#region License Information /* HeuristicLab * Copyright (C) 2002-2008 Heuristic and Evolutionary Algorithms Laboratory (HEAL) * * This file is part of HeuristicLab. * * HeuristicLab is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * HeuristicLab is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with HeuristicLab. If not, see . */ #endregion using System; using System.Collections.Generic; using System.Linq; using System.Text; using HeuristicLab.Core; using HeuristicLab.Data; using HeuristicLab.Operators; using HeuristicLab.Functions; using HeuristicLab.DataAnalysis; namespace HeuristicLab.StructureIdentification { public abstract class GPEvaluatorBase : OperatorBase { private IEvaluator evaluator; private int targetVariable; private int start; private int end; private bool useEstimatedValues; private double[] backupValues; private int evaluatedSamples; private double estimatedValueMax; private double estimatedValueMin; private int treeSize; private double totalEvaluatedNodes; protected Dataset dataset; private double targetMean; protected double TargetMean { get { return targetMean; } } public GPEvaluatorBase() : base() { AddVariableInfo(new VariableInfo("FunctionTree", "The function tree that should be evaluated", typeof(IFunctionTree), VariableKind.In)); AddVariableInfo(new VariableInfo("TreeSize", "Size (number of nodes) of the tree to evaluate", typeof(IntData), VariableKind.In)); AddVariableInfo(new VariableInfo("Dataset", "Dataset with all samples on which to apply the function", typeof(Dataset), VariableKind.In)); AddVariableInfo(new VariableInfo("TargetVariable", "Index of the column of the dataset that holds the target variable", typeof(IntData), VariableKind.In)); AddVariableInfo(new VariableInfo("PunishmentFactor", "Punishment factor for invalid estimations", typeof(DoubleData), VariableKind.In)); AddVariableInfo(new VariableInfo("TotalEvaluatedNodes", "Number of evaluated nodes", typeof(DoubleData), VariableKind.In | VariableKind.Out)); AddVariableInfo(new VariableInfo("SamplesStart", "Start index of samples in dataset to evaluate", typeof(IntData), VariableKind.In)); AddVariableInfo(new VariableInfo("SamplesEnd", "End index of samples in dataset to evaluate", typeof(IntData), VariableKind.In)); AddVariableInfo(new VariableInfo("UseEstimatedTargetValue", "Wether to use the original (measured) or the estimated (calculated) value for the targat variable when doing autoregressive modelling", typeof(BoolData), VariableKind.In)); } public override IOperation Apply(IScope scope) { // get all variable values targetVariable = GetVariableValue("TargetVariable", scope, true).Data; dataset = GetVariableValue("Dataset", scope, true); IFunctionTree functionTree = GetVariableValue("FunctionTree", scope, true); double maximumPunishment = GetVariableValue("PunishmentFactor", scope, true).Data * dataset.GetRange(targetVariable); treeSize = scope.GetVariableValue("TreeSize", false).Data; totalEvaluatedNodes = scope.GetVariableValue("TotalEvaluatedNodes", true).Data; int start = GetVariableValue("SamplesStart", scope, true).Data; int end = GetVariableValue("SamplesEnd", scope, true).Data; useEstimatedValues = GetVariableValue("UseEstimatedTargetValue", scope, true).Data; // prepare for autoregressive modelling by saving the original values of the target-variable to a backup array if(useEstimatedValues && (backupValues == null || start != this.start || end != this.end)) { this.start = start; this.end = end; backupValues = new double[end - start]; for(int i = start; i < end; i++) { backupValues[i - start] = dataset.GetValue(i, targetVariable); } } // get the mean of the values of the target variable to determin the max and min bounds of the estimated value targetMean = dataset.GetMean(targetVariable, start, end - 1); estimatedValueMin = targetMean - maximumPunishment; estimatedValueMax = targetMean + maximumPunishment; // initialize and reset the evaluator if(evaluator == null) evaluator = functionTree.CreateEvaluator(); evaluator.ResetEvaluator(functionTree, dataset); evaluatedSamples = 0; Evaluate(start, end); // restore the values of the target variable from the backup array if necessary if(useEstimatedValues) RestoreDataset(dataset, targetVariable, start, end); // update the value of total evaluated nodes scope.GetVariableValue("TotalEvaluatedNodes", true).Data = totalEvaluatedNodes + treeSize * evaluatedSamples; return null; } private void RestoreDataset(Dataset dataset, int targetVariable, int from, int to) { for(int i = from; i < to; i++) { dataset.SetValue(i, targetVariable, backupValues[i - from]); } } public abstract void Evaluate(int start, int end); public void SetOriginalValue(int sample, double value) { if(useEstimatedValues) { dataset.SetValue(sample, targetVariable, value); } } public double GetOriginalValue(int sample) { return dataset.GetValue(sample, targetVariable); } public double GetEstimatedValue(int sample) { evaluatedSamples++; double estimated = evaluator.Evaluate(sample); if(double.IsNaN(estimated) || double.IsInfinity(estimated)) { estimated = estimatedValueMax; } else if(estimated > estimatedValueMax) { estimated = estimatedValueMax; } else if(estimated < estimatedValueMin) { estimated = estimatedValueMin; } return estimated; } } }