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source: trunk/sources/HeuristicLab.Problems.DataAnalysis.Regression/3.3/Symbolic/Analyzers/BestSymbolicRegressionSolutionAnalyzer.cs @ 4468

Last change on this file since 4468 was 4468, checked in by mkommend, 14 years ago

Preparation for cross validation - removed the test samples from the trainining samples and added ValidationPercentage parameter (ticket #1199).

File size: 7.7 KB
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1#region License Information
2/* HeuristicLab
3 * Copyright (C) 2002-2010 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
4 *
5 * This file is part of HeuristicLab.
6 *
7 * HeuristicLab is free software: you can redistribute it and/or modify
8 * it under the terms of the GNU General Public License as published by
9 * the Free Software Foundation, either version 3 of the License, or
10 * (at your option) any later version.
11 *
12 * HeuristicLab is distributed in the hope that it will be useful,
13 * but WITHOUT ANY WARRANTY; without even the implied warranty of
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
15 * GNU General Public License for more details.
16 *
17 * You should have received a copy of the GNU General Public License
18 * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
19 */
20#endregion
21
22using System.Linq;
23using HeuristicLab.Analysis;
24using HeuristicLab.Core;
25using HeuristicLab.Data;
26using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
27using HeuristicLab.Optimization;
28using HeuristicLab.Parameters;
29using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
30using HeuristicLab.Problems.DataAnalysis.Symbolic;
31
32namespace HeuristicLab.Problems.DataAnalysis.Regression.Symbolic.Analyzers {
33  [Item("BestSymbolicRegressionSolutionAnalyzer", "An operator for analyzing the best solution of symbolic regression problems given in symbolic expression tree encoding.")]
34  [StorableClass]
35  public sealed class BestSymbolicRegressionSolutionAnalyzer : RegressionSolutionAnalyzer, ISymbolicRegressionAnalyzer {
36    private const string SymbolicExpressionTreeParameterName = "SymbolicExpressionTree";
37    private const string SymbolicExpressionTreeInterpreterParameterName = "SymbolicExpressionTreeInterpreter";
38    private const string BestSolutionInputvariableCountResultName = "Variables used by best solution";
39    private const string VariableFrequenciesParameterName = "VariableFrequencies";
40    private const string VariableImpactsResultName = "Integrated variable frequencies";
41    private const string BestSolutionParameterName = "BestSolution";
42
43    #region parameter properties
44    public ScopeTreeLookupParameter<SymbolicExpressionTree> SymbolicExpressionTreeParameter {
45      get { return (ScopeTreeLookupParameter<SymbolicExpressionTree>)Parameters[SymbolicExpressionTreeParameterName]; }
46    }
47    public IValueLookupParameter<ISymbolicExpressionTreeInterpreter> SymbolicExpressionTreeInterpreterParameter {
48      get { return (IValueLookupParameter<ISymbolicExpressionTreeInterpreter>)Parameters[SymbolicExpressionTreeInterpreterParameterName]; }
49    }
50    public ILookupParameter<SymbolicRegressionSolution> BestSolutionParameter {
51      get { return (ILookupParameter<SymbolicRegressionSolution>)Parameters[BestSolutionParameterName]; }
52    }
53    public ILookupParameter<DataTable> VariableFrequenciesParameter {
54      get { return (ILookupParameter<DataTable>)Parameters[VariableFrequenciesParameterName]; }
55    }
56    #endregion
57    #region properties
58    public ISymbolicExpressionTreeInterpreter SymbolicExpressionTreeInterpreter {
59      get { return SymbolicExpressionTreeInterpreterParameter.ActualValue; }
60    }
61    public ItemArray<SymbolicExpressionTree> SymbolicExpressionTree {
62      get { return SymbolicExpressionTreeParameter.ActualValue; }
63    }
64    public DataTable VariableFrequencies {
65      get { return VariableFrequenciesParameter.ActualValue; }
66    }
67    #endregion
68
69    public BestSymbolicRegressionSolutionAnalyzer()
70      : base() {
71      Parameters.Add(new ScopeTreeLookupParameter<SymbolicExpressionTree>(SymbolicExpressionTreeParameterName, "The symbolic expression trees to analyze."));
