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source: stable/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Crossovers/SubtreeCrossover.cs @ 13371

Last change on this file since 13371 was 12706, checked in by mkommend, 9 years ago

#2320: Merged r12422, r12423, r12424, r12480, r12481 and r12482 into stable.

File size: 10.7 KB
RevLine 
[645]1#region License Information
2/* HeuristicLab
[12009]3 * Copyright (C) 2002-2015 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
[645]4 *
5 * This file is part of HeuristicLab.
6 *
7 * HeuristicLab is free software: you can redistribute it and/or modify
8 * it under the terms of the GNU General Public License as published by
9 * the Free Software Foundation, either version 3 of the License, or
10 * (at your option) any later version.
11 *
12 * HeuristicLab is distributed in the hope that it will be useful,
13 * but WITHOUT ANY WARRANTY; without even the implied warranty of
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
15 * GNU General Public License for more details.
16 *
17 * You should have received a copy of the GNU General Public License
18 * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
19 */
20#endregion
21
[4068]22using System;
[645]23using System.Collections.Generic;
[4068]24using System.Linq;
[4722]25using HeuristicLab.Common;
[645]26using HeuristicLab.Core;
[3237]27using HeuristicLab.Data;
28using HeuristicLab.Parameters;
[4068]29using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
[12706]30using HeuristicLab.Random;
[645]31
[5499]32namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
[3237]33  /// <summary>
34  /// Takes two parent individuals P0 and P1 each. Selects a random node N0 of P0 and a random node N1 of P1.
35  /// And replaces the branch with root0 N0 in P0 with N1 from P1 if the tree-size limits are not violated.
36  /// When recombination with N0 and N1 would create a tree that is too large or invalid the operator randomly selects new N0 and N1
37  /// until a valid configuration is found.
38  /// </summary> 
[7506]39  [Item("SubtreeSwappingCrossover", "An operator which performs subtree swapping crossover.")]
[3237]40  [StorableClass]
[7506]41  public class SubtreeCrossover : SymbolicExpressionTreeCrossover, ISymbolicExpressionTreeSizeConstraintOperator {
[5499]42    private const string InternalCrossoverPointProbabilityParameterName = "InternalCrossoverPointProbability";
43    private const string MaximumSymbolicExpressionTreeLengthParameterName = "MaximumSymbolicExpressionTreeLength";
44    private const string MaximumSymbolicExpressionTreeDepthParameterName = "MaximumSymbolicExpressionTreeDepth";
[7506]45
[5499]46    #region Parameter Properties
[3237]47    public IValueLookupParameter<PercentValue> InternalCrossoverPointProbabilityParameter {
[5499]48      get { return (IValueLookupParameter<PercentValue>)Parameters[InternalCrossoverPointProbabilityParameterName]; }
[645]49    }
[5499]50    public IValueLookupParameter<IntValue> MaximumSymbolicExpressionTreeLengthParameter {
51      get { return (IValueLookupParameter<IntValue>)Parameters[MaximumSymbolicExpressionTreeLengthParameterName]; }
52    }
53    public IValueLookupParameter<IntValue> MaximumSymbolicExpressionTreeDepthParameter {
54      get { return (IValueLookupParameter<IntValue>)Parameters[MaximumSymbolicExpressionTreeDepthParameterName]; }
55    }
56    #endregion
57    #region Properties
58    public PercentValue InternalCrossoverPointProbability {
59      get { return InternalCrossoverPointProbabilityParameter.ActualValue; }
60    }
61    public IntValue MaximumSymbolicExpressionTreeLength {
62      get { return MaximumSymbolicExpressionTreeLengthParameter.ActualValue; }
63    }
64    public IntValue MaximumSymbolicExpressionTreeDepth {
65      get { return MaximumSymbolicExpressionTreeDepthParameter.ActualValue; }
66    }
67    #endregion
[4722]68    [StorableConstructor]
[7506]69    protected SubtreeCrossover(bool deserializing) : base(deserializing) { }
70    protected SubtreeCrossover(SubtreeCrossover original, Cloner cloner) : base(original, cloner) { }
