#region License Information
/* HeuristicLab
* Copyright (C) 2002-2014 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
*
* This file is part of HeuristicLab.
*
* HeuristicLab is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* HeuristicLab is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with HeuristicLab. If not, see .
*/
#endregion
using System;
using System.Linq;
using HeuristicLab.Analysis;
using HeuristicLab.Common;
using HeuristicLab.Core;
using HeuristicLab.Data;
using HeuristicLab.Operators;
using HeuristicLab.Optimization;
using HeuristicLab.Parameters;
using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
///
/// An operator that tracks tree lengths of Symbolic Expression Trees
///
[Item("SymbolicExpressionTreeLengthAnalyzer", "An operator that tracks tree lengths of Symbolic Expression Trees")]
[StorableClass]
public sealed class SymbolicExpressionTreeLengthAnalyzer : SingleSuccessorOperator, ISymbolicExpressionTreeAnalyzer {
private const string SymbolicExpressionTreeParameterName = "SymbolicExpressionTree";
private const string MaximumSymbolicExpressionTreeLengthParameterName = "MaximumSymbolicExpressionTreeLength";
private const string SymbolicExpressionTreeLengthsParameterName = "SymbolicExpressionTreeLengthsTable";
private const string SymbolicExpressionTreeLengthsHistoryParameterName = "SymbolicExpressionTreeLengthsHistoryTable";
private const string ResultsParameterName = "Results";
private const string StoreHistoryParameterName = "StoreHistory";
private const string UpdateIntervalParameterName = "UpdateInterval";
private const string UpdateCounterParameterName = "UpdateCounter";
#region Parameter properties
public IScopeTreeLookupParameter SymbolicExpressionTreeParameter {
get { return (IScopeTreeLookupParameter)Parameters[SymbolicExpressionTreeParameterName]; }
}
public ValueLookupParameter SymbolicExpressionTreeLengthsParameter {
get { return (ValueLookupParameter)Parameters[SymbolicExpressionTreeLengthsParameterName]; }
}
public ValueLookupParameter SymbolicExpressionTreeLengthsHistoryParameter {
get { return (ValueLookupParameter)Parameters[SymbolicExpressionTreeLengthsHistoryParameterName]; }
}
public ValueLookupParameter ResultsParameter {
get { return (ValueLookupParameter)Parameters[ResultsParameterName]; }
}
// history
public ValueParameter StoreHistoryParameter {
get { return (ValueParameter)Parameters[StoreHistoryParameterName]; }
}
public ValueParameter UpdateIntervalParameter {
get { return (ValueParameter)Parameters[UpdateIntervalParameterName]; }
}
public ValueParameter UpdateCounterParameter {
get { return (ValueParameter)Parameters[UpdateCounterParameterName]; }
}
#endregion
#region Properties
public bool EnabledByDefault {
get { return true; }
}
public IntValue UpdateInterval {
get { return UpdateIntervalParameter.Value; }
}
public IntValue UpdateCounter {
get { return UpdateCounterParameter.Value; }
}
public BoolValue StoreHistory {
get { return StoreHistoryParameter.Value; }
}
#endregion
[StorableConstructor]
private SymbolicExpressionTreeLengthAnalyzer(bool deserializing) : base(deserializing) { }
private SymbolicExpressionTreeLengthAnalyzer(SymbolicExpressionTreeLengthAnalyzer original, Cloner cloner)
: base(original, cloner) {
}
public override IDeepCloneable Clone(Cloner cloner) {
return new SymbolicExpressionTreeLengthAnalyzer(this, cloner);
}
public SymbolicExpressionTreeLengthAnalyzer()
: base() {
Parameters.Add(new ScopeTreeLookupParameter(SymbolicExpressionTreeParameterName, "The symbolic expression tree whose length should be calculated."));
Parameters.Add(new LookupParameter(MaximumSymbolicExpressionTreeLengthParameterName, "The maximum allowed symbolic expression tree length"));
Parameters.Add(new ValueLookupParameter(SymbolicExpressionTreeLengthsParameterName, "The data table to store the symbolic expression tree lengths."));
Parameters.Add(new ValueLookupParameter(SymbolicExpressionTreeLengthsHistoryParameterName, "The data table to store the symbolic expression tree lengths history."));
