1 | #region License Information
|
---|
2 | /* HeuristicLab
|
---|
3 | * Copyright (C) 2002-2008 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
|
---|
4 | *
|
---|
5 | * This file is part of HeuristicLab.
|
---|
6 | *
|
---|
7 | * HeuristicLab is free software: you can redistribute it and/or modify
|
---|
8 | * it under the terms of the GNU General Public License as published by
|
---|
9 | * the Free Software Foundation, either version 3 of the License, or
|
---|
10 | * (at your option) any later version.
|
---|
11 | *
|
---|
12 | * HeuristicLab is distributed in the hope that it will be useful,
|
---|
13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
|
---|
14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
---|
15 | * GNU General Public License for more details.
|
---|
16 | *
|
---|
17 | * You should have received a copy of the GNU General Public License
|
---|
18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
|
---|
19 | */
|
---|
20 | #endregion
|
---|
21 |
|
---|
22 | using HeuristicLab.Core;
|
---|
23 | using HeuristicLab.Data;
|
---|
24 | using HeuristicLab.Random;
|
---|
25 | using System;
|
---|
26 | using System.Linq;
|
---|
27 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
|
---|
28 | using System.Collections.Generic;
|
---|
29 |
|
---|
30 | namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
|
---|
31 | [StorableClass]
|
---|
32 | [Item("ProbabilisticTreeCreator", "An operator that creates new symbolic expression trees with uniformly distributed size")]
|
---|
33 | public class ProbabilisticTreeCreator : SymbolicExpressionTreeCreator {
|
---|
34 | private const int MAX_TRIES = 100;
|
---|
35 | public ProbabilisticTreeCreator()
|
---|
36 | : base() {
|
---|
37 | }
|
---|
38 |
|
---|
39 | protected override SymbolicExpressionTree Create(IRandom random, ISymbolicExpressionGrammar grammar, IntValue maxTreeSize, IntValue maxTreeHeight) {
|
---|
40 | return Apply(random, grammar, maxTreeSize.Value, maxTreeHeight.Value);
|
---|
41 | }
|
---|
42 |
|
---|
43 | public SymbolicExpressionTree Apply(IRandom random, ISymbolicExpressionGrammar grammar, int maxTreeSize, int maxTreeHeight) {
|
---|
44 | // tree size is limited by the grammar and by the explicit size constraints
|
---|
45 | int allowedMinSize = grammar.MinimalExpressionLength(grammar.StartSymbol);
|
---|
46 | int allowedMaxSize = Math.Min(maxTreeSize, grammar.MaximalExpressionLength(grammar.StartSymbol));
|
---|
47 | // select a target tree size uniformly in the possible range (as determined by explicit limits and limits of the grammar)
|
---|
48 | int treeSize = random.Next(allowedMinSize, allowedMaxSize);
|
---|
49 | SymbolicExpressionTree tree = new SymbolicExpressionTree();
|
---|
50 | int tries = 0;
|
---|
51 | do {
|
---|
52 | try {
|
---|
53 | tree.Root = PTC2(random, grammar, grammar.StartSymbol, treeSize+1, maxTreeHeight+1);
|
---|
54 | //// determine possible root symbols to create a tree of the target size
|
---|
55 | //var possibleRootSymbols = from symbol in grammar.AllowedSymbols(grammar.StartSymbol, 0)
|
---|
56 | // where treeSize <= grammar.MaximalExpressionLength(symbol)
|
---|
57 | // where treeSize >= grammar.MinimalExpressionLength(symbol)
|
---|
58 | // select symbol;
|
---|
59 | //Symbol rootSymbol = SelectRandomSymbol(random, possibleRootSymbols);
|
---|
60 | //tree.Root = PTC2(random, grammar, rootSymbol, treeSize, maxTreeHeight);
|
---|
61 | }
|
---|
62 | catch (ArgumentException) {
|
---|
63 | // try a different size
|
---|
64 | treeSize = random.Next(allowedMinSize, allowedMaxSize);
|
---|
65 | tries = 0;
|
---|
66 | }
|
---|
67 | if (tries++ >= MAX_TRIES) {
|
---|
68 | // try a different size
|
---|
69 | treeSize = random.Next(allowedMinSize, allowedMaxSize);
|
---|
70 | tries = 0;
|
---|
71 | }
|
---|
72 | } while (tree.Root == null || tree.Size > maxTreeSize || tree.Height > maxTreeHeight);
|
---|
73 | return tree;
|
---|
74 | }
|
---|
75 |
|
---|
76 | private Symbol SelectRandomSymbol(IRandom random, IEnumerable<Symbol> symbols) {
|
---|
77 | var symbolList = symbols.ToList();
