[5816] | 1 | #region License Information
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| 2 | /* HeuristicLab
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[12012] | 3 | * Copyright (C) 2002-2015 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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[5816] | 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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[6588] | 22 | using System;
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[5816] | 23 | using System.Collections.Generic;
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| 24 | using System.Linq;
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[6612] | 25 | using HeuristicLab.Collections;
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[5816] | 26 | using HeuristicLab.Common;
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| 27 | using HeuristicLab.Core;
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[6588] | 28 | using HeuristicLab.Data;
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[5816] | 29 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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| 30 |
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| 31 | namespace HeuristicLab.Problems.DataAnalysis {
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| 32 | /// <summary>
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| 33 | /// Represents regression solutions that contain an ensemble of multiple regression models
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| 34 | /// </summary>
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| 35 | [StorableClass]
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| 36 | [Item("Regression Ensemble Solution", "A regression solution that contains an ensemble of multiple regression models")]
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[12504] | 37 | [Creatable(CreatableAttribute.Categories.DataAnalysisEnsembles, Priority = 100)]
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[8724] | 38 | public sealed class RegressionEnsembleSolution : RegressionSolutionBase, IRegressionEnsembleSolution {
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[8167] | 39 | private readonly Dictionary<int, double> trainingEvaluationCache = new Dictionary<int, double>();
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| 40 | private readonly Dictionary<int, double> testEvaluationCache = new Dictionary<int, double>();
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[8724] | 41 | private readonly Dictionary<int, double> evaluationCache = new Dictionary<int, double>();
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[8151] | 42 |
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[5816] | 43 | public new IRegressionEnsembleModel Model {
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| 44 | get { return (IRegressionEnsembleModel)base.Model; }
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| 45 | }
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| 46 |
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[6666] | 47 | public new RegressionEnsembleProblemData ProblemData {
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| 48 | get { return (RegressionEnsembleProblemData)base.ProblemData; }
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| 49 | set { base.ProblemData = value; }
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| 50 | }
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| 51 |
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[12816] | 52 | [Storable]
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[6612] | 53 | private readonly ItemCollection<IRegressionSolution> regressionSolutions;
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| 54 | public IItemCollection<IRegressionSolution> RegressionSolutions {
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| 55 | get { return regressionSolutions; }
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| 56 | }
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| 57 |
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[5816] | 58 | [Storable]
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[8152] | 59 | private readonly Dictionary<IRegressionModel, IntRange> trainingPartitions;
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[5816] | 60 | [Storable]
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[8152] | 61 | private readonly Dictionary<IRegressionModel, IntRange> testPartitions;
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[5816] | 62 |
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| 63 | [StorableConstructor]
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[6612] | 64 | private RegressionEnsembleSolution(bool deserializing)
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| 65 | : base(deserializing) {
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| 66 | regressionSolutions = new ItemCollection<IRegressionSolution>();
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| 67 | }
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| 68 | [StorableHook(HookType.AfterDeserialization)]
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| 69 | private void AfterDeserialization() {
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[12816] | 70 | if (!regressionSolutions.Any()) {
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| 71 | foreach (var model in Model.Models) {
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| 72 | IRegressionProblemData problemData = (IRegressionProblemData)ProblemData.Clone();
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| 73 | problemData.TrainingPartition.Start = trainingPartitions[model].Start;
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| 74 | problemData.TrainingPartition.End = trainingPartitions[model].End;
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| 75 | problemData.TestPartition.Start = testPartitions[model].Start;
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| 76 | problemData.TestPartition.End = testPartitions[model].End;
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[6612] | 77 |
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[12816] | 78 | regressionSolutions.Add(model.CreateRegressionSolution(problemData));
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| 79 | }
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[6612] | 80 | }
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| 81 | RegisterRegressionSolutionsEventHandler();
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| 82 | }
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| 83 |
