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source: branches/M5Regression/HeuristicLab.Algorithms.DataAnalysis/3.4/M5Regression/Pruning/BottomUpPruningBase.cs @ 15614

Last change on this file since 15614 was 15614, checked in by bwerth, 6 years ago

#2847 made changes to M5 according to review comments

File size: 6.7 KB
Line 
1#region License Information
2/* HeuristicLab
3 * Copyright (C) 2002-2017 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
4 *
5 * This file is part of HeuristicLab.
6 *
7 * HeuristicLab is free software: you can redistribute it and/or modify
8 * it under the terms of the GNU General Public License as published by
9 * the Free Software Foundation, either version 3 of the License, or
10 * (at your option) any later version.
11 *
12 * HeuristicLab is distributed in the hope that it will be useful,
13 * but WITHOUT ANY WARRANTY; without even the implied warranty of
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
15 * GNU General Public License for more details.
16 *
17 * You should have received a copy of the GNU General Public License
18 * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
19 */
20#endregion
21
22using System.Collections.Generic;
23using System.Linq;
24using System.Threading;
25using HeuristicLab.Common;
26using HeuristicLab.Core;
27using HeuristicLab.Data;
28using HeuristicLab.Parameters;
29using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
30using HeuristicLab.Problems.DataAnalysis;
31
32namespace HeuristicLab.Algorithms.DataAnalysis {
33  public abstract class BottomUpPruningBase : ParameterizedNamedItem, IPruning {
34    private const string PruningStrengthParameterName = "PruningStrength";
35
36    public IFixedValueParameter<DoubleValue> PruningStrengthParameter {
37      get { return (IFixedValueParameter<DoubleValue>)Parameters[PruningStrengthParameterName]; }
38    }
39
40    public double PruningStrength {
41      get { return PruningStrengthParameter.Value.Value; }
42    }
43
44    #region Constructors & Cloning
45    [StorableConstructor]
46    protected BottomUpPruningBase(bool deserializing) : base(deserializing) { }
47    protected BottomUpPruningBase(BottomUpPruningBase original, Cloner cloner) : base(original, cloner) { }
48    protected BottomUpPruningBase() {
49      Parameters.Add(new FixedValueParameter<DoubleValue>(PruningStrengthParameterName, "The strength of the pruning. Higher values force the algorithm to create simpler models", new DoubleValue(4.0)));
50    }
51    #endregion
52
53    public abstract ILeafModel PruningLeafModel(ILeafModel leafModel);
54
55    #region IPruning
56    public int MinLeafSize(IRegressionProblemData pd, ILeafModel leafModel) {
57      return PruningLeafModel(leafModel).MinLeafSize(pd);
58    }
59    #endregion
60
61    internal void Prune(M5TreeModel treeModel, IReadOnlyList<int> trainingRows, IReadOnlyList<int> pruningRows, M5Parameters m5Params, CancellationToken cancellationToken) {
62      var globalStdDev = m5Params.Data.GetDoubleValues(m5Params.TargetVariable, trainingRows).StandardDeviationPop();
63
64      Prune(treeModel.Root, trainingRows, pruningRows, m5Params, new Dictionary<M5NodeModel, int>(), new Dictionary<M5NodeModel, int>(), cancellationToken, globalStdDev);
65    }
66
67    private bool Prune(M5NodeModel node, IReadOnlyList<int> trainingRows, IReadOnlyList<int> pruningRows, M5Parameters m5Params,
68      Dictionary<M5NodeModel, int> modelComplexities, Dictionary<M5NodeModel, int> nodeComplexities,
69      CancellationToken cancellationToken, double globalStdDev) {
70      //build pruning model
71      int numModelParams;
