[3742] | 1 | #region License Information
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| 2 | /* HeuristicLab
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[12012] | 3 | * Copyright (C) 2002-2015 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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[3742] | 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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[4068] | 22 | using System;
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[3742] | 23 | using System.Collections.Generic;
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[4068] | 24 | using System.IO;
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| 25 | using System.IO.Compression;
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| 26 | using System.Linq;
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[1454] | 27 | using System.Text;
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[4068] | 28 | using HeuristicLab.Persistence.Core;
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| 29 | using HeuristicLab.Persistence.Core.Tokens;
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[1454] | 30 | using HeuristicLab.Persistence.Interfaces;
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[4068] | 31 | using HeuristicLab.Tracing;
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[1454] | 32 |
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[1615] | 33 | namespace HeuristicLab.Persistence.Default.Xml {
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[1454] | 34 |
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[3004] | 35 |
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| 36 | /// <summary>
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| 37 | /// Main entry point of persistence to XML. Use the static methods to serialize
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| 38 | /// to a file or to a stream.
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| 39 | /// </summary>
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[1564] | 40 | public class XmlGenerator : GeneratorBase<string> {
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[1566] | 41 |
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[3935] | 42 | protected int depth;
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| 43 | protected int Depth {
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[1570] | 44 | get {
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| 45 | return depth;
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| 46 | }
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| 47 | set {
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| 48 | depth = value;
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| 49 | prefix = new string(' ', depth * 2);
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| 50 | }
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| 51 | }
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[1454] | 52 |
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[3935] | 53 | protected string prefix;
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[1570] | 54 |
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| 55 |
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[3016] | 56 | /// <summary>
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| 57 | /// Initializes a new instance of the <see cref="XmlGenerator"/> class.
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| 58 | /// </summary>
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[1454] | 59 | public XmlGenerator() {
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[1570] | 60 | Depth = 0;
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[1454] | 61 | }
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| 62 |
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[3935] | 63 | protected enum NodeType { Start, End, Inline } ;
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[1454] | 64 |
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[3937] | 65 | protected static void AddXmlTagContent(StringBuilder sb, string name, Dictionary<string, string> attributes) {
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[1566] | 66 | sb.Append(name);
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[1454] | 67 | foreach (var attribute in attributes) {
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| 68 | if (attribute.Value != null && !string.IsNullOrEmpty(attribute.Value.ToString())) {
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[1570] | 69 | sb.Append(' ');
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[1454] | 70 | sb.Append(attribute.Key);
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| 71 | sb.Append("=\"");
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| 72 | sb.Append(attribute.Value);
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| 73 | sb.Append('"');
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| 74 | }
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| 75 | }
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[1570] | 76 | }
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| 77 |
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[3937] | 78 | protected static int AttributeLength(Dictionary<string, string> attributes) {
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| 79 | return attributes
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| 80 | .Where(kvp => !string.IsNullOrEmpty(kvp.Key) && !string.IsNullOrEmpty(kvp.Value))
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| 81 | .Select(kvp => kvp.Key.Length + kvp.Value.Length + 4).Sum();
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| 82 | }
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| 83 |
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| 84 | protected static void AddXmlStartTag(StringBuilder sb, string name, Dictionary<string, string> attributes) {
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[1570] | 85 | sb.Append('<');
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| 86 | AddXmlTagContent(sb, name, attributes);
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| 87 | sb.Append('>');
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| 88 | }
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| 89 |
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[3937] | 90 | protected static void AddXmlInlineTag(StringBuilder sb, string name, Dictionary<string, string> attributes) {
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[1570] | 91 | sb.Append('<');
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| 92 | AddXmlTagContent(sb, name, attributes);
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| 93 | sb.Append("/>");
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| 94 | }
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| 95 |
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[3935] | 96 | protected static void AddXmlEndTag(StringBuilder sb, string name) {
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[1570] | 97 | sb.Append("</");
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| 98 | sb.Append(name);
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[1454] | 99 | sb.Append(">");
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[1570] | 100 | }
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| 101 |
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[3937] | 102 | protected string CreateNodeStart(string name, Dictionary<string, string> attributes) {
