[10368] | 1 | #region License Information
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| 2 |
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| 3 | /* HeuristicLab
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[12012] | 4 | * Copyright (C) 2002-2015 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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[10368] | 5 | *
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| 6 | * This file is part of HeuristicLab.
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| 7 | *
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| 8 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 9 | * it under the terms of the GNU General Public License as published by
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| 10 | * the Free Software Foundation, either version 3 of the License, or
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| 11 | * (at your option) any later version.
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| 12 | *
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| 13 | * HeuristicLab is distributed in the hope that it will be useful,
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| 14 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 15 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 16 | * GNU General Public License for more details.
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| 17 | *
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| 18 | * You should have received a copy of the GNU General Public License
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| 19 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 20 | */
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| 21 |
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| 22 | #endregion
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| 23 |
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| 24 | using System.Linq;
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| 25 | using HeuristicLab.Common;
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| 26 | using HeuristicLab.Core;
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| 27 | using HeuristicLab.Data;
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| 28 | using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
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| 29 | using HeuristicLab.Operators;
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| 30 | using HeuristicLab.Parameters;
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| 31 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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| 32 |
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| 33 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic {
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| 34 | [StorableClass]
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| 35 | [Item("SymbolicExpressionTreePruningOperator", "An operator that replaces introns with constant values in a symbolic expression tree.")]
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[10469] | 36 | public abstract class SymbolicDataAnalysisExpressionPruningOperator : SingleSuccessorOperator {
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| 37 | #region parameter names
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| 38 | private const string ProblemDataParameterName = "ProblemData";
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| 39 | private const string SymbolicDataAnalysisModelParameterName = "SymbolicDataAnalysisModel";
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| 40 | private const string ImpactValuesCalculatorParameterName = "ImpactValuesCalculator";
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| 41 | private const string PrunedSubtreesParameterName = "PrunedSubtrees";
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| 42 | private const string PrunedTreesParameterName = "PrunedTrees";
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| 43 | private const string FitnessCalculationPartitionParameterName = "FitnessCalculationPartition";
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| 44 | private const string NodeImpactThresholdParameterName = "ImpactThreshold";
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| 45 | private const string PruneOnlyZeroImpactNodesParameterName = "PruneOnlyZeroImpactNodes";
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| 46 | private const string SymbolicExpressionTreeParameterName = "SymbolicExpressionTree"; // the tree to be pruned
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| 47 | private const string QualityParameterName = "Quality"; // the quality
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| 48 | private const string EstimationLimitsParameterName = "EstimationLimits";
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| 49 | private const string InterpreterParameterName = "SymbolicExpressionTreeInterpreter";
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| 50 | #endregion
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| 51 |
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[10368] | 52 | #region parameter properties
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[10469] | 53 | public ILookupParameter<ISymbolicExpressionTree> SymbolicExpressionTreeParameter {
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| 54 | get { return (ILookupParameter<ISymbolicExpressionTree>)Parameters[SymbolicExpressionTreeParameterName]; }
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[10368] | 55 | }
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[10469] | 56 | public ILookupParameter<DoubleValue> QualityParameter {
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| 57 | get { return (ILookupParameter<DoubleValue>)Parameters[QualityParameterName]; }
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[10368] | 58 | }
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[10469] | 59 | public ILookupParameter<IDataAnalysisProblemData> ProblemDataParameter {
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| 60 | get { return (ILookupParameter<IDataAnalysisProblemData>)Parameters[ProblemDataParameterName]; }
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| 61 | }
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| 62 | public IValueParameter<ISymbolicDataAnalysisSolutionImpactValuesCalculator> ImpactValuesCalculatorParameter {
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| 63 | get { return (IValueParameter<ISymbolicDataAnalysisSolutionImpactValuesCalculator>)Parameters[ImpactValuesCalculatorParameterName]; }
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| 64 | }
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| 65 | public ILookupParameter<IntRange> FitnessCalculationPartitionParameter {
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| 66 | get { return (ILookupParameter<IntRange>)Parameters[FitnessCalculationPartitionParameterName]; }
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| 67 | }
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| 68 | public ILookupParameter<IntValue> PrunedSubtreesParameter {
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| 69 | get { return (ILookupParameter<IntValue>)Parameters[PrunedSubtreesParameterName]; }
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| 70 | }
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| 71 | public ILookupParameter<IntValue> PrunedTreesParameter {
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| 72 | get { return (ILookupParameter<IntValue>)Parameters[PrunedTreesParameterName]; }
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| 73 | }
