1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2014 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using HeuristicLab.Data;
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23 | using HeuristicLab.Optimization;
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24 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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25 |
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26 | namespace HeuristicLab.Problems.DataAnalysis {
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27 | [StorableClass]
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28 | public class ClassificationPerformanceMeasuresResultCollection : ResultCollection {
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29 | #region result names
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30 | protected const string ClassificationPositiveClassValueResultName = "Classification positive class";
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31 | protected const string TrainingTruePositiveRateResultName = "True positive rate (training)";
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32 | protected const string TrainingTrueNegativeRateResultName = "True negative rate (training)";
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33 | protected const string TrainingPositivePredictiveValueResultName = "Positive predictive value (training)";
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34 | protected const string TrainingNegativePredictiveValueResultName = "Negative predictive value (training)";
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35 | protected const string TrainingFalsePositiveRateResultName = "False positive rate (training)";
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36 | protected const string TrainingFalseDiscoveryRateResultName = "False discovery rate (training)";
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37 | protected const string TestTruePositiveRateResultName = "True positive rate (test)";
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38 | protected const string TestTrueNegativeRateResultName = "True negative rate (test)";
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39 | protected const string TestPositivePredictiveValueResultName = "Positive predictive value (test)";
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40 | protected const string TestNegativePredictiveValueResultName = "Negative predictive value (test)";
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41 | protected const string TestFalsePositiveRateResultName = "False positive rate (test)";
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42 | protected const string TestFalseDiscoveryRateResultName = "False discovery rate (test)";
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43 | #endregion
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44 |
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45 | public ClassificationPerformanceMeasuresResultCollection()
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46 | : base() {
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47 | AddMeasures();
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48 | }
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49 | [StorableConstructor]
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50 | protected ClassificationPerformanceMeasuresResultCollection(bool deserializing)
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51 | : base(deserializing) {
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52 | }
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53 |
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54 | #region result properties
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55 | public string ClassificationPositiveClassValue {
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56 | get { return ((StringValue)this[ClassificationPositiveClassValueResultName].Value).Value; }
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57 | set { ((StringValue)this[ClassificationPositiveClassValueResultName].Value).Value = value; }
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58 | }
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59 | public double TrainingTruePositiveRate {
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60 | get { return ((DoubleValue)this[TrainingTruePositiveRateResultName].Value).Value; }
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61 | set { ((DoubleValue)this[TrainingTruePositiveRateResultName].Value).Value = value; }
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62 | }
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63 | public double TrainingTrueNegativeRate {
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64 | get { return ((DoubleValue)this[TrainingTrueNegativeRateResultName].Value).Value; }
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65 | set { ((DoubleValue)this[TrainingTrueNegativeRateResultName].Value).Value = value; }
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66 | }
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67 | public double TrainingPositivePredictiveValue {
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68 | get { return ((DoubleValue)this[TrainingPositivePredictiveValueResultName].Value).Value; }
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69 | set { ((DoubleValue)this[TrainingPositivePredictiveValueResultName].Value).Value = value; }
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70 | }
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71 | public double TrainingNegativePredictiveValue {
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72 | get { return ((DoubleValue)this[TrainingNegativePredictiveValueResultName].Value).Value; }
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73 | set { ((DoubleValue)this[TrainingNegativePredictiveValueResultName].Value).Value = value; }
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74 | }
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75 | public double TrainingFalsePositiveRate {
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76 | get { return ((DoubleValue)this[TrainingFalsePositiveRateResultName].Value).Value; }
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77 | set { ((DoubleValue)this[TrainingFalsePositiveRateResultName].Value).Value = value; }
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78 | }
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79 | public double TrainingFalseDiscoveryRate {
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80 | get { return ((DoubleValue)this[TrainingFalseDiscoveryRateResultName].Value).Value; }
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81 | set { ((DoubleValue)this[TrainingFalseDiscoveryRateResultName].Value).Value = value; }
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82 | }
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83 | public double TestTruePositiveRate {
