#region License Information /* HeuristicLab * Copyright (C) 2002-2010 Heuristic and Evolutionary Algorithms Laboratory (HEAL) * * This file is part of HeuristicLab. * * HeuristicLab is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * HeuristicLab is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with HeuristicLab. If not, see . */ #endregion using System; using System.Collections.Generic; using System.Linq; using HeuristicLab.Analysis; using HeuristicLab.Core; using HeuristicLab.Data; using HeuristicLab.Optimization; using HeuristicLab.Optimization.Operators; using HeuristicLab.Parameters; using HeuristicLab.Persistence.Default.CompositeSerializers.Storable; using HeuristicLab.PluginInfrastructure; using HeuristicLab.Random; using HeuristicLab.Common; namespace HeuristicLab.Algorithms.OffspringSelectionGeneticAlgorithm { /// /// An offspring selection genetic algorithm. /// [Item("Offspring Selection Genetic Algorithm", "An offspring selection genetic algorithm (Affenzeller, M. et al. 2009. Genetic Algorithms and Genetic Programming - Modern Concepts and Practical Applications. CRC Press).")] [Creatable("Algorithms")] [StorableClass] public sealed class OffspringSelectionGeneticAlgorithm : EngineAlgorithm { #region Problem Properties public override Type ProblemType { get { return typeof(ISingleObjectiveProblem); } } public new ISingleObjectiveProblem Problem { get { return (ISingleObjectiveProblem)base.Problem; } set { base.Problem = value; } } #endregion #region Parameter Properties private ValueParameter SeedParameter { get { return (ValueParameter)Parameters["Seed"]; } } private ValueParameter SetSeedRandomlyParameter { get { return (ValueParameter)Parameters["SetSeedRandomly"]; } } private ValueParameter PopulationSizeParameter { get { return (ValueParameter)Parameters["PopulationSize"]; } } private ConstrainedValueParameter SelectorParameter { get { return (ConstrainedValueParameter)Parameters["Selector"]; } } private ConstrainedValueParameter CrossoverParameter { get { return (ConstrainedValueParameter)Parameters["Crossover"]; } } private ValueParameter MutationProbabilityParameter { get { return (ValueParameter)Parameters["MutationProbability"]; } } private OptionalConstrainedValueParameter MutatorParameter { get { return (OptionalConstrainedValueParameter)Parameters["Mutator"]; } } private ValueParameter ElitesParameter { get { return (ValueParameter)Parameters["Elites"]; } } private ValueParameter MaximumGenerationsParameter { get { return (ValueParameter)Parameters["MaximumGenerations"]; } } private ValueLookupParameter SuccessRatioParameter { get { return (ValueLookupParameter)Parameters["SuccessRatio"]; } } private ValueLookupParameter ComparisonFactorLowerBoundParameter { get { return (ValueLookupParameter)Parameters["ComparisonFactorLowerBound"]; } } private ValueLookupParameter ComparisonFactorUpperBoundParameter { get { return (ValueLookupParameter)Parameters["ComparisonFactorUpperBound"]; } } private OptionalConstrainedValueParameter ComparisonFactorModifierParameter { get { return (OptionalConstrainedValueParameter)Parameters["ComparisonFactorModifier"]; } } private ValueLookupParameter MaximumSelectionPressureParameter { get { return (ValueLookupParameter)Parameters["MaximumSelectionPressure"]; } } private ValueLookupParameter OffspringSelectionBeforeMutationParameter { get { return (ValueLookupParameter)Parameters["OffspringSelectionBeforeMutation"]; } } private ValueLookupParameter SelectedParentsParameter { get { return (ValueLookupParameter)Parameters["SelectedParents"]; } } private ValueParameter AnalyzerParameter { get { return (ValueParameter)Parameters["Analyzer"]; } } #endregion #region Properties public IntValue Seed { get { return SeedParameter.Value; } set { SeedParameter.Value = value; } } public BoolValue SetSeedRandomly { get { return SetSeedRandomlyParameter.Value; } set { SetSeedRandomlyParameter.Value = value; } } public IntValue PopulationSize { get { return PopulationSizeParameter.Value; } set { PopulationSizeParameter.Value = value; } } public ISelector Selector { get { return SelectorParameter.Value; } set { SelectorParameter.Value = value; } } public ICrossover Crossover { get { return CrossoverParameter.Value; } set { CrossoverParameter.Value = value; } } public PercentValue MutationProbability { get { return MutationProbabilityParameter.Value; } set { MutationProbabilityParameter.Value = value; } } public IManipulator Mutator { get { return MutatorParameter.Value; } set { MutatorParameter.Value = value; } } public IntValue Elites { get { return ElitesParameter.Value; } set { ElitesParameter.Value = value; } } public IntValue MaximumGenerations { get { return MaximumGenerationsParameter.Value; } set { MaximumGenerationsParameter.Value = value; } } public DoubleValue SuccessRatio { get { return SuccessRatioParameter.Value; } set { SuccessRatioParameter.Value = value; } } public DoubleValue ComparisonFactorLowerBound { get { return ComparisonFactorLowerBoundParameter.Value; } set { ComparisonFactorLowerBoundParameter.Value = value; } } public DoubleValue ComparisonFactorUpperBound { get { return ComparisonFactorUpperBoundParameter.Value; } set { ComparisonFactorUpperBoundParameter.Value = value; } } public IDiscreteDoubleValueModifier ComparisonFactorModifier { get { return ComparisonFactorModifierParameter.Value; } set { ComparisonFactorModifierParameter.Value = value; } } public DoubleValue MaximumSelectionPressure { get { return MaximumSelectionPressureParameter.Value; } set { MaximumSelectionPressureParameter.Value = value; } } public BoolValue OffspringSelectionBeforeMutation { get { return OffspringSelectionBeforeMutationParameter.Value; } set { OffspringSelectionBeforeMutationParameter.Value = value; } } public IntValue SelectedParents { get { return SelectedParentsParameter.Value; } set { SelectedParentsParameter.Value = value; } } public MultiAnalyzer Analyzer { get { return AnalyzerParameter.Value; } set { AnalyzerParameter.Value = value; } } private RandomCreator RandomCreator { get { return (RandomCreator)OperatorGraph.InitialOperator; } } private SolutionsCreator SolutionsCreator { get { return (SolutionsCreator)RandomCreator.Successor; } } private OffspringSelectionGeneticAlgorithmMainLoop MainLoop { get { return (OffspringSelectionGeneticAlgorithmMainLoop)SolutionsCreator.Successor; } } [Storable] private BestAverageWorstQualityAnalyzer qualityAnalyzer; [Storable] private ValueAnalyzer selectionPressureAnalyzer; #endregion [StorableConstructor] private OffspringSelectionGeneticAlgorithm(bool deserializing) : base(deserializing) { } public OffspringSelectionGeneticAlgorithm() : base() { Parameters.Add(new ValueParameter("Seed", "The random seed used to initialize the new pseudo random number generator.", new IntValue(0))); Parameters.Add(new ValueParameter("SetSeedRandomly", "True if the random seed should be set to a random value, otherwise false.", new BoolValue(true))); Parameters.Add(new ValueParameter("PopulationSize", "The size of the population of solutions.", new IntValue(100))); Parameters.Add(new ConstrainedValueParameter("Selector", "The operator used to select solutions for reproduction.")); Parameters.Add(new ConstrainedValueParameter("Crossover", "The operator used to cross solutions.")); Parameters.Add(new ValueParameter("MutationProbability", "The probability that the mutation operator is applied on a solution.", new