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| 74 | public IFixedValueParameter<DoubleValue> NodeImpactThresholdParameter {
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| 75 | get { return (IFixedValueParameter<DoubleValue>)Parameters[NodeImpactThresholdParameterName]; }
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| 76 | }
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| 77 | public IFixedValueParameter<BoolValue> PruneOnlyZeroImpactNodesParameter {
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| 78 | get { return (IFixedValueParameter<BoolValue>)Parameters[PruneOnlyZeroImpactNodesParameterName]; }
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| 79 | }
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| 80 | public ILookupParameter<DoubleLimit> EstimationLimitsParameter {
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| 81 | get { return (ILookupParameter<DoubleLimit>)Parameters[EstimationLimitsParameterName]; }
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| 82 | }
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| 83 | public ILookupParameter<ISymbolicDataAnalysisExpressionTreeInterpreter> InterpreterParameter {
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| 84 | get { return (ILookupParameter<ISymbolicDataAnalysisExpressionTreeInterpreter>)Parameters[InterpreterParameterName]; }
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| 85 | }
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[10368] | 86 | #endregion
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[11025] | 87 |
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[10368] | 88 | #region properties
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[10469] | 89 | protected IDataAnalysisProblemData ProblemData { get { return ProblemDataParameter.ActualValue; } }
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| 90 | protected ISymbolicDataAnalysisSolutionImpactValuesCalculator ImpactValuesCalculator { get { return ImpactValuesCalculatorParameter.Value; } }
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| 91 | protected IntRange FitnessCalculationPartition { get { return FitnessCalculationPartitionParameter.ActualValue; } }
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[11025] | 92 | protected bool PruneOnlyZeroImpactNodes {
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| 93 | get { return PruneOnlyZeroImpactNodesParameter.Value.Value; }
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| 94 | set { PruneOnlyZeroImpactNodesParameter.Value.Value = value; }
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| 95 | }
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| 96 | protected double NodeImpactThreshold {
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| 97 | get { return NodeImpactThresholdParameter.Value.Value; }
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| 98 | set { NodeImpactThresholdParameter.Value.Value = value; }
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| 99 | }
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[10469] | 100 | protected ISymbolicExpressionTree SymbolicExpressionTree { get { return SymbolicExpressionTreeParameter.ActualValue; } }
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| 101 | protected DoubleValue Quality { get { return QualityParameter.ActualValue; } }
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| 102 | protected DoubleLimit EstimationLimits { get { return EstimationLimitsParameter.ActualValue; } }
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| 103 | protected ISymbolicDataAnalysisExpressionTreeInterpreter Interpreter { get { return InterpreterParameter.ActualValue; } }
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[10368] | 104 | #endregion
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[10417] | 105 |
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| 106 | [StorableConstructor]
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| 107 | protected SymbolicDataAnalysisExpressionPruningOperator(bool deserializing) : base(deserializing) { }
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| 108 | protected SymbolicDataAnalysisExpressionPruningOperator(SymbolicDataAnalysisExpressionPruningOperator original, Cloner cloner)
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[10469] | 109 | : base(original, cloner) { }
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[10368] | 110 |
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[12189] | 111 | protected SymbolicDataAnalysisExpressionPruningOperator(ISymbolicDataAnalysisSolutionImpactValuesCalculator impactValuesCalculator) {
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[10469] | 112 | #region add parameters
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| 113 | Parameters.Add(new LookupParameter<IDataAnalysisProblemData>(ProblemDataParameterName));
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| 114 | Parameters.Add(new LookupParameter<ISymbolicDataAnalysisModel>(SymbolicDataAnalysisModelParameterName));
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| 115 | Parameters.Add(new LookupParameter<IntRange>(FitnessCalculationPartitionParameterName));
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| 116 | Parameters.Add(new LookupParameter<IntValue>(PrunedSubtreesParameterName, "A counter of how many subtrees were replaced."));
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| 117 | Parameters.Add(new LookupParameter<IntValue>(PrunedTreesParameterName, "A counter of how many trees were pruned."));
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| 118 | Parameters.Add(new FixedValueParameter<BoolValue>(PruneOnlyZeroImpactNodesParameterName, "Specify whether or not only zero impact nodes should be pruned."));
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| 119 | Parameters.Add(new FixedValueParameter<DoubleValue>(NodeImpactThresholdParameterName, "Specifies an impact value threshold below which nodes should be pruned."));
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| 120 | Parameters.Add(new LookupParameter<DoubleLimit>(EstimationLimitsParameterName));
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| 121 | Parameters.Add(new LookupParameter<ISymbolicDataAnalysisExpressionTreeInterpreter>(InterpreterParameterName));
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| 122 | Parameters.Add(new LookupParameter<ISymbolicExpressionTree>(SymbolicExpressionTreeParameterName));
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| 123 | Parameters.Add(new LookupParameter<DoubleValue>(QualityParameterName));
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[12189] | 124 | Parameters.Add(new ValueParameter<ISymbolicDataAnalysisSolutionImpactValuesCalculator>(ImpactValuesCalculatorParameterName, impactValuesCalculator));
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[10469] | 125 | #endregion
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[10368] | 126 | }
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[11025] | 127 |
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[12189] | 128 | protected abstract ISymbolicDataAnalysisModel CreateModel(ISymbolicExpressionTree tree, ISymbolicDataAnalysisExpressionTreeInterpreter interpreter, IDataAnalysisProblemData problemData, DoubleLimit estimationLimits);
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[11025] | 129 |
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| 130 | protected abstract double Evaluate(IDataAnalysisModel model);
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| 131 |
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[10469] | 132 | public override IOperation Apply() {