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[6592] | 84 | private RegressionEnsembleSolution(RegressionEnsembleSolution original, Cloner cloner)
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[5816] | 85 | : base(original, cloner) {
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[6239] | 86 | trainingPartitions = new Dictionary<IRegressionModel, IntRange>();
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| 87 | testPartitions = new Dictionary<IRegressionModel, IntRange>();
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[6302] | 88 | foreach (var pair in original.trainingPartitions) {
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| 89 | trainingPartitions[cloner.Clone(pair.Key)] = cloner.Clone(pair.Value);
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[6239] | 90 | }
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[6302] | 91 | foreach (var pair in original.testPartitions) {
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| 92 | testPartitions[cloner.Clone(pair.Key)] = cloner.Clone(pair.Value);
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| 93 | }
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[6612] | 94 |
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[8174] | 95 | trainingEvaluationCache = new Dictionary<int, double>(original.ProblemData.TrainingIndices.Count());
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| 96 | testEvaluationCache = new Dictionary<int, double>(original.ProblemData.TestIndices.Count());
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| 97 |
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[6612] | 98 | regressionSolutions = cloner.Clone(original.regressionSolutions);
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| 99 | RegisterRegressionSolutionsEventHandler();
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[5816] | 100 | }
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[6239] | 101 |
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[6666] | 102 | public RegressionEnsembleSolution()
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| 103 | : base(new RegressionEnsembleModel(), RegressionEnsembleProblemData.EmptyProblemData) {
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| 104 | trainingPartitions = new Dictionary<IRegressionModel, IntRange>();
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| 105 | testPartitions = new Dictionary<IRegressionModel, IntRange>();
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| 106 | regressionSolutions = new ItemCollection<IRegressionSolution>();
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| 107 |
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| 108 | RegisterRegressionSolutionsEventHandler();
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| 109 | }
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| 110 |
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[7738] | 111 | public RegressionEnsembleSolution(IRegressionProblemData problemData)
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| 112 | : this(Enumerable.Empty<IRegressionModel>(), problemData) {
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| 113 | }
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| 114 |
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[5816] | 115 | public RegressionEnsembleSolution(IEnumerable<IRegressionModel> models, IRegressionProblemData problemData)
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[6612] | 116 | : this(models, problemData,
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| 117 | models.Select(m => (IntRange)problemData.TrainingPartition.Clone()),
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| 118 | models.Select(m => (IntRange)problemData.TestPartition.Clone())
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| 119 | ) { }
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[5816] | 120 |
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| 121 | public RegressionEnsembleSolution(IEnumerable<IRegressionModel> models, IRegressionProblemData problemData, IEnumerable<IntRange> trainingPartitions, IEnumerable<IntRange> testPartitions)
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[6612] | 122 | : base(new RegressionEnsembleModel(Enumerable.Empty<IRegressionModel>()), new RegressionEnsembleProblemData(problemData)) {
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[5816] | 123 | this.trainingPartitions = new Dictionary<IRegressionModel, IntRange>();
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| 124 | this.testPartitions = new Dictionary<IRegressionModel, IntRange>();
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[6612] | 125 | this.regressionSolutions = new ItemCollection<IRegressionSolution>();
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| 126 |
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| 127 | List<IRegressionSolution> solutions = new List<IRegressionSolution>();
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| 128 | var modelEnumerator = models.GetEnumerator();
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| 129 | var trainingPartitionEnumerator = trainingPartitions.GetEnumerator();
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| 130 | var testPartitionEnumerator = testPartitions.GetEnumerator();
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| 131 |
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| 132 | while (modelEnumerator.MoveNext() & trainingPartitionEnumerator.MoveNext() & testPartitionEnumerator.MoveNext()) {
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| 133 | var p = (IRegressionProblemData)problemData.Clone();
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| 134 | p.TrainingPartition.Start = trainingPartitionEnumerator.Current.Start;
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| 135 | p.TrainingPartition.End = trainingPartitionEnumerator.Current.End;
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| 136 | p.TestPartition.Start = testPartitionEnumerator.Current.Start;
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| 137 | p.TestPartition.End = testPartitionEnumerator.Current.End;
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| 138 |
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| 139 | solutions.Add(modelEnumerator.Current.CreateRegressionSolution(p));
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| 140 | }
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| 141 | if (modelEnumerator.MoveNext() | trainingPartitionEnumerator.MoveNext() | testPartitionEnumerator.MoveNext()) {
