[645] | 1 | #region License Information
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| 2 | /* HeuristicLab
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[5445] | 3 | * Copyright (C) 2002-2011 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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[645] | 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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[4068] | 22 | using System;
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[645] | 23 | using System.Collections.Generic;
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[4068] | 24 | using System.Linq;
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[4722] | 25 | using HeuristicLab.Common;
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[645] | 26 | using HeuristicLab.Core;
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[3237] | 27 | using HeuristicLab.Data;
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| 28 | using HeuristicLab.Parameters;
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[4068] | 29 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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[645] | 30 |
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[5499] | 31 | namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
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[3237] | 32 | /// <summary>
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| 33 | /// Takes two parent individuals P0 and P1 each. Selects a random node N0 of P0 and a random node N1 of P1.
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| 34 | /// And replaces the branch with root0 N0 in P0 with N1 from P1 if the tree-size limits are not violated.
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| 35 | /// When recombination with N0 and N1 would create a tree that is too large or invalid the operator randomly selects new N0 and N1
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| 36 | /// until a valid configuration is found.
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| 37 | /// </summary>
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| 38 | [Item("SubtreeCrossover", "An operator which performs subtree swapping crossover.")]
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| 39 | [StorableClass]
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[5499] | 40 | public sealed class SubtreeCrossover : SymbolicExpressionTreeCrossover, ISymbolicExpressionTreeSizeConstraintOperator {
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| 41 | private const string InternalCrossoverPointProbabilityParameterName = "InternalCrossoverPointProbability";
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| 42 | private const string MaximumSymbolicExpressionTreeLengthParameterName = "MaximumSymbolicExpressionTreeLength";
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| 43 | private const string MaximumSymbolicExpressionTreeDepthParameterName = "MaximumSymbolicExpressionTreeDepth";
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| 44 | #region Parameter Properties
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[3237] | 45 | public IValueLookupParameter<PercentValue> InternalCrossoverPointProbabilityParameter {
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[5499] | 46 | get { return (IValueLookupParameter<PercentValue>)Parameters[InternalCrossoverPointProbabilityParameterName]; }
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[645] | 47 | }
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[5499] | 48 | public IValueLookupParameter<IntValue> MaximumSymbolicExpressionTreeLengthParameter {
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| 49 | get { return (IValueLookupParameter<IntValue>)Parameters[MaximumSymbolicExpressionTreeLengthParameterName]; }
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| 50 | }
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| 51 | public IValueLookupParameter<IntValue> MaximumSymbolicExpressionTreeDepthParameter {
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| 52 | get { return (IValueLookupParameter<IntValue>)Parameters[MaximumSymbolicExpressionTreeDepthParameterName]; }
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| 53 | }
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| 54 | #endregion
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| 55 | #region Properties
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| 56 | public PercentValue InternalCrossoverPointProbability {
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| 57 | get { return InternalCrossoverPointProbabilityParameter.ActualValue; }
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| 58 | }
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| 59 | public IntValue MaximumSymbolicExpressionTreeLength {
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| 60 | get { return MaximumSymbolicExpressionTreeLengthParameter.ActualValue; }
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| 61 | }
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| 62 | public IntValue MaximumSymbolicExpressionTreeDepth {
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| 63 | get { return MaximumSymbolicExpressionTreeDepthParameter.ActualValue; }
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| 64 | }
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| 65 | #endregion
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[4722] | 66 | [StorableConstructor]
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| 67 | private SubtreeCrossover(bool deserializing) : base(deserializing) { }
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| 68 | private SubtreeCrossover(SubtreeCrossover original, Cloner cloner) : base(original, cloner) { }
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[3237] | 69 | public SubtreeCrossover()
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| 70 | : base() {
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[5499] | 71 | Parameters.Add(new ValueLookupParameter<IntValue>(MaximumSymbolicExpressionTreeLengthParameterName, "The maximal length (number of nodes) of the symbolic expression tree."));
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| 72 | Parameters.Add(new ValueLookupParameter<IntValue>(MaximumSymbolicExpressionTreeDepthParameterName, "The maximal depth of the symbolic expression tree (a tree with one node has depth = 0)."));
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| 73 | Parameters.Add(new ValueLookupParameter<PercentValue>(InternalCrossoverPointProbabilityParameterName, "The probability to select an internal crossover point (instead of a leaf node).", new PercentValue(0.9)));
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[3237] | 74 | }
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| 75 |
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[4722] | 76 | public override IDeepCloneable Clone(Cloner cloner) {
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| 77 | return new SubtreeCrossover(this, cloner);
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| 78 | }
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| 79 |
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[5510] | 80 | protected override ISymbolicExpressionTree Cross(IRandom random,
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| 81 | ISymbolicExpressionTree parent0, ISymbolicExpressionTree parent1) {
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[5499] | 82 | return Cross(random, parent0, parent1, InternalCrossoverPointProbability.Value,
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| 83 | MaximumSymbolicExpressionTreeLength.Value, MaximumSymbolicExpressionTreeDepth.Value);
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[3237] | 84 | }
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| 85 |
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[5510] | 86 | public static ISymbolicExpressionTree Cross(IRandom random,
