#region License Information /* HeuristicLab * Copyright (C) 2002-2010 Heuristic and Evolutionary Algorithms Laboratory (HEAL) * * This file is part of HeuristicLab. * * HeuristicLab is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * HeuristicLab is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with HeuristicLab. If not, see . */ #endregion using System; using System.Collections.Generic; using System.Linq; using HeuristicLab.Common; using HeuristicLab.Core; using HeuristicLab.Data; using HeuristicLab.Parameters; using HeuristicLab.Persistence.Default.CompositeSerializers.Storable; namespace HeuristicLab.Problems.DataAnalysis.Evaluators { /// /// The Variance Accounted For (VAF) function calculates is computed as /// VAF(y,y') = 1 - var(y-y')/var(y) /// where y' denotes the predicted / modelled values for y and var(x) the variance of a signal x. /// public class SimpleVarianceAccountedForEvaluator : SimpleEvaluator { public ILookupParameter VarianceAccountedForParameter { get { return (ILookupParameter)Parameters["VarianceAccountedFor"]; } } [StorableConstructor] protected SimpleVarianceAccountedForEvaluator(bool deserializing) : base(deserializing) { } protected SimpleVarianceAccountedForEvaluator(SimpleVarianceAccountedForEvaluator original, Cloner cloner) : base(original, cloner) { } public SimpleVarianceAccountedForEvaluator() { Parameters.Add(new LookupParameter("VarianceAccountedFor", "The variance of the original values accounted for by the estimated values (VAF(y,y') = 1 - var(y-y') / var(y) ).")); } protected override void Apply(DoubleMatrix values) { var original = from i in Enumerable.Range(0, values.Rows) select values[i, ORIGINAL_INDEX]; var estimated = from i in Enumerable.Range(0, values.Rows) select values[i, ESTIMATION_INDEX]; VarianceAccountedForParameter.ActualValue = new DoubleValue(Calculate(original, estimated)); } public static double Calculate(IEnumerable original, IEnumerable estimated) { var originalEnumerator = original.GetEnumerator(); var estimatedEnumerator = estimated.GetEnumerator(); var errors = new List(); while (originalEnumerator.MoveNext() & estimatedEnumerator.MoveNext()) { double e = estimatedEnumerator.Current; double o = originalEnumerator.Current; if (!double.IsNaN(e) && !double.IsInfinity(e) && !double.IsNaN(o) && !double.IsInfinity(o)) { errors.Add(o - e); } } if (estimatedEnumerator.MoveNext() || originalEnumerator.MoveNext()) { throw new ArgumentException("Number of elements in original and estimated enumeration doesn't match."); } double errorsVariance = errors.Variance(); double originalsVariance = original.Variance(); if (originalsVariance.IsAlmost(0.0)) if (errorsVariance.IsAlmost(0.0)) { return 1.0; } else { return double.MaxValue; } else { return 1.0 - errorsVariance / originalsVariance; } } } }