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source: branches/2971_named_intervals/HeuristicLab.Problems.DataAnalysis.Symbolic.Regression/3.4/SingleObjective/Evaluators/SymbolicRegressionSingleObjectivePearsonRSquaredEvaluator.cs @ 16628

Last change on this file since 16628 was 16628, checked in by gkronber, 5 years ago

#2971: made branch compile with current version of trunk

File size: 4.7 KB
Line 
1#region License Information
2/* HeuristicLab
3 * Copyright (C) 2002-2018 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
4 *
5 * This file is part of HeuristicLab.
6 *
7 * HeuristicLab is free software: you can redistribute it and/or modify
8 * it under the terms of the GNU General Public License as published by
9 * the Free Software Foundation, either version 3 of the License, or
10 * (at your option) any later version.
11 *
12 * HeuristicLab is distributed in the hope that it will be useful,
13 * but WITHOUT ANY WARRANTY; without even the implied warranty of
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
15 * GNU General Public License for more details.
16 *
17 * You should have received a copy of the GNU General Public License
18 * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
19 */
20#endregion
21
22using System.Collections.Generic;
23using HeuristicLab.Common;
24using HeuristicLab.Core;
25using HeuristicLab.Data;
26using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
27using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
28using HEAL.Attic;
29
30namespace HeuristicLab.Problems.DataAnalysis.Symbolic.Regression {
31  [Item("Pearson R² Evaluator", "Calculates the square of the pearson correlation coefficient (also known as coefficient of determination) of a symbolic regression solution.")]
32  [StorableType("B51CED22-72CA-4CA2-8521-7A3130CD38F9")]
33  public class SymbolicRegressionSingleObjectivePearsonRSquaredEvaluator : SymbolicRegressionSingleObjectiveEvaluator {
34    [StorableConstructor]
35    protected SymbolicRegressionSingleObjectivePearsonRSquaredEvaluator(StorableConstructorFlag _) : base(_) { }
36    protected SymbolicRegressionSingleObjectivePearsonRSquaredEvaluator(SymbolicRegressionSingleObjectivePearsonRSquaredEvaluator original, Cloner cloner)
37      : base(original, cloner) {
38    }
39    public override IDeepCloneable Clone(Cloner cloner) {
40      return new SymbolicRegressionSingleObjectivePearsonRSquaredEvaluator(this, cloner);
41    }
42
43    public SymbolicRegressionSingleObjectivePearsonRSquaredEvaluator() : base() { }
44
45    public override bool Maximization { get { return true; } }
46
47    public override IOperation InstrumentedApply() {
48      var solution = SymbolicExpressionTreeParameter.ActualValue;
49      IEnumerable<int> rows = GenerateRowsToEvaluate();
50
51      double quality = Calculate(SymbolicDataAnalysisTreeInterpreterParameter.ActualValue, solution, EstimationLimitsParameter.ActualValue.Lower, EstimationLimitsParameter.ActualValue.Upper, ProblemDataParameter.ActualValue, rows, ApplyLinearScalingParameter.ActualValue.Value);
52      QualityParameter.ActualValue = new DoubleValue(quality);
53
54      return base.InstrumentedApply();
55    }
56
57    public static double Calculate(ISymbolicDataAnalysisExpressionTreeInterpreter interpreter, ISymbolicExpressionTree solution, double lowerEstimationLimit, double upperEstimationLimit, IRegressionProblemData problemData, IEnumerable<int> rows, bool applyLinearScaling) {
58      IEnumerable<double> estimatedValues = interpreter.GetSymbolicExpressionTreeValues(solution, problemData.Dataset, rows);
59      IEnumerable<double> targetValues = problemData.Dataset.GetDoubleValues(problemData.TargetVariable, rows);
60      OnlineCalculatorError errorState;
61
62      double r;
63      if (applyLinearScaling) {
64        var rCalculator = new OnlinePearsonsRCalculator();
65        CalculateWithScaling(targetValues, estimatedValues, lowerEstimationLimit, upperEstimationLimit, rCalculator, problemData.Dataset.Rows);
66        errorState = rCalculator.ErrorState;
67        r = rCalculator.R;
68      } else {
69        IEnumerable<double> boundedEstimatedValues = estimatedValues.LimitToRange(lowerEstimationLimit, upperEstimationLimit);
70        r = OnlinePearsonsRCalculator.Calculate(targetValues, boundedEstimatedValues, out errorState);
71      }
72      if (errorState != OnlineCalculatorError.None) return double.NaN;
73      return r*r;
74    }
75
76    public override double Evaluate(IExecutionContext context, ISymbolicExpressionTree tree, IRegressionProblemData problemData, IEnumerable<int> rows) {
77      SymbolicDataAnalysisTreeInterpreterParameter.ExecutionContext = context;
78      EstimationLimitsParameter.ExecutionContext = context;
79      ApplyLinearScalingParameter.ExecutionContext = context;
80
81      double r2 = Calculate(SymbolicDataAnalysisTreeInterpreterParameter.ActualValue, tree, EstimationLimitsParameter.ActualValue.Lower, EstimationLimitsParameter.ActualValue.Upper, problemData, rows, ApplyLinearScalingParameter.ActualValue.Value);
82
83      SymbolicDataAnalysisTreeInterpreterParameter.ExecutionContext = null;
84      EstimationLimitsParameter.ExecutionContext = null;
85      ApplyLinearScalingParameter.ExecutionContext = null;
86
87      return r2;
88    }
89  }
90}
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