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source: branches/2839_HiveProjectManagement/HeuristicLab.DataPreprocessing/3.4/Content/DataGridContent.cs @ 16057

Last change on this file since 16057 was 16057, checked in by jkarder, 6 years ago

#2839:

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1#region License Information
2/* HeuristicLab
3 * Copyright (C) 2002-2018 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
4 *
5 * This file is part of HeuristicLab.
6 *
7 * HeuristicLab is free software: you can redistribute it and/or modify
8 * it under the terms of the GNU General Public License as published by
9 * the Free Software Foundation, either version 3 of the License, or
10 * (at your option) any later version.
11 *
12 * HeuristicLab is distributed in the hope that it will be useful,
13 * but WITHOUT ANY WARRANTY; without even the implied warranty of
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
15 * GNU General Public License for more details.
16 *
17 * You should have received a copy of the GNU General Public License
18 * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
19 */
20#endregion
21
22using System;
23using System.Collections.Generic;
24using System.Drawing;
25using System.Linq;
26using HeuristicLab.Common;
27using HeuristicLab.Core;
28using HeuristicLab.Data;
29using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
30using HeuristicLab.Random;
31
32namespace HeuristicLab.DataPreprocessing {
33  [Item("Data Grid", "Represents a data grid.")]
34  [StorableClass]
35  public class DataGridContent : PreprocessingContent, IStringConvertibleMatrix, IViewShortcut {
36    public static new Image StaticItemImage {
37      get { return HeuristicLab.Common.Resources.VSImageLibrary.Table; }
38    }
39
40    public int Rows {
41      get { return PreprocessingData.Rows; }
42      set { }
43    }
44
45    public int Columns {
46      get { return PreprocessingData.Columns; }
47      set { }
48    }
49
50    public IEnumerable<string> ColumnNames {
51      get { return PreprocessingData.VariableNames; }
52      set { }
53    }
54
55    public IEnumerable<string> RowNames {
56      get { return Enumerable.Range(1, Rows).Select(n => n.ToString()); }
57      set { throw new NotSupportedException(); }
58    }
59
60    public bool SortableView {
61      get { return true; }
62      set { throw new NotSupportedException(); }
63    }
64
65    public bool ReadOnly {
66      get { return false; }
67    }
68
69    public IDictionary<int, IList<int>> Selection {
70      get { return PreprocessingData.Selection; }
71      set { PreprocessingData.Selection = value; }
72    }
73
74    #region Constructor, Cloning & Persistence
75    public DataGridContent(IFilteredPreprocessingData preprocessingData)
76      : base(preprocessingData) {
77    }
78
79    public DataGridContent(DataGridContent original, Cloner cloner)
80      : base(original, cloner) {
81    }
82    public override IDeepCloneable Clone(Cloner cloner) {
83      return new DataGridContent(this, cloner);
84    }
85
86    [StorableConstructor]
87    protected DataGridContent(bool deserializing)
88      : base(deserializing) { }
89    #endregion
90
91    public void DeleteRows(IEnumerable<int> rows) {
92      PreprocessingData.DeleteRowsWithIndices(rows);
93    }
94
95    public void DeleteColumn(int column) {
96      PreprocessingData.DeleteColumn(column);
97    }
98
99    public bool Validate(string value, out string errorMessage, int columnIndex) {
100      return PreprocessingData.Validate(value, out errorMessage, columnIndex);
101    }
102
103    public string GetValue(int rowIndex, int columnIndex) {
104      return PreprocessingData.GetCellAsString(columnIndex, rowIndex);
105    }
106
107    public bool SetValue(string value, int rowIndex, int columnIndex) {
108      return PreprocessingData.SetValue(value, columnIndex, rowIndex);
109    }
110
111    public event DataPreprocessingChangedEventHandler Changed {
112      add { PreprocessingData.Changed += value; }
113      remove { PreprocessingData.Changed -= value; }
114    }
115
116    #region unused stuff/not implemented but necessary due to IStringConvertibleMatrix
117#pragma warning disable 0067
118    // Is not used since DataGridContentView overrides dataGridView_CellValidating and uses
119    // DataGridLogic#Validate(string value, out string errorMessage, int columnIndex)
120    public bool Validate(string value, out string errorMessage) {
121      errorMessage = string.Empty;
122      return true;
123    }
124
125    public event EventHandler ColumnsChanged;
126    public event EventHandler RowsChanged;
127    public event EventHandler ColumnNamesChanged;
128    public event EventHandler RowNamesChanged;
129    public event EventHandler SortableViewChanged;
130    public event EventHandler<EventArgs<int, int>> ItemChanged;
131    public event EventHandler Reset;
132#pragma warning restore 0067
133    #endregion
134
135    #region Manipulations
136    private void ReplaceIndicesByValue(IDictionary<int, IList<int>> cells, Func<int, double> doubleAggregator = null,