72      Parameters.Add(new ValueLookupParameter<ISymbolicExpressionTreeInterpreter>(SymbolicExpressionTreeInterpreterParameterName, "The interpreter that should be used for the analysis of symbolic expression trees."));
73      Parameters.Add(new LookupParameter<DataTable>(VariableFrequenciesParameterName, "The variable frequencies table to use for the calculation of variable impacts"));
74      Parameters.Add(new LookupParameter<SymbolicRegressionSolution>(BestSolutionParameterName, "The best symbolic regression solution."));
75    }
76
77    [StorableHook(HookType.AfterDeserialization)]
78    private void Initialize() {
79      if (!Parameters.ContainsKey(VariableFrequenciesParameterName)) {
80        Parameters.Add(new LookupParameter<DataTable>(VariableFrequenciesParameterName, "The variable frequencies table to use for the calculation of variable impacts"));
81      }
82    }
83
84    protected override DataAnalysisSolution UpdateBestSolution() {
85      double upperEstimationLimit = UpperEstimationLimit != null ? UpperEstimationLimit.Value : double.PositiveInfinity;
86      double lowerEstimationLimit = LowerEstimationLimit != null ? LowerEstimationLimit.Value : double.NegativeInfinity;
87
88      int i = Quality.Select((x, index) => new { index, x.Value }).OrderBy(x => x.Value).First().index;
89
90      if (BestSolutionQualityParameter.ActualValue == null || BestSolutionQualityParameter.ActualValue.Value > Quality[i].Value) {
91        var model = new SymbolicRegressionModel((ISymbolicExpressionTreeInterpreter)SymbolicExpressionTreeInterpreter.Clone(),
92          SymbolicExpressionTree[i]);
93        DataAnalysisProblemData problemDataClone = (DataAnalysisProblemData)ProblemData.Clone();
94        var solution = new SymbolicRegressionSolution(problemDataClone, model, lowerEstimationLimit, upperEstimationLimit);
95        solution.Name = BestSolutionParameterName;
96        solution.Description = "Best solution on validation partition found over the whole run.";
97        BestSolutionParameter.ActualValue = solution;
98        BestSolutionQualityParameter.ActualValue = Quality[i];
99        BestSymbolicRegressionSolutionAnalyzer.UpdateSymbolicRegressionBestSolutionResults(solution, problemDataClone, Results, VariableFrequencies);
100      }
101      return BestSolutionParameter.ActualValue;
102    }
103
104    public static void UpdateBestSolutionResults(SymbolicRegressionSolution bestSolution, DataAnalysisProblemData problemData, ResultCollection results, IntValue currentGeneration, DataTable variableFrequencies) {
105      RegressionSolutionAnalyzer.UpdateBestSolutionResults(bestSolution, problemData, results, currentGeneration);
106      UpdateSymbolicRegressionBestSolutionResults(bestSolution, problemData, results, variableFrequencies);
107    }
108
109    private static void UpdateSymbolicRegressionBestSolutionResults(SymbolicRegressionSolution bestSolution, DataAnalysisProblemData problemData, ResultCollection results, DataTable variableFrequencies) {
110      if (results.ContainsKey(BestSolutionInputvariableCountResultName)) {
111        results[BestSolutionInputvariableCountResultName].Value = new IntValue(bestSolution.Model.InputVariables.Count());
112        results[VariableImpactsResultName].Value = CalculateVariableImpacts(variableFrequencies);
113      } else {
114        results.Add(new Result(BestSolutionInputvariableCountResultName, new IntValue(bestSolution.Model.InputVariables.Count())));
115        results.Add(new Result(VariableImpactsResultName, CalculateVariableImpacts(variableFrequencies)));
116      }
117    }
118
119
120    private static DoubleMatrix CalculateVariableImpacts(DataTable variableFrequencies) {
121      if (variableFrequencies != null) {
122        var impacts = new DoubleMatrix(variableFrequencies.Rows.Count, 1, new string[] { "Impact" }, variableFrequencies.Rows.Select(x => x.Name));
123        impacts.SortableView = true;
124        int rowIndex = 0;
125        foreach (var dataRow in variableFrequencies.Rows) {
126          string variableName = dataRow.Name;
127          impacts[rowIndex++, 0] = dataRow.Values.Average();
128        }
129        return impacts;
130      } else return new DoubleMatrix(1, 1);
131    }
132  }
133}
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