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| 103 | StringBuilder sb = new StringBuilder(prefix.Length + name.Length + 4
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| 104 | + AttributeLength(attributes));
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[1570] | 105 | sb.Append(prefix);
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| 106 | Depth += 1;
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| 107 | AddXmlStartTag(sb, name, attributes);
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| 108 | sb.Append("\r\n");
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[1566] | 109 | return sb.ToString();
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[1454] | 110 | }
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| 111 |
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[3937] | 112 | private static Dictionary<string, string> emptyDict = new Dictionary<string, string>();
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[3935] | 113 | protected string CreateNodeStart(string name) {
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[3937] | 114 | return CreateNodeStart(name, emptyDict);
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[1454] | 115 | }
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| 116 |
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[3935] | 117 | protected string CreateNodeEnd(string name) {
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[1570] | 118 | Depth -= 1;
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[3937] | 119 | StringBuilder sb = new StringBuilder(prefix.Length + name.Length + 5);
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[1570] | 120 | sb.Append(prefix);
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| 121 | AddXmlEndTag(sb, name);
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| 122 | sb.Append("\r\n");
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| 123 | return sb.ToString();
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| 124 | }
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| 125 |
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[3937] | 126 | protected string CreateNode(string name, Dictionary<string, string> attributes) {
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| 127 | StringBuilder sb = new StringBuilder(prefix.Length + name.Length + 5
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| 128 | + AttributeLength(attributes));
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[1570] | 129 | sb.Append(prefix);
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| 130 | AddXmlInlineTag(sb, name, attributes);
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| 131 | sb.Append("\r\n");
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| 132 | return sb.ToString();
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| 133 | }
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| 134 |
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[3937] | 135 | protected string CreateNode(string name, Dictionary<string, string> attributes, string content) {
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[3944] | 136 | StringBuilder sb = new StringBuilder(
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| 137 | prefix.Length + name.Length + AttributeLength(attributes) + 2
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| 138 | + content.Length + name.Length + 5);
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[1570] | 139 | sb.Append(prefix);
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| 140 | AddXmlStartTag(sb, name, attributes);
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| 141 | sb.Append(content);
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| 142 | sb.Append("</").Append(name).Append(">\r\n");
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| 143 | return sb.ToString();
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| 144 | }
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| 145 |
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[3036] | 146 | /// <summary>
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| 147 | /// Formats the specified begin token.
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| 148 | /// </summary>
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| 149 | /// <param name="beginToken">The begin token.</param>
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| 150 | /// <returns>The token in serialized form.</returns>
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[1566] | 151 | protected override string Format(BeginToken beginToken) {
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[3937] | 152 | var dict = new Dictionary<string, string> {
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[1570] | 153 | {"name", beginToken.Name},
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[3937] | 154 | {"typeId", beginToken.TypeId.ToString()},
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| 155 | {"id", beginToken.Id.ToString()}};
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[3005] | 156 | AddTypeInfo(beginToken.TypeId, dict);
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| 157 | return CreateNodeStart(XmlStringConstants.COMPOSITE, dict);
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[3944] | 158 |
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[1454] | 159 | }
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| 160 |
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[3937] | 161 | protected void AddTypeInfo(int typeId, Dictionary<string, string> dict) {
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[3005] | 162 | if (lastTypeToken != null) {
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| 163 | if (typeId == lastTypeToken.Id) {
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| 164 | dict.Add("typeName", lastTypeToken.TypeName);
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| 165 | dict.Add("serializer", lastTypeToken.Serializer);
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| 166 | lastTypeToken = null;
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| 167 | } else {
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| 168 | FlushTypeToken();
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| 169 | }
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| 170 | }
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| 171 | }
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| 172 |
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[3036] | 173 | /// <summary>
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| 174 | /// Formats the specified end token.
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| 175 | /// </summary>
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| 176 | /// <param name="endToken">The end token.</param>
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| 177 | /// <returns>The token in serialized form.</returns>
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[1566] | 178 | protected override string Format(EndToken endToken) {
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[1612] | 179 | return CreateNodeEnd(XmlStringConstants.COMPOSITE);
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[1454] | 180 | }
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| 181 |
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[3036] | 182 | /// <summary>
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| 183 | /// Formats the specified data token.