137      Func<int, DateTime> dateTimeAggregator = null, Func<int, string> stringAggregator = null) {
138      PreprocessingData.InTransaction(() => {
139        foreach (var column in cells) {
140          if (doubleAggregator != null && PreprocessingData.VariableHasType<double>(column.Key)) {
141            var value = doubleAggregator(column.Key);
142            foreach (int index in column.Value)
143              PreprocessingData.SetCell<double>(column.Key, index, value);
144          } else if (dateTimeAggregator != null && PreprocessingData.VariableHasType<DateTime>(column.Key)) {
145            var value = dateTimeAggregator(column.Key);
146            foreach (int index in column.Value)
147              PreprocessingData.SetCell<DateTime>(column.Key, index, value);
148          } else if (stringAggregator != null && PreprocessingData.VariableHasType<string>(column.Key)) {
149            var value = stringAggregator(column.Key);
150            foreach (int index in column.Value)
151              PreprocessingData.SetCell<string>(column.Key, index, value);
152          }
153        }
154      });
155    }
156
157    private void ReplaceIndicesByValues(IDictionary<int, IList<int>> cells, Func<int, IEnumerable<double>> doubleAggregator = null,
158      Func<int, IEnumerable<DateTime>> dateTimeAggregator = null, Func<int, IEnumerable<string>> stringAggregator = null) {
159      PreprocessingData.InTransaction(() => {
160        foreach (var column in cells) {
161          if (doubleAggregator != null && PreprocessingData.VariableHasType<double>(column.Key)) {
162            var values = doubleAggregator(column.Key);
163            foreach (var pair in column.Value.Zip(values, (row, value) => new { row, value }))
164              PreprocessingData.SetCell<double>(column.Key, pair.row, pair.value);
165          } else if (dateTimeAggregator != null && PreprocessingData.VariableHasType<DateTime>(column.Key)) {
166            var values = dateTimeAggregator(column.Key);
167            foreach (var pair in column.Value.Zip(values, (row, value) => new { row, value }))
168              PreprocessingData.SetCell<DateTime>(column.Key, pair.row, pair.value);
169          } else if (stringAggregator != null && PreprocessingData.VariableHasType<string>(column.Key)) {
170            var values = stringAggregator(column.Key);
171            foreach (var pair in column.Value.Zip(values, (row, value) => new { row, value }))
172              PreprocessingData.SetCell<string>(column.Key, pair.row, pair.value);
173          }
174        }
175      });
176    }
177
178    public void ReplaceIndicesByMean(IDictionary<int, IList<int>> cells, bool considerSelection = false) {
179      ReplaceIndicesByValue(cells,
180        col => PreprocessingData.GetMean<double>(col, considerSelection),
181        col => PreprocessingData.GetMean<DateTime>(col, considerSelection));
182    }
183
184    public void ReplaceIndicesByMedianValue(IDictionary<int, IList<int>> cells, bool considerSelection = false) {
185      ReplaceIndicesByValue(cells,
186        col => PreprocessingData.GetMedian<double>(col, considerSelection),
187        col => PreprocessingData.GetMedian<DateTime>(col, considerSelection));
188    }
189
190    public void ReplaceIndicesByMode(IDictionary<int, IList<int>> cells, bool considerSelection = false) {
191      ReplaceIndicesByValue(cells,
192        col => PreprocessingData.GetMode<double>(col, considerSelection),
193        col => PreprocessingData.GetMode<DateTime>(col, considerSelection),
194        col => PreprocessingData.GetMode<string>(col, considerSelection));
195    }
196
197    public void ReplaceIndicesByRandomValue(IDictionary<int, IList<int>> cells, bool considerSelection = false) {
198      var rand = new FastRandom();
199      ReplaceIndicesByValues(cells,
200        col => {
201          double min = PreprocessingData.GetMin<double>(col, considerSelection);
202          double max = PreprocessingData.GetMax<double>(col, considerSelection);
203          double range = max - min;
204          return cells[col].Select(_ => rand.NextDouble() * range + min);
205        },
206        col => {
207          var min = PreprocessingData.GetMin<DateTime>(col, considerSelection);
208          var max = PreprocessingData.GetMax<DateTime>(col, considerSelection);
209          double range = (max - min).TotalSeconds;
210          return cells[col].Select(_ => min + TimeSpan.FromSeconds(rand.NextDouble() * range));
211        });
212    }
213
214    public void ReplaceIndicesByString(IDictionary<int, IList<int>> cells, string value) {
215      PreprocessingData.InTransaction(() => {
216        foreach (var column in cells) {
217          foreach (var rowIdx in column.Value) {
218            PreprocessingData.SetValue(value, column.Key, rowIdx);
219          }
220        }
221      });
222    }
223
224
225    public void ReplaceIndicesByLinearInterpolationOfNeighbours(IDictionary<int, IList<int>> cells) {
226      PreprocessingData.InTransaction(() => {
227        foreach (var column in cells) {
228          IList<Tuple<int, int>> startEndings = GetStartAndEndingsForInterpolation(column);