|
---|
78 | return symbolList[random.Next(symbolList.Count)];
|
---|
79 | }
|
---|
80 |
|
---|
81 |
|
---|
82 | private SymbolicExpressionTreeNode PTC2(IRandom random, ISymbolicExpressionGrammar grammar, Symbol rootSymbol, int size, int maxDepth) {
|
---|
83 | SymbolicExpressionTreeNode root = rootSymbol.CreateTreeNode();
|
---|
84 | if (size <= 1 || maxDepth <= 1) return root;
|
---|
85 | List<object[]> list = new List<object[]>();
|
---|
86 | int currentSize = 1;
|
---|
87 | int totalListMinSize = grammar.MinimalExpressionLength(rootSymbol) - 1;
|
---|
88 |
|
---|
89 | int actualArity = SampleArity(random, grammar, rootSymbol, size);
|
---|
90 | for (int i = 0; i < actualArity; i++) {
|
---|
91 | // insert a dummy sub-tree and add the pending extension to the list
|
---|
92 | root.AddSubTree(null);
|
---|
93 | list.Add(new object[] { root, i, 2 });
|
---|
94 | }
|
---|
95 |
|
---|
96 | // while there are pending extension points and we have not reached the limit of adding new extension points
|
---|
97 | while (list.Count > 0 && totalListMinSize + currentSize < size) {
|
---|
98 | int randomIndex = random.Next(list.Count);
|
---|
99 | object[] nextExtension = list[randomIndex];
|
---|
100 | list.RemoveAt(randomIndex);
|
---|
101 | SymbolicExpressionTreeNode parent = (SymbolicExpressionTreeNode)nextExtension[0];
|
---|
102 | int argumentIndex = (int)nextExtension[1];
|
---|
103 | int extensionDepth = (int)nextExtension[2];
|
---|
104 | if (extensionDepth + grammar.MinimalExpressionDepth(parent.Symbol) >= maxDepth) {
|
---|
105 | parent.RemoveSubTree(argumentIndex);
|
---|
106 | SymbolicExpressionTreeNode branch = CreateMinimalTree(random, grammar, grammar.AllowedSymbols(parent.Symbol, argumentIndex));
|
---|
107 | parent.InsertSubTree(argumentIndex, branch); // insert a smallest possible tree
|
---|
108 | currentSize += branch.GetSize();
|
---|
109 | totalListMinSize -= branch.GetSize();
|
---|
110 | } else {
|
---|
111 | var allowedSubFunctions = from s in grammar.AllowedSymbols(parent.Symbol, argumentIndex)
|
---|
112 | where grammar.MinimalExpressionDepth(parent.Symbol) + extensionDepth - 1 < maxDepth
|
---|
113 | where grammar.MaximalExpressionLength(s) > size - totalListMinSize - currentSize ||
|
---|
114 | totalListMinSize + currentSize >= size * 0.9 // if the necessary size is almost reached then also allow
|
---|
115 | // terminals or terminal-branches
|
---|
116 | select s;
|
---|
117 | Symbol selectedSymbol = SelectRandomSymbol(random, allowedSubFunctions);
|
---|
118 | SymbolicExpressionTreeNode newTree = selectedSymbol.CreateTreeNode();
|
---|
119 | parent.RemoveSubTree(argumentIndex);
|
---|
120 | parent.InsertSubTree(argumentIndex, newTree);
|
---|
121 | currentSize++;
|
---|
122 | totalListMinSize--;
|
---|
123 |
|
---|
124 | actualArity = SampleArity(random, grammar, selectedSymbol, size - currentSize);
|
---|
125 | for (int i = 0; i < actualArity; i++) {
|
---|
126 | // insert a dummy sub-tree and add the pending extension to the list
|
---|
127 | newTree.AddSubTree(null);
|
---|
128 | list.Add(new object[] { newTree, i, extensionDepth + 1 });
|
---|
129 | }
|
---|
130 | totalListMinSize += grammar.MinimalExpressionLength(selectedSymbol);
|
---|
131 | }
|
---|
132 | }
|
---|
133 | // fill all pending extension points
|
---|
134 | while (list.Count > 0) {
|
---|
135 | int randomIndex = random.Next(list.Count);
|
---|
136 | object[] nextExtension = list[randomIndex];
|
---|
137 | list.RemoveAt(randomIndex);
|
---|
138 | SymbolicExpressionTreeNode parent = (SymbolicExpressionTreeNode)nextExtension[0];
|
---|
139 | int a = (int)nextExtension[1];
|
---|
140 | int d = (int)nextExtension[2];
|
---|
141 | parent.RemoveSubTree(a);
|
---|
142 | parent.InsertSubTree(a,
|
---|
143 | CreateMinimalTree(random, grammar, grammar.AllowedSymbols(parent.Symbol, a))); // append a tree with minimal possible height
|
---|
144 | }
|
---|
145 | return root;
|
---|
146 | }
|
---|
147 |
|
---|
148 | private int SampleArity(IRandom random, ISymbolicExpressionGrammar grammar, Symbol symbol, int targetSize) {
