3.2" Kind="New" Local="False" />
     162                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="7a7d1bf8-1bc9-4b7d-8bfb-e4322aa178f0" ActualName="CostList" FormalName="CostList" Description="" DataType="HeuristicLab.Data.DoubleArrayData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
     163                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="891f00ba-3ec2-499e-85b5-7be77e0fb288" ActualName="CostIndex" FormalName="CostIndex" Description="" DataType="HeuristicLab.Data.IntData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
     164                                    </VariableInfos>
     165                                    <Variables />
     166                                    <Description>An operator that can be programmed for arbitrary needs.</Description>
     167                                    <Code>double cost = CostList.Data[CostIndex.Data];
     168Cost.Data = cost;</Code>
     169                                  </ProgrammableOperator>
     170                                  <SupportVectorCreator Type="HeuristicLab.SupportVectorMachines.SupportVectorCreator, HeuristicLab.SupportVectorMachines-3.2" GUID="4c0263f0-5501-4004-8896-ed96623c90d1" Name="SupportVectorCreator">
     171                                    <SubOperators />
     172                                    <VariableInfos>
     173                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="cbc21ba0-1e59-4991-bd11-196507c00b8e" ActualName="Dataset" FormalName="Dataset" Description="Dataset with all samples on which to apply the function" DataType="HeuristicLab.DataAnalysis.Dataset, HeuristicLab.DataAnalysis-3.2" Kind="In" Local="False" />
     174                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="cae116b2-fb3d-424b-b587-ab127f84a3f9" ActualName="AllowedFeatures" FormalName="AllowedFeatures" Description="List of indexes of allowed features" DataType="HeuristicLab.Data.ItemList`1[[HeuristicLab.Data.IntData, HeuristicLab.Data-3.2]], HeuristicLab.Data-3.2" Kind="In" Local="False" />
     175                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="b4457e08-6954-4000-b782-04d5f6503a25" ActualName="TargetVariable" FormalName="TargetVariable" Description="Index of the column of the dataset that holds the target variable" DataType="HeuristicLab.Data.IntData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
     176                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="efc075a0-fd5e-4195-9b80-fe93b39255d7" ActualName="TrainingSamplesStart" FormalName="SamplesStart" Description="Start index of samples in dataset to evaluate" DataType="HeuristicLab.Data.IntData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
     177                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="4dda2850-e219-4f5c-acb5-58bd6fb08418" ActualName="TrainingSamplesEnd" FormalName="SamplesEnd" Description="End index of samples in dataset to evaluate" DataType="HeuristicLab.Data.IntData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
     178                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="1eb60ebc-db36-4bc8-862d-3cc9e724e359" ActualName="Type" FormalName="SVMType" Description="String describing which SVM type is used. Valid inputs are: C_SVC, NU_SVC, ONE_CLASS, EPSILON_SVR, NU_SVR" DataType="HeuristicLab.Data.StringData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
     179                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="c67af89d-ee14-4c67-9758-d136563e4c9a" ActualName="KernelType" FormalName="SVMKernelType" Description="String describing which SVM kernel is used. Valid inputs are: LINEAR, POLY, RBF, SIGMOID, PRECOMPUTED" DataType="HeuristicLab.Data.StringData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
     180                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="1eeae7fe-3a93-4aec-bcd2-8572282751a4" ActualName="Cost" FormalName="SVMCost" Description="Cost parameter (C) of C-SVC, epsilon-SVR and nu-SVR" DataType="HeuristicLab.Data.DoubleData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
     181                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="b7ae66a1-cc60-4c70-a8d2-d00651788da6" ActualName="Nu" FormalName="SVMNu" Description="Nu parameter of nu-SVC, one-class SVM and nu-SVR" DataType="HeuristicLab.Data.DoubleData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
     182                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="059593e0-0761-4bb8-b8d5-2eb464821a57" ActualName="Gamma" FormalName="SVMGamma" Description="Gamma parameter in kernel function" DataType="HeuristicLab.Data.DoubleData, HeuristicLab.Data-3.2" Kind="In" Local="False" />
     183                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="0805fd25-8b23-4460-9965-f69263868686" ActualName="Model" FormalName="SVMModel" Description="Represent the model learned by the SVM" DataType="HeuristicLab.Data.SVMModel, HeuristicLab.SupportVectorMachines-3.2" Kind="New, Out" Local="False" />
     184                                      <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="bc43a499-4abe-4642-846c-4df681a7ca73" ActualName="RangeTransform" FormalName="SVMRangeTransform" Description="The applied transformation during the learning the model" DataType="HeuristicLab.Data.SVMRangeTransform, HeuristicLab.SupportVectorMachines-3.2" Kind="New, Out" Local="False" />
    182185                                    </VariableInfos>
    183186                                    <Variables />
    184187                                  </SupportVectorCreator>
    185                                   <SupportVectorEvaluator Type="HeuristicLab.SupportVectorMachines.SupportVectorEvaluator, HeuristicLab.SupportVectorMachines-3.2" GUID="098a520a-4d0e-4303-b3d4-cb301b136fb9" Name="SupportVectorEvaluator">
    186                                     <SubOperators />
    187                                     <VariableInfos>
    188                                       <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="856c3d42-ca1c-4eb8-babf-cba17f1a65df" ActualName="Dataset" FormalName="Dataset" Description="Dataset with all samples on which to apply the function" DataType="HeuristicLab.DataAnalysis.Dataset, HeuristicLab.DataAnalysis-3.2" Kind="In" Local="False" />
    189                                       <VariableInfo Type="HeuristicLab.Core.VariableInfo, HeuristicLab.Core-3.2" GUID="af856a06-0134-404f-84f8-89f605edbbd6" ActualName="AllowedFeatures" FormalName="AllowedFeatures" Description="List of indexes of allowed features" DataType="HeuristicLab.Data.ItemList`1[[HeuristicLab.Data.IntData, HeuristicLab.Data-3.2]], HeuristicLab.Data-3.2" Kind="In" Local="False" />
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    … …  
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    … …  
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