[8623] | 1 |
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| 2 | #region License Information
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| 3 | /* HeuristicLab
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[16057] | 4 | * Copyright (C) 2002-2018 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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[8623] | 5 | *
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| 6 | * This file is part of HeuristicLab.
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| 7 | *
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| 8 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 9 | * it under the terms of the GNU General Public License as published by
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| 10 | * the Free Software Foundation, either version 3 of the License, or
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| 11 | * (at your option) any later version.
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| 12 | *
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| 13 | * HeuristicLab is distributed in the hope that it will be useful,
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| 14 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 15 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 16 | * GNU General Public License for more details.
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| 17 | *
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| 18 | * You should have received a copy of the GNU General Public License
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| 19 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 20 | */
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| 21 | #endregion
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| 22 |
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| 23 | using System;
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[9096] | 24 | using System.Linq;
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[8623] | 25 | using HeuristicLab.Common;
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| 26 | using HeuristicLab.Core;
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[13205] | 27 | using HeuristicLab.Data;
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[8623] | 28 | using HeuristicLab.Optimization;
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| 29 | using HeuristicLab.Parameters;
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| 30 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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[9096] | 31 | using HeuristicLab.PluginInfrastructure;
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[8623] | 32 | using HeuristicLab.Problems.DataAnalysis;
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| 33 |
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| 34 | namespace HeuristicLab.Algorithms.DataAnalysis {
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| 35 | /// <summary>
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| 36 | /// Gaussian process least-squares classification data analysis algorithm.
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| 37 | /// </summary>
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| 38 | [Item("Gaussian Process Least-Squares Classification", "Gaussian process least-squares classification data analysis algorithm.")]
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[12504] | 39 | [Creatable(CreatableAttribute.Categories.DataAnalysisClassification, Priority = 160)]
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[8623] | 40 | [StorableClass]
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[9096] | 41 | public sealed class GaussianProcessClassification : GaussianProcessBase, IStorableContent {
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[8623] | 42 | public string Filename { get; set; }
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| 43 |
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| 44 | public override Type ProblemType { get { return typeof(IClassificationProblem); } }
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| 45 | public new IClassificationProblem Problem {
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| 46 | get { return (IClassificationProblem)base.Problem; }
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| 47 | set { base.Problem = value; }
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| 48 | }
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| 49 |
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[9096] | 50 | private const string ModelParameterName = "Model";
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[13205] | 51 | private const string CreateSolutionParameterName = "CreateSolution";
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[8623] | 52 |
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| 53 | #region parameter properties
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[9098] | 54 | public IConstrainedValueParameter<IGaussianProcessClassificationModelCreator> GaussianProcessModelCreatorParameter {
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[9096] | 55 | get { return (IConstrainedValueParameter<IGaussianProcessClassificationModelCreator>)Parameters[ModelCreatorParameterName]; }
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[8623] | 56 | }
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[9098] | 57 | public IFixedValueParameter<GaussianProcessClassificationSolutionCreator> GaussianProcessSolutionCreatorParameter {
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[9096] | 58 | get { return (IFixedValueParameter<GaussianProcessClassificationSolutionCreator>)Parameters[SolutionCreatorParameterName]; }
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[8623] | 59 | }
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[13205] | 60 | public IFixedValueParameter<BoolValue> CreateSolutionParameter {
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| 61 | get { return (IFixedValueParameter<BoolValue>)Parameters[CreateSolutionParameterName]; }
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| 62 | }
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[8623] | 63 | #endregion
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[13205] | 64 | #region properties
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| 65 | public bool CreateSolution {
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| 66 | get { return CreateSolutionParameter.Value.Value; }
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| 67 | set { CreateSolutionParameter.Value.Value = value; }
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| 68 | }
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| 69 | #endregion
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[8623] | 70 |
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| 71 | [StorableConstructor]
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| 72 | private GaussianProcessClassification(bool deserializing) : base(deserializing) { }
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| 73 | private GaussianProcessClassification(GaussianProcessClassification original, Cloner cloner)
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| 74 | : base(original, cloner) {
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[9096] | 75 | RegisterEventHandlers();
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[8623] | 76 | }
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| 77 | public GaussianProcessClassification()
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[9096] | 78 | : base(new ClassificationProblem()) {
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[8623] | 79 | this.name = ItemName;
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| 80 | this.description = ItemDescription;
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| 81 |
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[9096] | 82 | var modelCreators = ApplicationManager.Manager.GetInstances<IGaussianProcessClassificationModelCreator>();
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| 83 | var defaultModelCreator = modelCreators.First(c => c is GaussianProcessClassificationModelCreator);
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[8623] | 84 |
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[9096] | 85 | // GP regression and classification algorithms only differ in the model and solution creators,
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| 86 | // thus we use a common base class and use operator parameters to implement the specific versions.
