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source: trunk/HeuristicLab.Problems.DataAnalysis/3.4/Implementation/DataAnalysisProblemData.cs @ 18140

Last change on this file since 18140 was 18034, checked in by chaider, 3 years ago

#3073 Moved VariableRanges from RegressionProblemData to DataAnalysisProblemData to make it also available in classification problems

File size: 10.1 KB
Line 
1#region License Information
2/* HeuristicLab
3 * Copyright (C) Heuristic and Evolutionary Algorithms Laboratory (HEAL)
4 *
5 * This file is part of HeuristicLab.
6 *
7 * HeuristicLab is free software: you can redistribute it and/or modify
8 * it under the terms of the GNU General Public License as published by
9 * the Free Software Foundation, either version 3 of the License, or
10 * (at your option) any later version.
11 *
12 * HeuristicLab is distributed in the hope that it will be useful,
13 * but WITHOUT ANY WARRANTY; without even the implied warranty of
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
15 * GNU General Public License for more details.
16 *
17 * You should have received a copy of the GNU General Public License
18 * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
19 */
20#endregion
21
22using System;
23using System.Collections.Generic;
24using System.Linq;
25using HeuristicLab.Collections;
26using HeuristicLab.Common;
27using HeuristicLab.Core;
28using HeuristicLab.Data;
29using HeuristicLab.Parameters;
30using HEAL.Attic;
31
32namespace HeuristicLab.Problems.DataAnalysis {
33  [StorableType("85AE1542-D563-434F-A760-1D181EFC2101")]
34  public abstract class DataAnalysisProblemData : ParameterizedNamedItem, IDataAnalysisProblemData {
35    protected const string DatasetParameterName = "Dataset";
36    protected const string InputVariablesParameterName = "InputVariables";
37    protected const string TrainingPartitionParameterName = "TrainingPartition";
38    protected const string TestPartitionParameterName = "TestPartition";
39    protected const string TransformationsParameterName = "Transformations";
40    protected const string VariableRangesParameterName = "VariableRanges";
41
42    #region parameter properites
43    //mkommend: inserted parameter caching due to performance reasons
44    private IFixedValueParameter<Dataset> datasetParameter;
45    public IFixedValueParameter<Dataset> DatasetParameter {
46      get {
47        if (datasetParameter == null) datasetParameter = (IFixedValueParameter<Dataset>)Parameters[DatasetParameterName];
48        return datasetParameter;
49      }
50    }
51
52    public IFixedValueParameter<IntervalCollection> VariableRangesParameter => (IFixedValueParameter<IntervalCollection>)Parameters[VariableRangesParameterName];
53    public IntervalCollection VariableRanges => VariableRangesParameter.Value;
54
55    private IFixedValueParameter<ReadOnlyCheckedItemList<StringValue>> inputVariablesParameter;
56    public IFixedValueParameter<ReadOnlyCheckedItemList<StringValue>> InputVariablesParameter {
57      get {
58        if (inputVariablesParameter == null) inputVariablesParameter = (IFixedValueParameter<ReadOnlyCheckedItemList<StringValue>>)Parameters[InputVariablesParameterName];
59        return inputVariablesParameter;
60      }
61    }
62
63    private IFixedValueParameter<IntRange> trainingPartitionParameter;
64    public IFixedValueParameter<IntRange> TrainingPartitionParameter {
65      get {
66        if (trainingPartitionParameter == null) trainingPartitionParameter = (IFixedValueParameter<IntRange>)Parameters[TrainingPartitionParameterName];
67        return trainingPartitionParameter;
68      }
69    }
70
71    private IFixedValueParameter<IntRange> testPartitionParameter;
72    public IFixedValueParameter<IntRange> TestPartitionParameter {
73      get {
74        if (testPartitionParameter == null) testPartitionParameter = (IFixedValueParameter<IntRange>)Parameters[TestPartitionParameterName];
75        return testPartitionParameter;
76      }
77    }
78
79    public IFixedValueParameter<ReadOnlyItemList<ITransformation>> TransformationsParameter {
80      get { return (IFixedValueParameter<ReadOnlyItemList<ITransformation>>)Parameters[TransformationsParameterName]; }
81    }
82    #endregion
83
84    #region properties
85    protected bool isEmpty = false;
86    public bool IsEmpty {
87      get { return isEmpty; }
88    }
89    public IDataset Dataset {
90      get { return DatasetParameter.Value; }
91    }
92    public ICheckedItemList<StringValue> InputVariables {
93      get { return InputVariablesParameter.Value; }
94    }
95    public IEnumerable<string> AllowedInputVariables {
96      get { return InputVariables.CheckedItems.Select(x => x.Value.Value); }
97    }
98
99    public double[,] AllowedInputsTrainingValues {
100      get { return Dataset.ToArray(AllowedInputVariables, TrainingIndices); }
101    }
102
103    public double[,] AllowedInputsTestValues { get { return Dataset.ToArray(AllowedInputVariables, TestIndices); } }
104    public IntRange TrainingPartition {
105      get { return TrainingPartitionParameter.Value; }
106    }
107    public IntRange TestPartition {
108      get { return TestPartitionParameter.Value; }
109    }
110
111    public virtual IEnumerable<int> AllIndices {
112      get { return Enumerable.Range(0, Dataset.Rows); }
113    }
114    public virtual IEnumerable<int> TrainingIndices {
115      get {
116        return Enumerable.Range(TrainingPartition.Start, Math.Max(0, TrainingPartition.End - TrainingPartition.Start))
117                         .Where(IsTrainingSample);