[3237]71    public SubtreeCrossover()
72      : base() {
[5499]73      Parameters.Add(new ValueLookupParameter<IntValue>(MaximumSymbolicExpressionTreeLengthParameterName, "The maximal length (number of nodes) of the symbolic expression tree."));
74      Parameters.Add(new ValueLookupParameter<IntValue>(MaximumSymbolicExpressionTreeDepthParameterName, "The maximal depth of the symbolic expression tree (a tree with one node has depth = 0)."));
75      Parameters.Add(new ValueLookupParameter<PercentValue>(InternalCrossoverPointProbabilityParameterName, "The probability to select an internal crossover point (instead of a leaf node).", new PercentValue(0.9)));
[3237]76    }
77
[4722]78    public override IDeepCloneable Clone(Cloner cloner) {
79      return new SubtreeCrossover(this, cloner);
80    }
81
[7506]82    public override ISymbolicExpressionTree Crossover(IRandom random,
[5510]83      ISymbolicExpressionTree parent0, ISymbolicExpressionTree parent1) {
[5499]84      return Cross(random, parent0, parent1, InternalCrossoverPointProbability.Value,
85        MaximumSymbolicExpressionTreeLength.Value, MaximumSymbolicExpressionTreeDepth.Value);
[3237]86    }
87
[5510]88    public static ISymbolicExpressionTree Cross(IRandom random,
89      ISymbolicExpressionTree parent0, ISymbolicExpressionTree parent1,
[5549]90      double internalCrossoverPointProbability, int maxTreeLength, int maxTreeDepth) {
[3294]91      // select a random crossover point in the first parent
[5916]92      CutPoint crossoverPoint0;
93      SelectCrossoverPoint(random, parent0, internalCrossoverPointProbability, maxTreeLength, maxTreeDepth, out crossoverPoint0);
[645]94
[5916]95      int childLength = crossoverPoint0.Child != null ? crossoverPoint0.Child.GetLength() : 0;
[5549]96      // calculate the max length and depth that the inserted branch can have
[5916]97      int maxInsertedBranchLength = maxTreeLength - (parent0.Length - childLength);
[7506]98      int maxInsertedBranchDepth = maxTreeDepth - parent0.Root.GetBranchLevel(crossoverPoint0.Parent);
[645]99
[5510]100      List<ISymbolicExpressionTreeNode> allowedBranches = new List<ISymbolicExpressionTreeNode>();
[3997]101      parent1.Root.ForEachNodePostfix((n) => {
[5549]102        if (n.GetLength() <= maxInsertedBranchLength &&
[7506]103            n.GetDepth() <= maxInsertedBranchDepth && crossoverPoint0.IsMatchingPointType(n))
[3997]104          allowedBranches.Add(n);
105      });
[5916]106      // empty branch
[7506]107      if (crossoverPoint0.IsMatchingPointType(null)) allowedBranches.Add(null);
[645]108
[3997]109      if (allowedBranches.Count == 0) {
[3297]110        return parent0;
111      } else {
[3294]112        var selectedBranch = SelectRandomBranch(random, allowedBranches, internalCrossoverPointProbability);
[645]113
[5916]114        if (crossoverPoint0.Child != null) {
115          // manipulate the tree of parent0 in place
116          // replace the branch in tree0 with the selected branch from tree1
117          crossoverPoint0.Parent.RemoveSubtree(crossoverPoint0.ChildIndex);
118          if (selectedBranch != null) {
119            crossoverPoint0.Parent.InsertSubtree(crossoverPoint0.ChildIndex, selectedBranch);
120          }
121        } else {
122          // child is null (additional child should be added under the parent)
123          if (selectedBranch != null) {
124            crossoverPoint0.Parent.AddSubtree(selectedBranch);
125          }
126        }
[3294]127        return parent0;
[645]128      }
129    }
130
[5916]131    private static void SelectCrossoverPoint(IRandom random, ISymbolicExpressionTree parent0, double internalNodeProbability, int maxBranchLength, int maxBranchDepth, out CutPoint crossoverPoint) {
[3997]132      if (internalNodeProbability < 0.0 || internalNodeProbability > 1.0) throw new ArgumentException("internalNodeProbability");
[5686]133      List<CutPoint> internalCrossoverPoints = new List<CutPoint>();
134      List<CutPoint> leafCrossoverPoints = new List<CutPoint>();
[3997]135      parent0.Root.ForEachNodePostfix((n) => {
[7506]136        if (n.SubtreeCount > 0 && n != parent0.Root) {