Parameters.Add(new ValueLookupParameter(ResultsParameterName, "The results collection where the analysis values should be stored."));
Parameters.Add(new ValueParameter(StoreHistoryParameterName, "True if the tree lengths history of the population should be stored.", new BoolValue(false)));
Parameters.Add(new ValueParameter(UpdateIntervalParameterName, "The interval in which the tree length analysis should be applied.", new IntValue(1)));
Parameters.Add(new ValueParameter(UpdateCounterParameterName, "The value which counts how many times the operator was called since the last update", new IntValue(0)));
SymbolicExpressionTreeLengthsParameter.Hidden = true;
SymbolicExpressionTreeLengthsHistoryParameter.Hidden = true;
ResultsParameter.Hidden = true;
UpdateCounterParameter.Hidden = true;
}
[StorableHook(HookType.AfterDeserialization)]
private void AfterDeserialization() {
// check if all the parameters are present and accounted for
if (!Parameters.ContainsKey(StoreHistoryParameterName)) {
Parameters.Add(new ValueParameter(StoreHistoryParameterName, "True if the tree lengths history of the population should be stored.", new BoolValue(false)));
}
if (!Parameters.ContainsKey(UpdateIntervalParameterName)) {
Parameters.Add(new ValueParameter(UpdateIntervalParameterName, "The interval in which the tree length analysis should be applied.", new IntValue(1)));
}
//necessary code to correct UpdateCounterParameter - type was changed from LookupParameter to ValueParameter
if (Parameters.ContainsKey(UpdateCounterParameterName) && (Parameters[UpdateCounterParameterName] is LookupParameter))
Parameters.Remove(UpdateCounterParameterName);
if (!Parameters.ContainsKey(UpdateCounterParameterName)) {
Parameters.Add(new ValueParameter(UpdateCounterParameterName, "The value which counts how many times the operator was called since the last update", new IntValue(0)));
UpdateCounterParameter.Hidden = true;
}
}
#region IStatefulItem members
public override void InitializeState() {
base.InitializeState();
UpdateCounter.Value = 0;
}
public override void ClearState() {
base.ClearState();
UpdateCounter.Value = 0;
}
#endregion
public override IOperation Apply() {
UpdateCounter.Value++;
// the analyzer runs periodically, every 'updateInterval' times
if (UpdateCounter.Value == UpdateInterval.Value) {
UpdateCounter.Value = 0; // reset counter
// compute all tree lengths and store them in the lengthsTable
var solutions = SymbolicExpressionTreeParameter.ActualValue;
var treeLengthsTable = SymbolicExpressionTreeLengthsParameter.ActualValue;
// if the table was not created yet, we create it here
if (treeLengthsTable == null) {
treeLengthsTable = new DataTable("Tree Length Histogram");
SymbolicExpressionTreeLengthsParameter.ActualValue = treeLengthsTable;
}
// data table which stores tree length values
DataRow treeLengthsTableRow;
const string treeLengthsTableRowName = "Symbolic expression tree lengths";
const string treeLengthsTableRowDesc = "The distribution of symbolic expression tree lengths";
const string xAxisTitle = "Symbolic expression tree lengths";
const string yAxisTitle = "Frequency / Number of tree individuals";
var treeLengths = solutions.Select(s => (int)s.Length).ToList();
int maxLength = treeLengths.Max(t => t);
int minLength = treeLengths.Min(t => t);
if (!treeLengthsTable.Rows.ContainsKey(treeLengthsTableRowName)) {
treeLengthsTableRow = new DataRow(treeLengthsTableRowName, treeLengthsTableRowDesc, treeLengths.Select(x => (double)x));
treeLengthsTable.Rows.Add(treeLengthsTableRow);
} else {
treeLengthsTableRow = treeLengthsTable.Rows[treeLengthsTableRowName];
treeLengthsTableRow.Values.Replace(treeLengths.Select(x => (double)x));
}
double maximumAllowedTreeLength = ((LookupParameter)Parameters[MaximumSymbolicExpressionTreeLengthParameterName]).ActualValue.Value;
treeLengthsTableRow.VisualProperties.ChartType = DataRowVisualProperties.DataRowChartType.Histogram;
treeLengthsTableRow.VisualProperties.ExactBins = false;
int range = maxLength - minLength;
if (range == 0) range = 1;
// the following trick should result in an integer intervalWidth of 1,2,4,...