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84 | get { return ((DoubleValue)this[TestTruePositiveRateResultName].Value).Value; }
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85 | set { ((DoubleValue)this[TestTruePositiveRateResultName].Value).Value = value; }
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86 | }
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87 | public double TestTrueNegativeRate {
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88 | get { return ((DoubleValue)this[TestTrueNegativeRateResultName].Value).Value; }
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89 | set { ((DoubleValue)this[TestTrueNegativeRateResultName].Value).Value = value; }
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90 | }
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91 | public double TestPositivePredictiveValue {
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92 | get { return ((DoubleValue)this[TestPositivePredictiveValueResultName].Value).Value; }
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93 | set { ((DoubleValue)this[TestPositivePredictiveValueResultName].Value).Value = value; }
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94 | }
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95 | public double TestNegativePredictiveValue {
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96 | get { return ((DoubleValue)this[TestNegativePredictiveValueResultName].Value).Value; }
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97 | set { ((DoubleValue)this[TestNegativePredictiveValueResultName].Value).Value = value; }
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98 | }
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99 | public double TestFalsePositiveRate {
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100 | get { return ((DoubleValue)this[TestFalsePositiveRateResultName].Value).Value; }
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101 | set { ((DoubleValue)this[TestFalsePositiveRateResultName].Value).Value = value; }
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102 | }
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103 | public double TestFalseDiscoveryRate {
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104 | get { return ((DoubleValue)this[TestFalseDiscoveryRateResultName].Value).Value; }
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105 | set { ((DoubleValue)this[TestFalseDiscoveryRateResultName].Value).Value = value; }
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106 | }
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107 | #endregion
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108 |
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109 | protected void AddMeasures() {
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110 | Add(new Result(ClassificationPositiveClassValueResultName, "The positive class which is used for the performance measure calculations.", new StringValue()));
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111 | Add(new Result(TrainingTruePositiveRateResultName, "Sensitivity/True positive rate of the model on the training partition\n(TP/(TP+FN)).", new PercentValue()));
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112 | Add(new Result(TrainingTrueNegativeRateResultName, "Specificity/True negative rate of the model on the training partition\n(TN/(FP+TN)).", new PercentValue()));
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113 | Add(new Result(TrainingPositivePredictiveValueResultName, "Precision/Positive predictive value of the model on the training partition\n(TP/(TP+FP)).", new PercentValue()));
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114 | Add(new Result(TrainingNegativePredictiveValueResultName, "Negative predictive value of the model on the training partition\n(TN/(TN+FN)).", new PercentValue()));
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115 | Add(new Result(TrainingFalsePositiveRateResultName, "The false positive rate is the complement of the true negative rate of the model on the training partition.", new PercentValue()));
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116 | Add(new Result(TrainingFalseDiscoveryRateResultName, "The false discovery rate is the complement of the positive predictive value of the model on the training partition.", new PercentValue()));
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117 | Add(new Result(TestTruePositiveRateResultName, "Sensitivity/True positive rate of the model on the test partition\n(TP/(TP+FN)).", new PercentValue()));
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118 | Add(new Result(TestTrueNegativeRateResultName, "Specificity/True negative rate of the model on the test partition\n(TN/(FP+TN)).", new PercentValue()));
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119 | Add(new Result(TestPositivePredictiveValueResultName, "Precision/Positive predictive value of the model on the test partition\n(TP/(TP+FP)).", new PercentValue()));
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120 | Add(new Result(TestNegativePredictiveValueResultName, "Negative predictive value of the model on the test partition\n(TN/(TN+FN)).", new PercentValue()));
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121 | Add(new Result(TestFalsePositiveRateResultName, "The false positive rate is the complement of the true negative rate of the model on the test partition.", new PercentValue()));
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122 | Add(new Result(TestFalseDiscoveryRateResultName, "The false discovery rate is the complement of the positive predictive value of the model on the test partition.", new PercentValue()));
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123 | TrainingTruePositiveRate = double.NaN;
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124 | TrainingTrueNegativeRate = double.NaN;
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125 | TrainingPositivePredictiveValue = double.NaN;
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126 | TrainingNegativePredictiveValue = double.NaN;
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127 | TrainingFalsePositiveRate = double.NaN;
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128 | TrainingFalseDiscoveryRate = double.NaN;
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129 | TestTruePositiveRate = double.NaN;
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130 | TestTrueNegativeRate = double.NaN;
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131 | TestPositivePredictiveValue = double.NaN;
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132 | TestNegativePredictiveValue = double.NaN;
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133 | TestFalsePositiveRate = double.NaN;
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134 | TestFalseDiscoveryRate = double.NaN;
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135 | }
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136 | }
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137 | }
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