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| 184 | /// </summary>
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| 185 | /// <param name="dataToken">The data token.</param>
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| 186 | /// <returns>The token in serialized form.</returns>
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[1566] | 187 | protected override string Format(PrimitiveToken dataToken) {
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[3937] | 188 | var dict = new Dictionary<string, string> {
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| 189 | {"typeId", dataToken.TypeId.ToString()},
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[1454] | 190 | {"name", dataToken.Name},
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[3937] | 191 | {"id", dataToken.Id.ToString()}};
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[3005] | 192 | AddTypeInfo(dataToken.TypeId, dict);
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| 193 | return CreateNode(XmlStringConstants.PRIMITIVE, dict,
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[1570] | 194 | ((XmlString)dataToken.SerialData).Data);
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[1454] | 195 | }
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| 196 |
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[3036] | 197 | /// <summary>
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| 198 | /// Formats the specified ref token.
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| 199 | /// </summary>
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| 200 | /// <param name="refToken">The ref token.</param>
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| 201 | /// <returns>The token in serialized form.</returns>
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[1566] | 202 | protected override string Format(ReferenceToken refToken) {
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[1612] | 203 | return CreateNode(XmlStringConstants.REFERENCE,
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[3937] | 204 | new Dictionary<string, string> {
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| 205 | {"ref", refToken.Id.ToString()},
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[1570] | 206 | {"name", refToken.Name}});
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[1454] | 207 | }
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| 208 |
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[3036] | 209 | /// <summary>
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| 210 | /// Formats the specified null ref token.
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| 211 | /// </summary>
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| 212 | /// <param name="nullRefToken">The null ref token.</param>
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| 213 | /// <returns>The token in serialized form.</returns>
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[1566] | 214 | protected override string Format(NullReferenceToken nullRefToken) {
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[1612] | 215 | return CreateNode(XmlStringConstants.NULL,
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[3937] | 216 | new Dictionary<string, string>{
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[1570] | 217 | {"name", nullRefToken.Name}});
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[1454] | 218 | }
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| 219 |
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[3036] | 220 | /// <summary>
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| 221 | /// Formats the specified meta info begin token.
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| 222 | /// </summary>
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| 223 | /// <param name="metaInfoBeginToken">The meta info begin token.</param>
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| 224 | /// <returns>The token in serialized form.</returns>
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[1553] | 225 | protected override string Format(MetaInfoBeginToken metaInfoBeginToken) {
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[1612] | 226 | return CreateNodeStart(XmlStringConstants.METAINFO);
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[1553] | 227 | }
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| 228 |
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[3036] | 229 | /// <summary>
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| 230 | /// Formats the specified meta info end token.
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| 231 | /// </summary>
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| 232 | /// <param name="metaInfoEndToken">The meta info end token.</param>
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| 233 | /// <returns>The token in serialized form.</returns>
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[1553] | 234 | protected override string Format(MetaInfoEndToken metaInfoEndToken) {
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[1612] | 235 | return CreateNodeEnd(XmlStringConstants.METAINFO);
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[1553] | 236 | }
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| 237 |
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[3935] | 238 | protected TypeToken lastTypeToken;
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[3036] | 239 | /// <summary>
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| 240 | /// Formats the specified token.
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| 241 | /// </summary>
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| 242 | /// <param name="token">The token.</param>
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| 243 | /// <returns>The token in serialized form.</returns>
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[3005] | 244 | protected override string Format(TypeToken token) {
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| 245 | lastTypeToken = token;
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| 246 | return "";
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| 247 | }
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| 248 |
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[3935] | 249 | protected string FlushTypeToken() {
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[3005] | 250 | if (lastTypeToken == null)
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| 251 | return "";
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| 252 | try {
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| 253 | return CreateNode(XmlStringConstants.TYPE,
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[3937] | 254 | new Dictionary<string, string> {
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| 255 | {"id", lastTypeToken.Id.ToString()},
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[3005] | 256 | {"typeName", lastTypeToken.TypeName },
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| 257 | {"serializer", lastTypeToken.Serializer }});
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[4068] | 258 | }
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| 259 | finally {
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[3005] | 260 | lastTypeToken = null;
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| 261 | }
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| 262 | }
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| 263 |
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[3028] | 264 | /// <summary>
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| 265 | /// Formats the specified type cache.