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| 87 | // Different model creators can be implemented,
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| 88 | // but the solution creator is implemented in a generic fashion already and we don't allow derived solution creators
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| 89 | Parameters.Add(new ConstrainedValueParameter<IGaussianProcessClassificationModelCreator>(ModelCreatorParameterName, "The operator to create the Gaussian process model.",
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| 90 | new ItemSet<IGaussianProcessClassificationModelCreator>(modelCreators), defaultModelCreator));
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| 91 | // this parameter is not intended to be changed,
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| 92 | Parameters.Add(new FixedValueParameter<GaussianProcessClassificationSolutionCreator>(SolutionCreatorParameterName, "The solution creator for the algorithm",
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| 93 | new GaussianProcessClassificationSolutionCreator()));
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| 94 | Parameters[SolutionCreatorParameterName].Hidden = true;
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[13205] | 95 | // TODO: it would be better to deactivate the solution creator when this parameter is changed
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| 96 | Parameters.Add(new FixedValueParameter<BoolValue>(CreateSolutionParameterName, "Flag that indicates if a solution should be produced at the end of the run", new BoolValue(true)));
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| 97 | Parameters[CreateSolutionParameterName].Hidden = true;
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[8623] | 98 |
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[9096] | 99 | ParameterizedModelCreators();
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[9098] | 100 | ParameterizeSolutionCreator(GaussianProcessSolutionCreatorParameter.Value);
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[9096] | 101 | RegisterEventHandlers();
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| 102 | }
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[8623] | 103 |
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| 104 |
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[9096] | 105 | [StorableHook(HookType.AfterDeserialization)]
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| 106 | private void AfterDeserialization() {
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[13205] | 107 | // BackwardsCompatibility3.3
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| 108 | #region Backwards compatible code, remove with 3.4
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| 109 | if (!Parameters.ContainsKey(CreateSolutionParameterName)) {
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| 110 | Parameters.Add(new FixedValueParameter<BoolValue>(CreateSolutionParameterName, "Flag that indicates if a solution should be produced at the end of the run", new BoolValue(true)));
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| 111 | Parameters[CreateSolutionParameterName].Hidden = true;
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| 112 | }
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| 113 | #endregion
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[9096] | 114 | RegisterEventHandlers();
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| 115 | }
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[8623] | 116 |
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[9096] | 117 | public override IDeepCloneable Clone(Cloner cloner) {
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| 118 | return new GaussianProcessClassification(this, cloner);
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| 119 | }
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[8623] | 120 |
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[9096] | 121 | #region events
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| 122 | private void RegisterEventHandlers() {
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[9098] | 123 | GaussianProcessModelCreatorParameter.ValueChanged += ModelCreatorParameter_ValueChanged;
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[9096] | 124 | }
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[8623] | 125 |
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[9096] | 126 | private void ModelCreatorParameter_ValueChanged(object sender, EventArgs e) {
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[9098] | 127 | ParameterizedModelCreator(GaussianProcessModelCreatorParameter.Value);
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[9096] | 128 | }
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| 129 | #endregion
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[8623] | 130 |
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[9096] | 131 | private void ParameterizedModelCreators() {
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[9098] | 132 | foreach (var creator in GaussianProcessModelCreatorParameter.ValidValues) {
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[9096] | 133 | ParameterizedModelCreator(creator);
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| 134 | }
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| 135 | }
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[8623] | 136 |
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[9096] | 137 | private void ParameterizedModelCreator(IGaussianProcessClassificationModelCreator modelCreator) {
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[8623] | 138 | modelCreator.ProblemDataParameter.ActualName = Problem.ProblemDataParameter.Name;
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| 139 | modelCreator.MeanFunctionParameter.ActualName = MeanFunctionParameterName;
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| 140 | modelCreator.CovarianceFunctionParameter.ActualName = CovarianceFunctionParameterName;
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| 141 |
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[9096] | 142 | // parameter names fixed by the algorithm
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| 143 | modelCreator.ModelParameter.ActualName = ModelParameterName;
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| 144 | modelCreator.HyperparameterParameter.ActualName = HyperparameterParameterName;
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| 145 | modelCreator.HyperparameterGradientsParameter.ActualName = HyperparameterGradientsParameterName;
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| 146 | modelCreator.NegativeLogLikelihoodParameter.ActualName = NegativeLogLikelihoodParameterName;
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| 147 | }
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[8623] | 148 |
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[9096] | 149 | private void ParameterizeSolutionCreator(GaussianProcessClassificationSolutionCreator solutionCreator) {
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| 150 | solutionCreator.ModelParameter.ActualName = ModelParameterName;
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[8623] | 151 | solutionCreator.ProblemDataParameter.ActualName = Problem.ProblemDataParameter.Name;
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| 152 | }
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| 153 | }
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| 154 | }
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