|
---|
149 | // select actualArity randomly with the constraint that the sub-trees in the minimal arity can become large enough
|
---|
150 | int minArity = grammar.MinSubTrees(symbol);
|
---|
151 | int maxArity = grammar.MaxSubTrees(symbol);
|
---|
152 | if (maxArity > targetSize) {
|
---|
153 | maxArity = targetSize;
|
---|
154 | }
|
---|
155 | // the min number of sub-trees has to be set to a value that is large enough so that the largest possible tree is at least tree size
|
---|
156 | // if 1..3 trees are possible and the largest possible first sub-tree is smaller larger than the target size then minArity should be at least 2
|
---|
157 | long aggregatedLongestExpressionLength = 0;
|
---|
158 | for (int i = 0; i < maxArity; i++) {
|
---|
159 | aggregatedLongestExpressionLength += (from s in grammar.AllowedSymbols(symbol, i)
|
---|
160 | select grammar.MaximalExpressionLength(s)).Max();
|
---|
161 | if (aggregatedLongestExpressionLength < targetSize) minArity = i;
|
---|
162 | else break;
|
---|
163 | }
|
---|
164 |
|
---|
165 | // the max number of sub-trees has to be set to a value that is small enough so that the smallest possible tree is at most tree size
|
---|
166 | // if 1..3 trees are possible and the smallest possible first sub-tree is already larger than the target size then maxArity should be at most 0
|
---|
167 | long aggregatedShortestExpressionLength = 0;
|
---|
168 | for (int i = 0; i < maxArity; i++) {
|
---|
169 | aggregatedShortestExpressionLength += (from s in grammar.AllowedSymbols(symbol, i)
|
---|
170 | select grammar.MinimalExpressionLength(s)).Min();
|
---|
171 | if (aggregatedShortestExpressionLength > targetSize) {
|
---|
172 | maxArity = i;
|
---|
173 | break;
|
---|
174 | }
|
---|
175 | }
|
---|
176 | if (minArity > maxArity) throw new ArgumentException();
|
---|
177 | return random.Next(minArity, maxArity + 1);
|
---|
178 | }
|
---|
179 |
|
---|
180 | private SymbolicExpressionTreeNode CreateMinimalTree(IRandom random, ISymbolicExpressionGrammar grammar, IEnumerable<Symbol> symbols) {
|
---|
181 | // determine possible symbols that will lead to the smallest possible tree
|
---|
182 | var possibleSymbols = (from s in symbols
|
---|
183 | group s by grammar.MinimalExpressionLength(s) into g
|
---|
184 | orderby g.Key
|
---|
185 | select g).First();
|
---|
186 | var selectedSymbol = SelectRandomSymbol(random, possibleSymbols);
|
---|
187 | // build minimal tree by recursive application
|
---|
188 | var tree = selectedSymbol.CreateTreeNode();
|
---|
189 | for (int i = 0; i < grammar.MinSubTrees(selectedSymbol); i++)
|
---|
190 | tree.AddSubTree(CreateMinimalTree(random, grammar, grammar.AllowedSymbols(selectedSymbol, i)));
|
---|
191 | return tree;
|
---|
192 | }
|
---|
193 |
|
---|
194 | //private bool IsRecursiveExpansionPossible(Symbol symbol) {
|
---|
195 | // return FindCycle(function, new Stack<IFunction>());
|
---|
196 | //}
|
---|
197 |
|
---|
198 | //private Dictionary<IFunction, bool> inCycle = new Dictionary<IFunction, bool>();
|
---|
199 | //private bool FindCycle(IFunction function, Stack<IFunction> functionChain) {
|
---|
200 | // if (inCycle.ContainsKey(function)) {
|
---|
201 | // return inCycle[function];
|
---|
202 | // } else if (IsTerminal(function)) {
|
---|
203 | // inCycle[function] = false;
|
---|
204 | // return false;
|
---|
205 | // } else if (functionChain.Contains(function)) {
|
---|
206 | // inCycle[function] = true;
|
---|
207 | // return true;
|
---|
208 | // } else {
|
---|
209 | // functionChain.Push(function);
|
---|
210 | // bool result = false;
|
---|
211 | // // all slot indexes
|
---|
212 | // for (int i = 0; i < function.MaxSubTrees; i++) {
|
---|
213 | // foreach (IFunction subFunction in GetAllowedSubFunctions(function, i)) {
|
---|
214 | // result |= FindCycle(subFunction, functionChain);
|
---|
215 | // }
|
---|
216 | // }
|
---|
217 |
|
---|
218 | // functionChain.Pop();
|
---|
219 | // inCycle[function] = result;
|
---|
220 | // return result;
|
---|
221 | // }
|
---|
222 | //}
|
---|
223 |
|
---|
224 | }
|
---|
225 | } |
---|