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| 142 | throw new ArgumentException();
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| 143 | }
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| 144 |
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[8174] | 145 | trainingEvaluationCache = new Dictionary<int, double>(problemData.TrainingIndices.Count());
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| 146 | testEvaluationCache = new Dictionary<int, double>(problemData.TestIndices.Count());
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| 147 |
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[6612] | 148 | RegisterRegressionSolutionsEventHandler();
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| 149 | regressionSolutions.AddRange(solutions);
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[5816] | 150 | }
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| 151 |
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| 152 | public override IDeepCloneable Clone(Cloner cloner) {
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| 153 | return new RegressionEnsembleSolution(this, cloner);
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| 154 | }
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[6612] | 155 | private void RegisterRegressionSolutionsEventHandler() {
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| 156 | regressionSolutions.ItemsAdded += new CollectionItemsChangedEventHandler<IRegressionSolution>(regressionSolutions_ItemsAdded);
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| 157 | regressionSolutions.ItemsRemoved += new CollectionItemsChangedEventHandler<IRegressionSolution>(regressionSolutions_ItemsRemoved);
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| 158 | regressionSolutions.CollectionReset += new CollectionItemsChangedEventHandler<IRegressionSolution>(regressionSolutions_CollectionReset);
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| 159 | }
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[5816] | 160 |
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[6612] | 161 | #region Evaluation
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[8724] | 162 | public override IEnumerable<double> EstimatedValues {
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| 163 | get { return GetEstimatedValues(Enumerable.Range(0, ProblemData.Dataset.Rows)); }
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| 164 | }
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| 165 |
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[5816] | 166 | public override IEnumerable<double> EstimatedTrainingValues {
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[8152] | 167 | get {
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| 168 | var rows = ProblemData.TrainingIndices;
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[8167] | 169 | var rowsToEvaluate = rows.Except(trainingEvaluationCache.Keys);
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[8152] | 170 | var rowsEnumerator = rowsToEvaluate.GetEnumerator();
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| 171 | var valuesEnumerator = GetEstimatedValues(rowsToEvaluate, (r, m) => RowIsTrainingForModel(r, m) && !RowIsTestForModel(r, m)).GetEnumerator();
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| 172 |
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| 173 | while (rowsEnumerator.MoveNext() & valuesEnumerator.MoveNext()) {
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[8167] | 174 | trainingEvaluationCache.Add(rowsEnumerator.Current, valuesEnumerator.Current);
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[8152] | 175 | }
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| 176 |
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[8167] | 177 | return rows.Select(row => trainingEvaluationCache[row]);
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[8152] | 178 | }
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[5816] | 179 | }
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| 180 |
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| 181 | public override IEnumerable<double> EstimatedTestValues {
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[8152] | 182 | get {
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| 183 | var rows = ProblemData.TestIndices;
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[8167] | 184 | var rowsToEvaluate = rows.Except(testEvaluationCache.Keys);
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[8152] | 185 | var rowsEnumerator = rowsToEvaluate.GetEnumerator();
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| 186 | var valuesEnumerator = GetEstimatedValues(rowsToEvaluate, RowIsTestForModel).GetEnumerator();
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| 187 |
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| 188 | while (rowsEnumerator.MoveNext() & valuesEnumerator.MoveNext()) {
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[8167] | 189 | testEvaluationCache.Add(rowsEnumerator.Current, valuesEnumerator.Current);
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[8152] | 190 | }
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| 191 |
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[8167] | 192 | return rows.Select(row => testEvaluationCache[row]);
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[8152] | 193 | }
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[8151] | 194 | }
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[5816] | 195 |
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[8151] | 196 | private IEnumerable<double> GetEstimatedValues(IEnumerable<int> rows, Func<int, IRegressionModel, bool> modelSelectionPredicate) {
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| 197 | var estimatedValuesEnumerators = (from model in Model.Models
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| 198 | select new { Model = model, EstimatedValuesEnumerator = model.GetEstimatedValues(ProblemData.Dataset, rows).GetEnumerator() })
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| 199 | .ToList();
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| 200 | var rowsEnumerator = rows.GetEnumerator();
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| 201 | // aggregate to make sure that MoveNext is called for all enumerators
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| 202 | while (rowsEnumerator.MoveNext() & estimatedValuesEnumerators.Select(en => en.EstimatedValuesEnumerator.MoveNext()).Aggregate(true, (acc, b) => acc & b)) {
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| 203 | int currentRow = rowsEnumerator.Current;