[12702]137          //avoid linq to reduce memory pressure
138          for (int i = 0; i < n.SubtreeCount; i++) {
139            var child = n.GetSubtree(i);
[5549]140            if (child.GetLength() <= maxBranchLength &&
141                child.GetDepth() <= maxBranchDepth) {
[7506]142              if (child.SubtreeCount > 0)
[5686]143                internalCrossoverPoints.Add(new CutPoint(n, child));
[5367]144              else
[5686]145                leafCrossoverPoints.Add(new CutPoint(n, child));
[5367]146            }
[3997]147          }
[7506]148
[5916]149          // add one additional extension point if the number of sub trees for the symbol is not full
[6803]150          if (n.SubtreeCount < n.Grammar.GetMaximumSubtreeCount(n.Symbol)) {
[5916]151            // empty extension point
[6803]152            internalCrossoverPoints.Add(new CutPoint(n, n.SubtreeCount));
[5916]153          }
[3997]154        }
[7506]155      }
156    );
[5367]157
[3997]158      if (random.NextDouble() < internalNodeProbability) {
159        // select from internal node if possible
160        if (internalCrossoverPoints.Count > 0) {
161          // select internal crossover point or leaf
[5916]162          crossoverPoint = internalCrossoverPoints[random.Next(internalCrossoverPoints.Count)];
[3997]163        } else {
164          // otherwise select external node
[5916]165          crossoverPoint = leafCrossoverPoints[random.Next(leafCrossoverPoints.Count)];
[3997]166        }
167      } else if (leafCrossoverPoints.Count > 0) {
168        // select from leaf crossover point if possible
[5916]169        crossoverPoint = leafCrossoverPoints[random.Next(leafCrossoverPoints.Count)];
[3997]170      } else {
171        // otherwise select internal crossover point
[5916]172        crossoverPoint = internalCrossoverPoints[random.Next(internalCrossoverPoints.Count)];
[645]173      }
174    }
[3237]175
[5510]176    private static ISymbolicExpressionTreeNode SelectRandomBranch(IRandom random, IEnumerable<ISymbolicExpressionTreeNode> branches, double internalNodeProbability) {
[3237]177      if (internalNodeProbability < 0.0 || internalNodeProbability > 1.0) throw new ArgumentException("internalNodeProbability");
[5510]178      List<ISymbolicExpressionTreeNode> allowedInternalBranches;
179      List<ISymbolicExpressionTreeNode> allowedLeafBranches;
[3997]180      if (random.NextDouble() < internalNodeProbability) {
181        // select internal node if possible
182        allowedInternalBranches = (from branch in branches
[7506]183                                   where branch != null && branch.SubtreeCount > 0
[3997]184                                   select branch).ToList();
185        if (allowedInternalBranches.Count > 0) {
[12706]186          return allowedInternalBranches.SampleRandom(random);
187
[3997]188        } else {
189          // no internal nodes allowed => select leaf nodes
190          allowedLeafBranches = (from branch in branches
[7506]191                                 where branch == null || branch.SubtreeCount == 0
[3989]192                                 select branch).ToList();
[12706]193          return allowedLeafBranches.SampleRandom(random);
[3997]194        }
[3237]195      } else {
[3997]196        // select leaf node if possible
197        allowedLeafBranches = (from branch in branches
[7506]198                               where branch == null || branch.SubtreeCount == 0
[3997]199                               select branch).ToList();
200        if (allowedLeafBranches.Count > 0) {
[12706]201          return allowedLeafBranches.SampleRandom(random);
[3997]202        } else {
203          allowedInternalBranches = (from branch in branches
[7506]204                                     where branch != null && branch.SubtreeCount > 0
[3997]205                                     select branch).ToList();
[12706]206          return allowedInternalBranches.SampleRandom(random);
207
[3997]208        }
[3237]209      }
210    }
[645]211  }
212}
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