PercentValue(0.05))); Parameters.Add(new OptionalConstrainedValueParameter("Mutator", "The operator used to mutate solutions.")); Parameters.Add(new ValueParameter("Elites", "The numer of elite solutions which are kept in each generation.", new IntValue(1))); Parameters.Add(new ValueParameter("MaximumGenerations", "The maximum number of generations which should be processed.", new IntValue(1000))); Parameters.Add(new ValueLookupParameter("SuccessRatio", "The ratio of successful to total children that should be achieved.", new DoubleValue(1))); Parameters.Add(new ValueLookupParameter("ComparisonFactorLowerBound", "The lower bound of the comparison factor (start).", new DoubleValue(0))); Parameters.Add(new ValueLookupParameter("ComparisonFactorUpperBound", "The upper bound of the comparison factor (end).", new DoubleValue(1))); Parameters.Add(new OptionalConstrainedValueParameter("ComparisonFactorModifier", "The operator used to modify the comparison factor.", new ItemSet(new IDiscreteDoubleValueModifier[] { new LinearDiscreteDoubleValueModifier() }), new LinearDiscreteDoubleValueModifier())); Parameters.Add(new ValueLookupParameter("MaximumSelectionPressure", "The maximum selection pressure that terminates the algorithm.", new DoubleValue(100))); Parameters.Add(new ValueLookupParameter("OffspringSelectionBeforeMutation", "True if the offspring selection step should be applied before mutation, false if it should be applied after mutation.", new BoolValue(false))); Parameters.Add(new ValueLookupParameter("SelectedParents", "Should be about 2 * PopulationSize, for large problems use a smaller value to decrease memory footprint.", new IntValue(200))); Parameters.Add(new ValueParameter("Analyzer", "The operator used to analyze each generation.", new MultiAnalyzer())); RandomCreator randomCreator = new RandomCreator(); SolutionsCreator solutionsCreator = new SolutionsCreator(); OffspringSelectionGeneticAlgorithmMainLoop mainLoop = new OffspringSelectionGeneticAlgorithmMainLoop(); OperatorGraph.InitialOperator = randomCreator; randomCreator.RandomParameter.ActualName = "Random"; randomCreator.SeedParameter.ActualName = SeedParameter.Name; randomCreator.SeedParameter.Value = null; randomCreator.SetSeedRandomlyParameter.ActualName = SetSeedRandomlyParameter.Name; randomCreator.SetSeedRandomlyParameter.Value = null; randomCreator.Successor = solutionsCreator; solutionsCreator.NumberOfSolutionsParameter.ActualName = PopulationSizeParameter.Name; solutionsCreator.Successor = mainLoop; mainLoop.SelectorParameter.ActualName = SelectorParameter.Name; mainLoop.CrossoverParameter.ActualName = CrossoverParameter.Name; mainLoop.ElitesParameter.ActualName = ElitesParameter.Name; mainLoop.MaximumGenerationsParameter.ActualName = MaximumGenerationsParameter.Name; mainLoop.MutatorParameter.ActualName = MutatorParameter.Name; mainLoop.MutationProbabilityParameter.ActualName = MutationProbabilityParameter.Name; mainLoop.RandomParameter.ActualName = RandomCreator.RandomParameter.ActualName; mainLoop.ResultsParameter.ActualName = "Results"; foreach (ISelector selector in ApplicationManager.Manager.GetInstances().Where(x => !(x is IMultiObjectiveSelector)).OrderBy(x => x.Name)) SelectorParameter.ValidValues.Add(selector); ISelector proportionalSelector = SelectorParameter.ValidValues.FirstOrDefault(x => x.GetType().Name.Equals("ProportionalSelector")); if (proportionalSelector != null) SelectorParameter.Value = proportionalSelector; ParameterizeSelectors(); foreach (IDiscreteDoubleValueModifier modifier in ApplicationManager.Manager.GetInstances().OrderBy(x => x.Name)) ComparisonFactorModifierParameter.ValidValues.Add(modifier); IDiscreteDoubleValueModifier linearModifier = ComparisonFactorModifierParameter.ValidValues.FirstOrDefault(x => x.GetType().Name.Equals("LinearDiscreteDoubleValueModifier")); if (linearModifier != null) ComparisonFactorModifierParameter.Value = linearModifier; ParameterizeComparisonFactorModifiers(); qualityAnalyzer = new BestAverageWorstQualityAnalyzer(); selectionPressureAnalyzer = new ValueAnalyzer(); ParameterizeAnalyzers(); UpdateAnalyzers(); Initialize(); } public override IDeepCloneable Clone(Cloner cloner) { OffspringSelectionGeneticAlgorithm clone = (OffspringSelectionGeneticAlgorithm)base.Clone(cloner); clone.qualityAnalyzer = (BestAverageWorstQualityAnalyzer)cloner.Clone(qualityAnalyzer); clone.selectionPressureAnalyzer = (ValueAnalyzer)cloner.Clone(selectionPressureAnalyzer); clone.Initialize(); return clone; } public override void Prepare() { if (Problem != null) base.Prepare(); } #region Events protected override void OnProblemChanged() { ParameterizeStochasticOperator(Problem.SolutionCreator); ParameterizeStochasticOperator(Problem.Evaluator); foreach (IOperator op in Problem.Operators) ParameterizeStochasticOperator(op); ParameterizeSolutionsCreator(); ParameterizMainLoop(); ParameterizeSelectors(); ParameterizeAnalyzers(); UpdateCrossovers(); UpdateMutators(); UpdateAnalyzers(); Problem.Evaluator.QualityParameter.ActualNameChanged += new EventHandler(Evaluator_QualityParameter_ActualNameChanged); base.OnProblemChanged(); } protected override void Problem_SolutionCreatorChanged(object sender, EventArgs e) { ParameterizeStochasticOperator(Problem.SolutionCreator); ParameterizeSolutionsCreator(); base.Problem_SolutionCreatorChanged(sender, e); } protected override void Problem_EvaluatorChanged(object sender, EventArgs e) { ParameterizeStochasticOperator(Problem.Evaluator); ParameterizeSolutionsCreator(); ParameterizMainLoop(); ParameterizeSelectors(); ParameterizeAnalyzers(); Problem.Evaluator.QualityParameter.ActualNameChanged += new EventHandler(Evaluator_QualityParameter_ActualNameChanged); base.Problem_EvaluatorChanged(sender, e); } protected override void Problem_OperatorsChanged(object sender, EventArgs e) { foreach (IOperator op in Problem.Operators) ParameterizeStochasticOperator(op); UpdateCrossovers(); UpdateMutators(); UpdateAnalyzers(); base.Problem_OperatorsChanged(sender, e); } private void ElitesParameter_ValueChanged(object sender, EventArgs e) { Elites.ValueChanged += new EventHandler(Elites_ValueChanged); ParameterizeSelectors(); } private void Elites_ValueChanged(object sender, EventArgs e) { ParameterizeSelectors(); } private void PopulationSizeParameter_ValueChanged(object sender, EventArgs e) { PopulationSize.ValueChanged += new EventHandler(PopulationSize_ValueChanged); ParameterizeSelectors(); } private void PopulationSize_ValueChanged(object sender, EventArgs e) { ParameterizeSelectors(); } private void Evaluator_QualityParameter_ActualNameChanged(object sender, EventArgs e) { ParameterizMainLoop(); ParameterizeSelectors(); ParameterizeAnalyzers(); } #endregion #region Helpers [StorableHook(HookType.AfterDeserialization)] private void Initialize() { PopulationSizeParameter.ValueChanged += new EventHandler(PopulationSizeParameter_ValueChanged); PopulationSize.ValueChanged += new EventHandler(PopulationSize_ValueChanged); ElitesParameter.ValueChanged += new EventHandler(ElitesParameter_ValueChanged); Elites.ValueChanged += new EventHandler(Elites_ValueChanged); if (Problem != null) { Problem.Evaluator.QualityParameter.ActualNameChanged += new EventHandler(Evaluator_QualityParameter_ActualNameChanged); } } private void ParameterizeSolutionsCreator() { SolutionsCreator.EvaluatorParameter.ActualName = Problem.EvaluatorParameter.Name; SolutionsCreator.SolutionCreatorParameter.ActualName = Problem.SolutionCreatorParameter.Name; } private void ParameterizMainLoop() { MainLoop.EvaluatorParameter.ActualName = Problem.EvaluatorParameter.Name; MainLoop.MaximizationParameter.ActualName = Problem.MaximizationParameter.Name; MainLoop.QualityParameter.ActualName = Problem.Evaluator.QualityParameter.ActualName; } private void ParameterizeStochasticOperator(IOperator op) { if (op is IStochasticOperator) ((IStochasticOperator)op).RandomParameter.ActualName = RandomCreator.RandomParameter.ActualName; } private void ParameterizeSelectors() { foreach (ISelector selector in SelectorParameter.ValidValues) { selector.CopySelected = new BoolValue(true); selector.NumberOfSelectedSubScopesParameter.Value = null; selector.NumberOfSelectedSubScopesParameter.ActualName = SelectedParentsParameter.Name; ParameterizeStochasticOperator(selector); } if (Problem != null) { foreach (ISingleObjectiveSelector selector in SelectorParameter.ValidValues.OfType()) { selector.MaximizationParameter.ActualName = Problem.MaximizationParameter.Name; selector.QualityParameter.ActualName = Problem.Evaluator.QualityParameter.ActualName; } } } private void ParameterizeAnalyzers() { qualityAnalyzer.ResultsParameter.ActualName = "Results"; selectionPressureAnalyzer.Name = "SelectionPressure Analyzer"; selectionPressureAnalyzer.ResultsParameter.ActualName = "Results"; selectionPressureAnalyzer.ValueParameter.ActualName = "SelectionPressure"; selectionPressureAnalyzer.ValueParameter.Depth = 0; selectionPressureAnalyzer.ValuesParameter.ActualName = "Selection Pressure History"; if (Problem != null) { qualityAnalyzer.MaximizationParameter.ActualName = Problem.MaximizationParameter.Name; qualityAnalyzer.QualityParameter.ActualName = Problem.Evaluator.QualityParameter.ActualName; qualityAnalyzer.BestKnownQualityParameter.ActualName = Problem.BestKnownQualityParameter.Name; } } private void ParameterizeComparisonFactorModifiers() { foreach (IDiscreteDoubleValueModifier modifier in ComparisonFactorModifierParameter.ValidValues) { modifier.IndexParameter.ActualName = "Generations"; modifier.EndIndexParameter.ActualName = MaximumGenerationsParameter.Name; modifier.EndValueParameter.ActualName = ComparisonFactorUpperBoundParameter.Name; modifier.StartIndexParameter.Value = new IntValue(0); modifier.StartValueParameter.ActualName = ComparisonFactorLowerBoundParameter.Name; modifier.ValueParameter.ActualName = "ComparisonFactor"; } } private void UpdateCrossovers() { ICrossover oldCrossover = CrossoverParameter.Value; CrossoverParameter.ValidValues.Clear(); foreach (ICrossover crossover in Problem.Operators.OfType().OrderBy(x => x.Name)) CrossoverParameter.ValidValues.Add(crossover); if (oldCrossover != null) { ICrossover crossover = CrossoverParameter.ValidValues.FirstOrDefault(x => x.GetType() == oldCrossover.GetType()); if (crossover != null) CrossoverParameter.Value = crossover; } } private void UpdateMutators() { IManipulator oldMutator = MutatorParameter.Value; MutatorParameter.ValidValues.Clear(); foreach (IManipulator mutator in Problem.Operators.OfType().OrderBy(x => x.Name)) MutatorParameter.ValidValues.Add(mutator); if (oldMutator != null) { IManipulator mutator = MutatorParameter.ValidValues.FirstOrDefault(x => x.GetType() == oldMutator.GetType()); if (mutator != null) MutatorParameter.Value = mutator; } } private void UpdateAnalyzers() { Analyzer.Operators.Clear(); Analyzer.Operators.Add(qualityAnalyzer); Analyzer.Operators.Add(selectionPressureAnalyzer); if (Problem != null) { foreach (IAnalyzer analyzer in Problem.Operators.OfType().OrderBy(x => x.Name)) { foreach (IScopeTreeLookupParameter param in analyzer.Parameters.OfType()) param.Depth = 1; Analyzer.Operators.Add(analyzer); } } } #endregion } }