treeLengthsTableRow.VisualProperties.Bins = range;
if (maxLength <= 25) // [0,25]
treeLengthsTableRow.VisualProperties.ScaleFactor = 1.0;
else if (maxLength <= 100) // [26,100]
treeLengthsTableRow.VisualProperties.ScaleFactor = 1.0 / 2.0;
else if (maxLength <= 250) // [101,250]
treeLengthsTableRow.VisualProperties.ScaleFactor = 1.0 / 5.0;
else if (maxLength <= 500) // [251,500]
treeLengthsTableRow.VisualProperties.ScaleFactor = 1.0 / 10.0;
else
treeLengthsTableRow.VisualProperties.ScaleFactor = 1.0 / 20.0; // [501,inf]
treeLengthsTableRow.VisualProperties.IsVisibleInLegend = false;
// visual properties for the X-axis
treeLengthsTable.VisualProperties.XAxisMinimumAuto = false;
treeLengthsTable.VisualProperties.XAxisMaximumAuto = false;
treeLengthsTable.VisualProperties.XAxisMinimumFixedValue = 0.0;
if (maxLength > maximumAllowedTreeLength + 1)
treeLengthsTable.VisualProperties.XAxisMaximumFixedValue = maxLength + 1; // +1 so the histogram column for the maximum length won't get trimmed
else
treeLengthsTable.VisualProperties.XAxisMaximumFixedValue = maximumAllowedTreeLength + 1;
treeLengthsTable.VisualProperties.XAxisTitle = xAxisTitle;
//visual properties for the Y-axis
treeLengthsTable.VisualProperties.YAxisMinimumAuto = false;
treeLengthsTable.VisualProperties.YAxisMaximumAuto = false;
treeLengthsTable.VisualProperties.YAxisMinimumFixedValue = 0.0;
int maxFreq = (int)Math.Round(solutions.GroupBy(s => s.Length).Max(g => g.Count()) / treeLengthsTableRow.VisualProperties.ScaleFactor);
if (maxFreq % 5 != 0)
maxFreq += (5 - maxFreq % 5);
double yAxisMaximumFixedValue = maxFreq;
treeLengthsTable.VisualProperties.YAxisMaximumFixedValue = yAxisMaximumFixedValue;
treeLengthsTable.VisualProperties.YAxisTitle = yAxisTitle;
var results = ResultsParameter.ActualValue;
if (!results.ContainsKey(treeLengthsTableRowName)) {
results.Add(new Result(treeLengthsTableRowName, treeLengthsTable));
} else {
results[treeLengthsTableRowName].Value = treeLengthsTable;
}
bool storeHistory = StoreHistoryParameter.Value.Value;
const string treeLengthHistoryTableName = "Tree lengths history";
if (storeHistory) {
var treeLengthsHistory = SymbolicExpressionTreeLengthsHistoryParameter.ActualValue;
if (treeLengthsHistory == null) {
treeLengthsHistory = new DataTableHistory();
SymbolicExpressionTreeLengthsHistoryParameter.ActualValue = treeLengthsHistory;
}
treeLengthsHistory.Add((DataTable)treeLengthsTable.Clone());
if (!results.ContainsKey(treeLengthHistoryTableName)) {
results.Add(new Result(treeLengthHistoryTableName, treeLengthsHistory));
} else {
results[treeLengthHistoryTableName].Value = treeLengthsHistory;
}
}
}
return base.Apply();
}
}
}