118      }
119    }
120    public virtual IEnumerable<int> TestIndices {
121      get {
122        return Enumerable.Range(TestPartition.Start, Math.Max(0, TestPartition.End - TestPartition.Start))
123           .Where(IsTestSample);
124      }
125    }
126
127    public IEnumerable<ITransformation> Transformations {
128      get { return TransformationsParameter.Value; }
129    }
130
131    public virtual bool IsTrainingSample(int index) {
132      return index >= 0 && index < Dataset.Rows &&
133             TrainingPartition.Start <= index && index < TrainingPartition.End &&
134             (index < TestPartition.Start || TestPartition.End <= index);
135    }
136
137    public virtual bool IsTestSample(int index) {
138      return index >= 0 && index < Dataset.Rows &&
139             TestPartition.Start <= index && index < TestPartition.End;
140    }
141    #endregion
142
143    protected DataAnalysisProblemData(DataAnalysisProblemData original, Cloner cloner)
144      : base(original, cloner) {
145      isEmpty = original.isEmpty;
146      RegisterEventHandlers();
147    }
148    [StorableConstructor]
149    protected DataAnalysisProblemData(StorableConstructorFlag _) : base(_) { }
150
151    [StorableHook(HookType.AfterDeserialization)]
152    private void AfterDeserialization() {
153      if (!Parameters.ContainsKey(TransformationsParameterName)) {
154        Parameters.Add(new FixedValueParameter<ReadOnlyItemList<ITransformation>>(TransformationsParameterName, "", new ItemList<ITransformation>().AsReadOnly()));
155        TransformationsParameter.Hidden = true;
156      }
157      if (!Parameters.ContainsKey(VariableRangesParameterName)) {
158        var variableRanges = Dataset.GetVariableRanges();
159        Parameters.Add(new FixedValueParameter<IntervalCollection>(VariableRangesParameterName, variableRanges));
160      }
161      RegisterEventHandlers();
162    }
163
164    protected DataAnalysisProblemData(IDataset dataset, IEnumerable<string> allowedInputVariables, IEnumerable<ITransformation> transformations = null, IntervalCollection variableRanges = null) {
165      if (dataset == null) throw new ArgumentNullException("The dataset must not be null.");
166      if (allowedInputVariables == null) throw new ArgumentNullException("The allowed input variables must not be null.");
167
168      if (allowedInputVariables.Except(dataset.DoubleVariables).Except(dataset.StringVariables).Any())
169        throw new ArgumentException("All allowed input variables must be present in the dataset and of type double or string.");
170
171      var variables = dataset.VariableNames.Where(variable => dataset.VariableHasType<double>(variable) || dataset.VariableHasType<string>(variable));
172      var inputVariables = new CheckedItemList<StringValue>(variables.Select(x => new StringValue(x).AsReadOnly()));
173      foreach (StringValue x in inputVariables)
174        inputVariables.SetItemCheckedState(x, allowedInputVariables.Contains(x.Value));
175
176      int trainingPartitionStart = 0;
177      int trainingPartitionEnd = dataset.Rows / 2;
178      int testPartitionStart = dataset.Rows / 2;
179      int testPartitionEnd = dataset.Rows;
180
181      var transformationsList = new ItemList<ITransformation>(transformations ?? Enumerable.Empty<ITransformation>());
182
183      Parameters.Add(new FixedValueParameter<Dataset>(DatasetParameterName, "", (Dataset)dataset));
184      Parameters.Add(new FixedValueParameter<ReadOnlyCheckedItemList<StringValue>>(InputVariablesParameterName, "", inputVariables.AsReadOnly()));
185      Parameters.Add(new FixedValueParameter<IntRange>(TrainingPartitionParameterName, "", new IntRange(trainingPartitionStart, trainingPartitionEnd)));
186      Parameters.Add(new FixedValueParameter<IntRange>(TestPartitionParameterName, "", new IntRange(testPartitionStart, testPartitionEnd)));
187      Parameters.Add(new FixedValueParameter<ReadOnlyItemList<ITransformation>>(TransformationsParameterName, "", transformationsList.AsReadOnly()));
188
189      if (variableRanges == null) {
190        variableRanges = Dataset.GetVariableRanges();
191      }
192      Parameters.Add(new FixedValueParameter<IntervalCollection>(VariableRangesParameterName, variableRanges));
193
194      TransformationsParameter.Hidden = true;
195
196      ((ValueParameter<Dataset>)DatasetParameter).ReactOnValueToStringChangedAndValueItemImageChanged = false;
197      RegisterEventHandlers();
198    }
199
200    private void RegisterEventHandlers() {
201      DatasetParameter.ValueChanged += new EventHandler(Parameter_ValueChanged);
202      InputVariables.CheckedItemsChanged += new CollectionItemsChangedEventHandler<IndexedItem<StringValue>>(InputVariables_CheckedItemsChanged);
203      TrainingPartition.ValueChanged += new EventHandler(Parameter_ValueChanged);
204      TestPartition.ValueChanged += new EventHandler(Parameter_ValueChanged);
205      TransformationsParameter.ValueChanged += new EventHandler(Parameter_ValueChanged);
206    }
207
208    private void InputVariables_CheckedItemsChanged(object sender, CollectionItemsChangedEventArgs<IndexedItem<StringValue>> e) {
209      OnChanged();
210    }
211
212    private void Parameter_ValueChanged(object sender, EventArgs e) {
213      OnChanged();
214    }
215
216    public event EventHandler Changed;
217    protected virtual void OnChanged() {
218      var listeners = Changed;
219      if (listeners != null) listeners(this, EventArgs.Empty);
220    }
221  }
222}
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