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| 87 | ISymbolicExpressionTree parent0, ISymbolicExpressionTree parent1,
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[5549] | 88 | double internalCrossoverPointProbability, int maxTreeLength, int maxTreeDepth) {
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[3294] | 89 | // select a random crossover point in the first parent
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[5916] | 90 | CutPoint crossoverPoint0;
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| 91 | SelectCrossoverPoint(random, parent0, internalCrossoverPointProbability, maxTreeLength, maxTreeDepth, out crossoverPoint0);
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[645] | 92 |
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[5916] | 93 | int childLength = crossoverPoint0.Child != null ? crossoverPoint0.Child.GetLength() : 0;
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[5549] | 94 | // calculate the max length and depth that the inserted branch can have
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[5916] | 95 | int maxInsertedBranchLength = maxTreeLength - (parent0.Length - childLength);
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| 96 | int maxInsertedBranchDepth = maxTreeDepth - GetBranchLevel(parent0.Root, crossoverPoint0.Parent);
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[645] | 97 |
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[5510] | 98 | List<ISymbolicExpressionTreeNode> allowedBranches = new List<ISymbolicExpressionTreeNode>();
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[3997] | 99 | parent1.Root.ForEachNodePostfix((n) => {
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[6284] | 100 | if (!n.Symbol.Fixed &&
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| 101 | n.GetLength() <= maxInsertedBranchLength &&
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| 102 | n.GetDepth() <= maxInsertedBranchDepth &&
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| 103 | IsMatchingPointType(crossoverPoint0, n))
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[3997] | 104 | allowedBranches.Add(n);
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| 105 | });
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[5916] | 106 | // empty branch
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| 107 | if (IsMatchingPointType(crossoverPoint0, null)) allowedBranches.Add(null);
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[645] | 108 |
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[3997] | 109 | if (allowedBranches.Count == 0) {
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[3297] | 110 | return parent0;
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| 111 | } else {
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[3294] | 112 | var selectedBranch = SelectRandomBranch(random, allowedBranches, internalCrossoverPointProbability);
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[645] | 113 |
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[5916] | 114 | if (crossoverPoint0.Child != null) {
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| 115 | // manipulate the tree of parent0 in place
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| 116 | // replace the branch in tree0 with the selected branch from tree1
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| 117 | crossoverPoint0.Parent.RemoveSubtree(crossoverPoint0.ChildIndex);
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| 118 | if (selectedBranch != null) {
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| 119 | crossoverPoint0.Parent.InsertSubtree(crossoverPoint0.ChildIndex, selectedBranch);
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| 120 | }
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| 121 | } else {
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| 122 | // child is null (additional child should be added under the parent)
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| 123 | if (selectedBranch != null) {
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| 124 | crossoverPoint0.Parent.AddSubtree(selectedBranch);
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| 125 | }
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| 126 | }
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[3294] | 127 | return parent0;
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[645] | 128 | }
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| 129 | }
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| 130 |
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[5916] | 131 | private static bool IsMatchingPointType(CutPoint cutPoint, ISymbolicExpressionTreeNode newChild) {
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| 132 | var parent = cutPoint.Parent;
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| 133 | if (newChild == null) {
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| 134 | // make sure that one subtree can be removed and that only the last subtree is removed
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[6387] | 135 | return parent.Grammar.GetMinimumSubtreeCount(parent.Symbol) < parent.SubtreeCount &&
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| 136 | cutPoint.ChildIndex == parent.SubtreeCount - 1;
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[5916] | 137 | } else {
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| 138 | // check syntax constraints of direct parent - child relation
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| 139 | if (!parent.Grammar.ContainsSymbol(newChild.Symbol) ||
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| 140 | !parent.Grammar.IsAllowedChildSymbol(parent.Symbol, newChild.Symbol, cutPoint.ChildIndex)) return false;
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[3338] | 141 |
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[5916] | 142 | bool result = true;
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| 143 | // check point type for the whole branch
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| 144 | newChild.ForEachNodePostfix((n) => {
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| 145 | result =
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| 146 | result &&
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| 147 | parent.Grammar.ContainsSymbol(n.Symbol) &&
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[6387] | 148 | n.SubtreeCount >= parent.Grammar.GetMinimumSubtreeCount(n.Symbol) &&
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| 149 | n.SubtreeCount <= parent.Grammar.GetMaximumSubtreeCount(n.Symbol);
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[5916] | 150 | });
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| 151 | return result;
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| 152 | }
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[3294] | 153 | }
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| 154 |
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[5916] | 155 | private static void SelectCrossoverPoint(IRandom random, ISymbolicExpressionTree parent0, double internalNodeProbability, int maxBranchLength, int maxBranchDepth, out CutPoint crossoverPoint) {
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[3997] | 156 | if (internalNodeProbability < 0.0 || internalNodeProbability > 1.0) throw new ArgumentException("internalNodeProbability");
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[5686] | 157 | List<CutPoint> internalCrossoverPoints = new List<CutPoint>();
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| 158 | List<CutPoint> leafCrossoverPoints = new List<CutPoint>();
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[3997] | 159 | parent0.Root.ForEachNodePostfix((n) => {
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[6284] | 160 | if (!n.Symbol.Fixed && n.Subtrees.Any() && n != parent0.Root) {
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[5733] | 161 | foreach (var child in n.Subtrees) {