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| 266 | /// </summary>
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| 267 | /// <param name="typeCache">The type cache.</param>
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| 268 | /// <returns>An enumerable of formatted type cache tags.</returns>
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[1454] | 269 | public IEnumerable<string> Format(List<TypeMapping> typeCache) {
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[1612] | 270 | yield return CreateNodeStart(XmlStringConstants.TYPECACHE);
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[1454] | 271 | foreach (var mapping in typeCache)
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[1570] | 272 | yield return CreateNode(
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[1612] | 273 | XmlStringConstants.TYPE,
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[1570] | 274 | mapping.GetDict());
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[1612] | 275 | yield return CreateNodeEnd(XmlStringConstants.TYPECACHE);
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[1454] | 276 | }
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| 277 |
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[3004] | 278 | /// <summary>
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| 279 | /// Serialize an object into a file.
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[3016] | 280 | /// The XML configuration is obtained from the <c>ConfigurationService</c>.
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[3004] | 281 | /// The file is actually a ZIP file.
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| 282 | /// Compression level is set to 5 and needed assemblies are not included.
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[3036] | 283 | /// </summary>
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| 284 | /// <param name="o">The object.</param>
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| 285 | /// <param name="filename">The filename.</param>
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[1566] | 286 | public static void Serialize(object o, string filename) {
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[11650] | 287 | Serialize(o, filename, ConfigurationService.Instance.GetConfiguration(new XmlFormat()), false, CompressionLevel.Optimal);
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[1454] | 288 | }
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| 289 |
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[3004] | 290 | /// <summary>
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| 291 | /// Serialize an object into a file.
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[3016] | 292 | /// The XML configuration is obtained from the <c>ConfigurationService</c>.
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[3004] | 293 | /// Needed assemblies are not included.
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| 294 | /// </summary>
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[3028] | 295 | /// <param name="o">The object.</param>
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| 296 | /// <param name="filename">The filename.</param>
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[3004] | 297 | /// <param name="compression">ZIP file compression level</param>
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[11650] | 298 | public static void Serialize(object o, string filename, CompressionLevel compression) {
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[1892] | 299 | Serialize(o, filename, ConfigurationService.Instance.GetConfiguration(new XmlFormat()), false, compression);
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| 300 | }
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| 301 |
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[3028] | 302 | /// <summary>
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| 303 | /// Serializes the specified object into a file.
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| 304 | /// Needed assemblies are not included, ZIP compression level is set to 5.
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| 305 | /// </summary>
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| 306 | /// <param name="obj">The object.</param>
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| 307 | /// <param name="filename">The filename.</param>
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| 308 | /// <param name="config">The configuration.</param>
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[1466] | 309 | public static void Serialize(object obj, string filename, Configuration config) {
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[11650] | 310 | Serialize(obj, filename, config, false, CompressionLevel.Optimal);
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[1797] | 311 | }
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| 312 |
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[12455] | 313 | private static void Serialize(object obj, Stream stream, Configuration config, bool includeAssemblies
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| 314 | , CompressionLevel compression) {
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| 315 | Serializer serializer = new Serializer(obj, config);
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| 316 | Serialize(stream, includeAssemblies, compression, serializer);
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| 317 | }
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| 318 |
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| 319 | private static void Serialize(Stream stream, bool includeAssemblies, CompressionLevel compression, Serializer serializer) {
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| 320 | try {
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| 321 | DateTime start = DateTime.Now;
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| 322 | serializer.InterleaveTypeInformation = false;
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| 323 | XmlGenerator generator = new XmlGenerator();
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| 324 | using (ZipArchive zipArchive = new ZipArchive(stream, ZipArchiveMode.Create)) {
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| 325 | ZipArchiveEntry entry = zipArchive.CreateEntry("data.xml", compression);
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| 326 | using (StreamWriter writer = new StreamWriter(entry.Open())) {
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| 327 | foreach (ISerializationToken token in serializer) {
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| 328 | string line = generator.Format(token);
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| 329 | writer.Write(line);
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| 330 | }
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| 331 | }
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| 332 | entry = zipArchive.CreateEntry("typecache.xml", compression);