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[12189] | 133 | var model = CreateModel(SymbolicExpressionTree, Interpreter, ProblemData, EstimationLimits);
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[10469] | 134 | var nodes = SymbolicExpressionTree.Root.GetSubtree(0).GetSubtree(0).IterateNodesPrefix().ToList();
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[11025] | 135 | var rows = Enumerable.Range(FitnessCalculationPartition.Start, FitnessCalculationPartition.Size);
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[10469] | 136 | var prunedSubtrees = 0;
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| 137 | var prunedTrees = 0;
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[10414] | 138 |
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[10469] | 139 | double quality = Evaluate(model);
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[10368] | 140 |
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[10469] | 141 | for (int i = 0; i < nodes.Count; ++i) {
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| 142 | var node = nodes[i];
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[10368] | 143 | if (node is ConstantTreeNode) continue;
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| 144 |
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[10469] | 145 | double impactValue, replacementValue;
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| 146 | ImpactValuesCalculator.CalculateImpactAndReplacementValues(model, node, ProblemData, rows, out impactValue, out replacementValue, quality);
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[10368] | 147 |
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[11025] | 148 | if (PruneOnlyZeroImpactNodes) {
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| 149 | if (!impactValue.IsAlmost(0.0)) continue;
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| 150 | } else if (NodeImpactThreshold < impactValue) {
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| 151 | continue;
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| 152 | }
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[10368] | 153 |
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[11025] | 154 | var constantNode = (ConstantTreeNode)node.Grammar.GetSymbol("Constant").CreateTreeNode();
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| 155 | constantNode.Value = replacementValue;
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| 156 |
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[10368] | 157 | ReplaceWithConstant(node, constantNode);
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[10469] | 158 | i += node.GetLength() - 1; // skip subtrees under the node that was folded
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[10368] | 159 |
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[10469] | 160 | quality -= impactValue;
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| 161 |
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[10368] | 162 | prunedSubtrees++;
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| 163 | }
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| 164 |
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[10469] | 165 | if (prunedSubtrees > 0) prunedTrees = 1;
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| 166 | PrunedSubtreesParameter.ActualValue = new IntValue(prunedSubtrees);
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| 167 | PrunedTreesParameter.ActualValue = new IntValue(prunedTrees);
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| 168 |
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[10368] | 169 | return base.Apply();
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| 170 | }
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[11025] | 171 |
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[12189] | 172 | public ISymbolicExpressionTree Prune(ISymbolicExpressionTree tree, ISymbolicDataAnalysisExpressionTreeInterpreter interpreter, IDataAnalysisProblemData problemData, DoubleLimit estimationLimits) {
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| 173 | var model = CreateModel((ISymbolicExpressionTree)tree.Clone(), Interpreter, ProblemData, EstimationLimits);
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| 174 | var nodes = SymbolicExpressionTree.Root.GetSubtree(0).GetSubtree(0).IterateNodesPrefix().ToList();
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| 175 | var rows = Enumerable.Range(FitnessCalculationPartition.Start, FitnessCalculationPartition.Size);
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| 176 |
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| 177 | double quality = Evaluate(model);
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| 178 |
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| 179 | for (int i = 0; i < nodes.Count; ++i) {
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| 180 | var node = nodes[i];
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| 181 | if (node is ConstantTreeNode) continue;
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| 182 |
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| 183 | double impactValue, replacementValue;
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| 184 | ImpactValuesCalculator.CalculateImpactAndReplacementValues(model, node, ProblemData, rows, out impactValue, out replacementValue, quality);
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| 185 |
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| 186 | if (PruneOnlyZeroImpactNodes) {
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| 187 | if (!impactValue.IsAlmost(0.0)) continue;
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| 188 | } else if (NodeImpactThreshold < impactValue) {
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| 189 | continue;
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| 190 | }
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| 191 |
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| 192 | var constantNode = (ConstantTreeNode)node.Grammar.GetSymbol("Constant").CreateTreeNode();
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| 193 | constantNode.Value = replacementValue;
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| 194 |
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| 195 | ReplaceWithConstant(node, constantNode);
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| 196 | i += node.GetLength() - 1; // skip subtrees under the node that was folded
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| 197 |
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| 198 | quality -= impactValue;
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| 199 | }
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| 200 | return model.SymbolicExpressionTree;
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| 201 | }
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| 202 |
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| 203 | protected static void ReplaceWithConstant(ISymbolicExpressionTreeNode original, ISymbolicExpressionTreeNode replacement) {
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[10368] | 204 | var parent = original.Parent;
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| 205 | var i = parent.IndexOfSubtree(original);
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| 206 | parent.RemoveSubtree(i);
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| 207 | parent.InsertSubtree(i, replacement);
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| 208 | }
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| 209 | }
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| 210 | }
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