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[5816] | 204 |
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[8151] | 205 | var selectedEnumerators = from pair in estimatedValuesEnumerators
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| 206 | where modelSelectionPredicate(currentRow, pair.Model)
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| 207 | select pair.EstimatedValuesEnumerator;
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| 208 |
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| 209 | yield return AggregateEstimatedValues(selectedEnumerators.Select(x => x.Current));
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[5816] | 210 | }
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| 211 | }
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| 212 |
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[6254] | 213 | private bool RowIsTrainingForModel(int currentRow, IRegressionModel model) {
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| 214 | return trainingPartitions == null || !trainingPartitions.ContainsKey(model) ||
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| 215 | (trainingPartitions[model].Start <= currentRow && currentRow < trainingPartitions[model].End);
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| 216 | }
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| 217 |
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| 218 | private bool RowIsTestForModel(int currentRow, IRegressionModel model) {
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| 219 | return testPartitions == null || !testPartitions.ContainsKey(model) ||
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| 220 | (testPartitions[model].Start <= currentRow && currentRow < testPartitions[model].End);
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| 221 | }
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| 222 |
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[5816] | 223 | public override IEnumerable<double> GetEstimatedValues(IEnumerable<int> rows) {
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[8167] | 224 | var rowsToEvaluate = rows.Except(evaluationCache.Keys);
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[8152] | 225 | var rowsEnumerator = rowsToEvaluate.GetEnumerator();
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| 226 | var valuesEnumerator = (from xs in GetEstimatedValueVectors(ProblemData.Dataset, rowsToEvaluate)
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| 227 | select AggregateEstimatedValues(xs))
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| 228 | .GetEnumerator();
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| 229 |
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| 230 | while (rowsEnumerator.MoveNext() & valuesEnumerator.MoveNext()) {
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[8167] | 231 | evaluationCache.Add(rowsEnumerator.Current, valuesEnumerator.Current);
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[8152] | 232 | }
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| 233 |
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[8167] | 234 | return rows.Select(row => evaluationCache[row]);
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[5816] | 235 | }
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| 236 |
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[12509] | 237 | public IEnumerable<IEnumerable<double>> GetEstimatedValueVectors(IDataset dataset, IEnumerable<int> rows) {
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[6982] | 238 | if (!Model.Models.Any()) yield break;
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[5816] | 239 | var estimatedValuesEnumerators = (from model in Model.Models
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| 240 | select model.GetEstimatedValues(dataset, rows).GetEnumerator())
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| 241 | .ToList();
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| 242 |
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| 243 | while (estimatedValuesEnumerators.All(en => en.MoveNext())) {
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| 244 | yield return from enumerator in estimatedValuesEnumerators
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| 245 | select enumerator.Current;
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| 246 | }
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| 247 | }
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| 248 |
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| 249 | private double AggregateEstimatedValues(IEnumerable<double> estimatedValues) {
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[6238] | 250 | return estimatedValues.DefaultIfEmpty(double.NaN).Average();
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[6254] | 251 | }
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[6612] | 252 | #endregion
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[6520] | 253 |
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[6666] | 254 | protected override void OnProblemDataChanged() {
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[8167] | 255 | trainingEvaluationCache.Clear();
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| 256 | testEvaluationCache.Clear();
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| 257 | evaluationCache.Clear();
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[6666] | 258 | IRegressionProblemData problemData = new RegressionProblemData(ProblemData.Dataset,
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| 259 | ProblemData.AllowedInputVariables,
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| 260 | ProblemData.TargetVariable);
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| 261 | problemData.TrainingPartition.Start = ProblemData.TrainingPartition.Start;
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| 262 | problemData.TrainingPartition.End = ProblemData.TrainingPartition.End;
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| 263 | problemData.TestPartition.Start = ProblemData.TestPartition.Start;
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| 264 | problemData.TestPartition.End = ProblemData.TestPartition.End;
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| 265 |
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| 266 | foreach (var solution in RegressionSolutions) {
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| 267 | if (solution is RegressionEnsembleSolution)
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| 268 | solution.ProblemData = ProblemData;