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[5549] | 162 | if (child.GetLength() <= maxBranchLength &&
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| 163 | child.GetDepth() <= maxBranchDepth) {
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[5733] | 164 | if (child.Subtrees.Any())
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[5686] | 165 | internalCrossoverPoints.Add(new CutPoint(n, child));
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[5367] | 166 | else
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[5686] | 167 | leafCrossoverPoints.Add(new CutPoint(n, child));
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[5367] | 168 | }
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[3997] | 169 | }
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[5916] | 170 | // add one additional extension point if the number of sub trees for the symbol is not full
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[6387] | 171 | if (n.SubtreeCount < n.Grammar.GetMaximumSubtreeCount(n.Symbol)) {
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[5916] | 172 | // empty extension point
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[6387] | 173 | internalCrossoverPoints.Add(new CutPoint(n, n.SubtreeCount));
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[5916] | 174 | }
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[3997] | 175 | }
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| 176 | });
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[5367] | 177 |
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[3997] | 178 | if (random.NextDouble() < internalNodeProbability) {
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| 179 | // select from internal node if possible
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| 180 | if (internalCrossoverPoints.Count > 0) {
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| 181 | // select internal crossover point or leaf
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[5916] | 182 | crossoverPoint = internalCrossoverPoints[random.Next(internalCrossoverPoints.Count)];
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[3997] | 183 | } else {
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| 184 | // otherwise select external node
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[5916] | 185 | crossoverPoint = leafCrossoverPoints[random.Next(leafCrossoverPoints.Count)];
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[3997] | 186 | }
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| 187 | } else if (leafCrossoverPoints.Count > 0) {
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| 188 | // select from leaf crossover point if possible
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[5916] | 189 | crossoverPoint = leafCrossoverPoints[random.Next(leafCrossoverPoints.Count)];
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[3997] | 190 | } else {
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| 191 | // otherwise select internal crossover point
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[5916] | 192 | crossoverPoint = internalCrossoverPoints[random.Next(internalCrossoverPoints.Count)];
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[645] | 193 | }
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| 194 | }
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[3237] | 195 |
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[5510] | 196 | private static ISymbolicExpressionTreeNode SelectRandomBranch(IRandom random, IEnumerable<ISymbolicExpressionTreeNode> branches, double internalNodeProbability) {
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[3237] | 197 | if (internalNodeProbability < 0.0 || internalNodeProbability > 1.0) throw new ArgumentException("internalNodeProbability");
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[5510] | 198 | List<ISymbolicExpressionTreeNode> allowedInternalBranches;
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| 199 | List<ISymbolicExpressionTreeNode> allowedLeafBranches;
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[3997] | 200 | if (random.NextDouble() < internalNodeProbability) {
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| 201 | // select internal node if possible
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| 202 | allowedInternalBranches = (from branch in branches
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[5916] | 203 | where branch != null && branch.Subtrees.Any()
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[3997] | 204 | select branch).ToList();
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| 205 | if (allowedInternalBranches.Count > 0) {
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| 206 | return allowedInternalBranches.SelectRandom(random);
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| 207 | } else {
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| 208 | // no internal nodes allowed => select leaf nodes
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| 209 | allowedLeafBranches = (from branch in branches
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[5916] | 210 | where branch == null || !branch.Subtrees.Any()
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[3989] | 211 | select branch).ToList();
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[3997] | 212 | return allowedLeafBranches.SelectRandom(random);
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| 213 | }
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[3237] | 214 | } else {
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[3997] | 215 | // select leaf node if possible
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| 216 | allowedLeafBranches = (from branch in branches
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[5916] | 217 | where branch == null || !branch.Subtrees.Any()
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[3997] | 218 | select branch).ToList();
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| 219 | if (allowedLeafBranches.Count > 0) {
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| 220 | return allowedLeafBranches.SelectRandom(random);
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| 221 | } else {
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| 222 | allowedInternalBranches = (from branch in branches
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[5916] | 223 | where branch != null && branch.Subtrees.Any()
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[3997] | 224 | select branch).ToList();
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| 225 | return allowedInternalBranches.SelectRandom(random);
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| 226 | }
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[3237] | 227 | }
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| 228 | }
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| 229 |
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[5499] | 230 | private static int GetBranchLevel(ISymbolicExpressionTreeNode root, ISymbolicExpressionTreeNode point) {
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[3237] | 231 | if (root == point) return 0;
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[5733] | 232 | foreach (var subtree in root.Subtrees) {
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[3237] | 233 | int branchLevel = GetBranchLevel(subtree, point);
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| 234 | if (branchLevel < int.MaxValue) return 1 + branchLevel;
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| 235 | }
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| 236 | return int.MaxValue;
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| 237 | }
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[645] | 238 | }
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| 239 | }
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