229          foreach (var tuple in startEndings) {
230            Interpolate(column, tuple.Item1, tuple.Item2);
231          }
232        }
233      });
234    }
235
236    private List<Tuple<int, int>> GetStartAndEndingsForInterpolation(KeyValuePair<int, IList<int>> column) {
237      var startEndings = new List<Tuple<int, int>>();
238      var rowIndices = column.Value.OrderBy(x => x).ToList();
239      var count = rowIndices.Count;
240      int start = int.MinValue;
241      for (int i = 0; i < count; ++i) {
242        if (start == int.MinValue) {
243          start = IndexOfPrevPresentValue(column.Key, rowIndices[i]);
244        }
245        if (i + 1 == count || (i + 1 < count && rowIndices[i + 1] - rowIndices[i] > 1)) {
246          int next = IndexOfNextPresentValue(column.Key, rowIndices[i]);
247          if (start > 0 && next < PreprocessingData.Rows) {
248            startEndings.Add(new Tuple<int, int>(start, next));
249          }
250          start = int.MinValue;
251        }
252      }
253      return startEndings;
254    }
255
256    private void Interpolate(KeyValuePair<int, IList<int>> column, int prevIndex, int nextIndex) {
257      int valuesToInterpolate = nextIndex - prevIndex;
258
259      if (PreprocessingData.VariableHasType<double>(column.Key)) {
260        double prev = PreprocessingData.GetCell<double>(column.Key, prevIndex);
261        double next = PreprocessingData.GetCell<double>(column.Key, nextIndex);
262        double interpolationStep = (next - prev) / valuesToInterpolate;
263
264        for (int i = prevIndex; i < nextIndex; ++i) {
265          double interpolated = prev + (interpolationStep * (i - prevIndex));
266          PreprocessingData.SetCell<double>(column.Key, i, interpolated);
267        }
268      } else if (PreprocessingData.VariableHasType<DateTime>(column.Key)) {
269        DateTime prev = PreprocessingData.GetCell<DateTime>(column.Key, prevIndex);
270        DateTime next = PreprocessingData.GetCell<DateTime>(column.Key, nextIndex);
271        double interpolationStep = (next - prev).TotalSeconds / valuesToInterpolate;
272
273        for (int i = prevIndex; i < nextIndex; ++i) {
274          DateTime interpolated = prev.AddSeconds(interpolationStep * (i - prevIndex));
275          PreprocessingData.SetCell<DateTime>(column.Key, i, interpolated);
276        }
277      }
278    }
279
280    private int IndexOfPrevPresentValue(int columnIndex, int start) {
281      int offset = start - 1;
282      while (offset >= 0 && PreprocessingData.IsCellEmpty(columnIndex, offset)) {
283        offset--;
284      }
285
286      return offset;
287    }
288
289    private int IndexOfNextPresentValue(int columnIndex, int start) {
290      int offset = start + 1;
291      while (offset < PreprocessingData.Rows && PreprocessingData.IsCellEmpty(columnIndex, offset)) {
292        offset++;
293      }
294
295      return offset;
296    }
297
298    public void Shuffle(bool shuffleRangesSeparately) {
299      var random = new FastRandom();
300
301      if (shuffleRangesSeparately) {
302        var ranges = new[] { PreprocessingData.TestPartition, PreprocessingData.TrainingPartition };
303        PreprocessingData.InTransaction(() => {
304          // process all given ranges - e.g. TrainingPartition, TestPartition
305          foreach (IntRange range in ranges) {
306            var indices = Enumerable.Range(0, PreprocessingData.Rows).ToArray();
307            var shuffledIndices = Enumerable.Range(range.Start, range.Size).Shuffle(random).ToArray();
308            for (int i = range.Start, j = 0; i < range.End; i++, j++)
309              indices[i] = shuffledIndices[j];
310
311            ReOrderToIndices(indices);
312          }
313        });
314
315      } else {
316        PreprocessingData.InTransaction(() => {
317          var indices = Enumerable.Range(0, PreprocessingData.Rows).ToArray();
318          indices.ShuffleInPlace(random);
319          ReOrderToIndices(indices);
320        });
321      }
322    }
323
324    public void ReOrderToIndices(int[] indices) {
325      PreprocessingData.InTransaction(() => {
326        for (int i = 0; i < PreprocessingData.Columns; ++i) {
327          if (PreprocessingData.VariableHasType<double>(i))
328            ReOrderToIndices<double>(i, indices);
329          else if (PreprocessingData.VariableHasType<string>(i))
330            ReOrderToIndices<string>(i, indices);
331          else if (PreprocessingData.VariableHasType<DateTime>(i))
332            ReOrderToIndices<DateTime>(i, indices);
333        }
334      });
335    }
336
337    private void ReOrderToIndices<T>(int columnIndex, int[] indices) {
338      var originalData = new List<T>(PreprocessingData.GetValues<T>(columnIndex));
339      if (indices.Length != originalData.Count) throw new InvalidOperationException("The number of provided indices does not match the values.");
340
341      for (int i = 0; i < indices.Length; i++) {
342        T newValue = originalData[indices[i]];
343        PreprocessingData.SetCell<T>(columnIndex, i, newValue);
344      }
345    }
346    #endregion
347  }
348}
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