#region License Information
/* HeuristicLab
* Copyright (C) 2002-2013 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
*
* This file is part of HeuristicLab.
*
* HeuristicLab is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* HeuristicLab is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with HeuristicLab. If not, see .
*/
#endregion
using System;
using System.Collections.Generic;
using HeuristicLab.Common;
using HeuristicLab.Core;
using HeuristicLab.Data;
using HeuristicLab.Parameters;
using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
namespace HeuristicLab.Algorithms.DataAnalysis {
[StorableClass]
[Item(Name = "CovarianceConst",
Description = "Constant covariance function for Gaussian processes.")]
public sealed class CovarianceConst : ParameterizedNamedItem, ICovarianceFunction {
public IValueParameter ScaleParameter {
get { return (IValueParameter)Parameters["Scale"]; }
}
[StorableConstructor]
private CovarianceConst(bool deserializing)
: base(deserializing) {
}
private CovarianceConst(CovarianceConst original, Cloner cloner)
: base(original, cloner) {
}
public CovarianceConst()
: base() {
Name = ItemName;
Description = ItemDescription;
Parameters.Add(new OptionalValueParameter("Scale", "The scale of the constant covariance function."));
}
public override IDeepCloneable Clone(Cloner cloner) {
return new CovarianceConst(this, cloner);
}
public int GetNumberOfParameters(int numberOfVariables) {
return ScaleParameter.Value != null ? 0 : 1;
}
public void SetParameter(double[] p) {
double scale;
GetParameterValues(p, out scale);
ScaleParameter.Value = new DoubleValue(scale);
}
private void GetParameterValues(double[] p, out double scale) {
int c = 0;
// gather parameter values
if (ScaleParameter.Value != null) {
scale = ScaleParameter.Value.Value;
} else {
scale = Math.Exp(2 * p[c]);
c++;
}
if (p.Length != c) throw new ArgumentException("The length of the parameter vector does not match the number of free parameters for CovarianceConst", "p");
}
public ParameterizedCovarianceFunction GetParameterizedCovarianceFunction(double[] p, IEnumerable columnIndices) {
double scale;
GetParameterValues(p, out scale);
// create functions
var cov = new ParameterizedCovarianceFunction();
cov.Covariance = (x, i, j) => scale;
cov.CrossCovariance = (x, xt, i, j) => scale;
cov.CovarianceGradient = (x, i, j) => GetGradient(x, i, j, scale, columnIndices);
return cov;
}
private static IEnumerable GetGradient(double[,] x, int i, int j, double scale, IEnumerable columnIndices) {
yield return 2.0 * scale;
}
}
}