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| 333 | using (StreamWriter writer = new StreamWriter(entry.Open())) {
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| 334 | foreach (string line in generator.Format(serializer.TypeCache)) {
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| 335 | writer.Write(line);
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| 336 | }
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| 337 | }
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| 338 | if (includeAssemblies) {
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| 339 | foreach (string name in serializer.RequiredFiles) {
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| 340 | Uri uri = new Uri(name);
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| 341 | if (!uri.IsFile) {
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| 342 | Logger.Warn("cannot read non-local files");
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| 343 | continue;
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| 344 | }
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| 345 | entry = zipArchive.CreateEntry(Path.GetFileName(uri.PathAndQuery), compression);
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| 346 | using (BinaryWriter bw = new BinaryWriter(entry.Open())) {
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| 347 | using (FileStream reader = File.OpenRead(uri.PathAndQuery)) {
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| 348 | byte[] buffer = new byte[1024 * 1024];
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| 349 | while (true) {
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| 350 | int bytesRead = reader.Read(buffer, 0, 1024 * 1024);
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| 351 | if (bytesRead == 0)
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| 352 | break;
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| 353 | bw.Write(buffer, 0, bytesRead);
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| 354 | }
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| 355 | }
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| 356 | }
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| 357 | }
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| 358 | }
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| 359 | }
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| 360 | Logger.Info(String.Format("serialization took {0} seconds with compression level {1}",
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| 361 | (DateTime.Now - start).TotalSeconds, compression));
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| 362 | }
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| 363 | catch (Exception) {
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| 364 | Logger.Warn("Exception caught, no data has been serialized.");
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| 365 | throw;
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| 366 | }
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| 367 | }
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| 368 |
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[3028] | 369 | /// <summary>
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| 370 | /// Serializes the specified object into a file.
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| 371 | /// </summary>
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| 372 | /// <param name="obj">The object.</param>
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| 373 | /// <param name="filename">The filename.</param>
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| 374 | /// <param name="config">The configuration.</param>
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| 375 | /// <param name="includeAssemblies">if set to <c>true</c> include needed assemblies.</param>
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| 376 | /// <param name="compression">The ZIP compression level.</param>
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[11650] | 377 | public static void Serialize(object obj, string filename, Configuration config, bool includeAssemblies, CompressionLevel compression) {
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[1625] | 378 | try {
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[1892] | 379 | string tempfile = Path.GetTempFileName();
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[12455] | 380 |
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[2037] | 381 | using (FileStream stream = File.Create(tempfile)) {
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[12455] | 382 | Serialize(obj, stream, config, includeAssemblies, compression);
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[2037] | 383 | }
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[12455] | 384 |
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[1733] | 385 | File.Copy(tempfile, filename, true);
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| 386 | File.Delete(tempfile);
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[4068] | 387 | }
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| 388 | catch (Exception) {
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[1733] | 389 | Logger.Warn("Exception caught, no data has been written.");
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| 390 | throw;
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| 391 | }
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| 392 | }
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| 393 |
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[3028] | 394 | /// <summary>
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| 395 | /// Serializes the specified object into a stream using the <see cref="XmlFormat"/>
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| 396 | /// obtained from the <see cref="ConfigurationService"/>.
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| 397 | /// </summary>
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| 398 | /// <param name="obj">The object.</param>
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| 399 | /// <param name="stream">The stream.</param>
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[12455] | 400 | /// <param name="useZip">If true, uses zip for compression, otherwise gzip.</param>
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| 401 | public static void Serialize(object obj, Stream stream, bool useZip = false) {
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| 402 | Serialize(obj, stream, ConfigurationService.Instance.GetConfiguration(new XmlFormat()), useZip);
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[3005] | 403 | }
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[1797] | 404 |
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[3005] | 405 |
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[3028] | 406 | /// <summary>
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| 407 | /// Serializes the specified object into a stream.