72      var pruningModel = M5StaticUtilities.BuildModel(trainingRows, m5Params, PruningLeafModel(m5Params.LeafModel), cancellationToken, out numModelParams);
73      node.Model = pruningModel;
74      modelComplexities.Add(node, numModelParams);
75
76      if (node.IsLeaf) {
77        nodeComplexities.Add(node, numModelParams);
78        return true;
79      }
80
81      //split training & pruning data
82      IReadOnlyList<int> leftTest, rightTest;
83      M5StaticUtilities.SplitRows(pruningRows, m5Params.Data, node.SplitAttribute, node.SplitValue, out leftTest, out rightTest);
84      IReadOnlyList<int> leftTraining, rightTraining;
85      M5StaticUtilities.SplitRows(trainingRows, m5Params.Data, node.SplitAttribute, node.SplitValue, out leftTraining, out rightTraining);
86
87      //prune children frist
88      var lpruned = Prune(node.Left, leftTraining, leftTest, m5Params, modelComplexities, nodeComplexities, cancellationToken, globalStdDev);
89      var rpruned = Prune(node.Right, rightTraining, rightTest, m5Params, modelComplexities, nodeComplexities, cancellationToken, globalStdDev);
90      nodeComplexities.Add(node, nodeComplexities[node.Left] + nodeComplexities[node.Right] + 1);
91
92      //TODO check if this reduces quality. It reduces training effort (consideraby for some pruningTypes)
93      if (!lpruned && !rpruned) return false;
94
95      //check if pruning will happen on this node
96      if (!DecidePruneNode(node, m5Params, pruningRows, modelComplexities, nodeComplexities, globalStdDev)) return false;
97
98      //convert to leafNode
99      ((IntValue)m5Params.Results[M5TreeModel.NumCurrentLeafsResultName].Value).Value -= node.EnumerateNodes().Count(x => x.IsLeaf) - 1;
100
101      //TODO chack wether removal is beneficial
102      nodeComplexities.Remove(node.Left);
103      nodeComplexities.Remove(node.Right);
104      modelComplexities.Remove(node.Left);
105      modelComplexities.Remove(node.Right);
106
107      node.ToLeaf();
108
109      return true;
110    }
111
112    private bool DecidePruneNode(M5NodeModel node, M5Parameters m5Params, IReadOnlyCollection<int> testRows,
113      IReadOnlyDictionary<M5NodeModel, int> modelComplexities, IReadOnlyDictionary<M5NodeModel, int> nodeComplexities,
114      double globalStdDev) {
115      if (testRows.Count == 0) return true;
116
117      //create regressionProblemdata from pruning data
118      var vars = m5Params.AllowedInputVariables.Concat(new[] {m5Params.TargetVariable}).ToArray();
119      var reducedData = new Dataset(vars, vars.Select(x => m5Params.Data.GetDoubleValues(x, testRows).ToList()));
120      var pd = new RegressionProblemData(reducedData, m5Params.AllowedInputVariables, m5Params.TargetVariable);
121      pd.TrainingPartition.Start = pd.TrainingPartition.End = pd.TestPartition.Start = 0;
122      pd.TestPartition.End = reducedData.Rows;
123
124      //evaluate combined sub nodes and pruning model
125      var rmsModel = node.Model.CreateRegressionSolution(pd).TestRootMeanSquaredError;
126      var rmsSubTree = node.CreateRegressionSolution(pd).TestRootMeanSquaredError;
127
128      //weigh, compare and decide
129      var adjustedRmsModel = rmsModel * PruningFactor(pd.Dataset.Rows, modelComplexities[node]);
130      var adjustedRmsTree = rmsSubTree * PruningFactor(pd.Dataset.Rows, nodeComplexities[node.Left] + nodeComplexities[node.Right] + 1);
131      return adjustedRmsModel <= adjustedRmsTree;
132    }
133
134    private double PruningFactor(int noInstances, int noParams) {
135      return noInstances <= noParams ? 10.0 : (noInstances + PruningStrength * noParams) / (noInstances - PruningStrength * noParams);
136    }
137  }
138}
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