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| 269 | else
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| 270 | solution.ProblemData = problemData;
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| 271 | }
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| 272 | foreach (var trainingPartition in trainingPartitions.Values) {
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| 273 | trainingPartition.Start = ProblemData.TrainingPartition.Start;
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| 274 | trainingPartition.End = ProblemData.TrainingPartition.End;
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| 275 | }
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| 276 | foreach (var testPartition in testPartitions.Values) {
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| 277 | testPartition.Start = ProblemData.TestPartition.Start;
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| 278 | testPartition.End = ProblemData.TestPartition.End;
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| 279 | }
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| 280 |
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| 281 | base.OnProblemDataChanged();
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| 282 | }
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| 283 |
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[6612] | 284 | public void AddRegressionSolutions(IEnumerable<IRegressionSolution> solutions) {
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| 285 | regressionSolutions.AddRange(solutions);
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[8152] | 286 |
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[8167] | 287 | trainingEvaluationCache.Clear();
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| 288 | testEvaluationCache.Clear();
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| 289 | evaluationCache.Clear();
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[6612] | 290 | }
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| 291 | public void RemoveRegressionSolutions(IEnumerable<IRegressionSolution> solutions) {
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| 292 | regressionSolutions.RemoveRange(solutions);
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[8152] | 293 |
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[8167] | 294 | trainingEvaluationCache.Clear();
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| 295 | testEvaluationCache.Clear();
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| 296 | evaluationCache.Clear();
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[6612] | 297 | }
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[6520] | 298 |
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[6612] | 299 | private void regressionSolutions_ItemsAdded(object sender, CollectionItemsChangedEventArgs<IRegressionSolution> e) {
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| 300 | foreach (var solution in e.Items) AddRegressionSolution(solution);
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[6520] | 301 | RecalculateResults();
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| 302 | }
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[6612] | 303 | private void regressionSolutions_ItemsRemoved(object sender, CollectionItemsChangedEventArgs<IRegressionSolution> e) {
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| 304 | foreach (var solution in e.Items) RemoveRegressionSolution(solution);
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| 305 | RecalculateResults();
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| 306 | }
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| 307 | private void regressionSolutions_CollectionReset(object sender, CollectionItemsChangedEventArgs<IRegressionSolution> e) {
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| 308 | foreach (var solution in e.OldItems) RemoveRegressionSolution(solution);
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| 309 | foreach (var solution in e.Items) AddRegressionSolution(solution);
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| 310 | RecalculateResults();
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| 311 | }
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[6520] | 312 |
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[6612] | 313 | private void AddRegressionSolution(IRegressionSolution solution) {
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| 314 | if (Model.Models.Contains(solution.Model)) throw new ArgumentException();
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| 315 | Model.Add(solution.Model);
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| 316 | trainingPartitions[solution.Model] = solution.ProblemData.TrainingPartition;
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| 317 | testPartitions[solution.Model] = solution.ProblemData.TestPartition;
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[8152] | 318 |
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[8167] | 319 | trainingEvaluationCache.Clear();
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| 320 | testEvaluationCache.Clear();
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| 321 | evaluationCache.Clear();
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[6612] | 322 | }
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[6520] | 323 |
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[6612] | 324 | private void RemoveRegressionSolution(IRegressionSolution solution) {
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| 325 | if (!Model.Models.Contains(solution.Model)) throw new ArgumentException();
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| 326 | Model.Remove(solution.Model);
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| 327 | trainingPartitions.Remove(solution.Model);
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| 328 | testPartitions.Remove(solution.Model);
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[8152] | 329 |
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[8167] | 330 | trainingEvaluationCache.Clear();
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| 331 | testEvaluationCache.Clear();
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| 332 | evaluationCache.Clear();
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[6520] | 333 | }
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[5816] | 334 | }
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| 335 | }
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