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| 408 | /// </summary>
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| 409 | /// <param name="obj">The object.</param>
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| 410 | /// <param name="stream">The stream.</param>
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| 411 | /// <param name="config">The configuration.</param>
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[12455] | 412 | /// <param name="useZip">If true, uses zip for compression, otherwise gzip.</param>
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| 413 | public static void Serialize(object obj, Stream stream, Configuration config, bool useZip = false) {
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| 414 | Serialize(obj, stream, config, false, useZip);
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[1797] | 415 | }
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[3005] | 416 |
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[3028] | 417 | /// <summary>
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| 418 | /// Serializes the specified object into a stream.
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| 419 | /// </summary>
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| 420 | /// <param name="obj">The object.</param>
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| 421 | /// <param name="stream">The stream.</param>
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| 422 | /// <param name="config">The configuration.</param>
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| 423 | /// <param name="includeAssemblies">if set to <c>true</c> include need assemblies.</param>
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[12455] | 424 | /// <param name="useZip">If true, uses zip for compression, otherwise gzip.</param>
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| 425 | public static void Serialize(object obj, Stream stream, Configuration config, bool includeAssemblies, bool useZip = false) {
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[1733] | 426 | try {
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[5403] | 427 | Serializer serializer = new Serializer(obj, config);
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[12455] | 428 | if (useZip) {
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| 429 | Serialize(obj, stream, config, includeAssemblies, CompressionLevel.Optimal);
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| 430 | } else {
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| 431 | Serialize(stream, serializer);
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| 432 | }
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[11650] | 433 | }
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| 434 | catch (PersistenceException) {
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[5403] | 435 | throw;
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[11650] | 436 | }
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| 437 | catch (Exception e) {
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[5403] | 438 | throw new PersistenceException("Unexpected exception during Serialization.", e);
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[4068] | 439 | }
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[5403] | 440 | }
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| 441 |
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| 442 | /// <summary>
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| 443 | /// Serializes the specified object into a stream.
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| 444 | /// </summary>
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| 445 | /// <param name="obj">The object.</param>
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| 446 | /// <param name="stream">The stream.</param>
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| 447 | /// <param name="config">The configuration.</param>
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| 448 | /// <param name="includeAssemblies">if set to <c>true</c> include need assemblies.</param>
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| 449 | /// <param name="types">The list of all serialized types.</param>
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[12455] | 450 | /// <param name="useZip">If true, uses zip for compression, otherwise gzip.</param>
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| 451 | public static void Serialize(object obj, Stream stream, Configuration config, bool includeAssemblies, out IEnumerable<Type> types, bool useZip = false) {
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[5403] | 452 | try {
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| 453 | Serializer serializer = new Serializer(obj, config);
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[12455] | 454 | if (useZip) {
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| 455 | Serialize(stream, includeAssemblies, CompressionLevel.Optimal, serializer);
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| 456 | } else {
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| 457 | Serialize(stream, serializer);
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| 458 | }
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[5403] | 459 | types = serializer.SerializedTypes;
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[11650] | 460 | }
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| 461 | catch (PersistenceException) {
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[1625] | 462 | throw;
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[11650] | 463 | }
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| 464 | catch (Exception e) {
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[1625] | 465 | throw new PersistenceException("Unexpected exception during Serialization.", e);
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[3005] | 466 | }
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[1454] | 467 | }
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[5403] | 468 |
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| 469 | private static void Serialize(Stream stream, Serializer serializer) {
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| 470 | using (StreamWriter writer = new StreamWriter(new GZipStream(stream, CompressionMode.Compress))) {
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| 471 | serializer.InterleaveTypeInformation = true;
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| 472 | XmlGenerator generator = new XmlGenerator();
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| 473 | foreach (ISerializationToken token in serializer) {
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| 474 | string line = generator.Format(token);
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| 475 | writer.Write(line);
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| 476 | }
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| 477 | writer.Flush();
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| 478 | }
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| 479 | }
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[1454] | 480 | }
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| 481 | } |
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